RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 FLI1Q01543 452 aaPredicted RBP7.97□□□□□ -1.13
LIG3-203ENST00000585370 C16orf54Q6UWD8 224 aa7.97□□□□□ -1.13
LIG3-203ENST00000585370 TMEM75Q8N9X5 138 aa7.97□□□□□ -1.13
LIG3-203ENST00000585370 MRPL53Q96EL3 112 aaKnown RBP7.97□□□□□ -1.13
LIG3-203ENST00000585370 FAM210BQ96KR6 192 aa7.97□□□□□ -1.13
LIG3-203ENST00000585370 PGPEP1LA6NFU8 196 aa7.96□□□□□ -1.14
LIG3-203ENST00000585370 DIRC3C9JPN6 131 aa7.96□□□□□ -1.14
LIG3-203ENST00000585370 H3BTX0 84 aa7.96□□□□□ -1.14
LIG3-203ENST00000585370 K7EN84 100 aa7.96□□□□□ -1.14
LIG3-203ENST00000585370 IGHV3-11P01762 117 aa7.96□□□□□ -1.14
LIG3-203ENST00000585370 RNASE1P07998 156 aaKnown RBP7.96□□□□□ -1.14
LIG3-203ENST00000585370 LGALS1P09382 135 aaKnown RBP7.96□□□□□ -1.14
LIG3-203ENST00000585370 MGST1P10620 155 aaKnown RBP7.96□□□□□ -1.14
LIG3-203ENST00000585370 GNG5P63218 68 aa7.96□□□□□ -1.14
LIG3-203ENST00000585370 SAMD13Q5VXD3 122 aa7.96□□□□□ -1.14
LIG3-203ENST00000585370 TMEM183AQ8IXX5 376 aa7.96□□□□□ -1.14
LIG3-203ENST00000585370 EXOC3-AS1Q8N2X6 119 aa7.96□□□□□ -1.14
LIG3-203ENST00000585370 C17orf77Q96MU5 243 aa7.96□□□□□ -1.14
LIG3-203ENST00000585370 ZNF331Q9NQX6 463 aaPredicted RBP7.96□□□□□ -1.14
LIG3-203ENST00000585370 AURKAIP1Q9NWT8 199 aaPredicted RBP7.96□□□□□ -1.14
LIG3-203ENST00000585370 IL36BQ9NZH7 164 aa7.96□□□□□ -1.14
LIG3-203ENST00000585370 ZNF492Q9P255 531 aa7.96□□□□□ -1.14
LIG3-203ENST00000585370 UFC1Q9Y3C8 167 aa7.96□□□□□ -1.14
LIG3-203ENST00000585370 SMAD5-AS1Q9Y6J3 95 aa7.96□□□□□ -1.14
LIG3-203ENST00000585370 URGCP-MRPS24S4R325 110 aa7.96□□□□□ -1.14
LIG3-203ENST00000585370 TRAV34A0A0B4J273 112 aa7.95□□□□□ -1.14
LIG3-203ENST00000585370 TYMSP04818 313 aa7.95□□□□□ -1.14
LIG3-203ENST00000585370 SNRPCP09234 159 aaKnown RBP7.95□□□□□ -1.14
LIG3-203ENST00000585370 RPS10P46783 165 aaKnown RBP7.95□□□□□ -1.14
LIG3-203ENST00000585370 PSG3Q16557 428 aa7.95□□□□□ -1.14
LIG3-203ENST00000585370 RPEL1Q2QD12 228 aa7.95□□□□□ -1.14
LIG3-203ENST00000585370 TMEM95Q3KNT9 176 aa7.95□□□□□ -1.14
LIG3-203ENST00000585370 COX19Q49B96 90 aa7.95□□□□□ -1.14
LIG3-203ENST00000585370 SAPCD1Q5SSQ6 148 aa7.95□□□□□ -1.14
LIG3-203ENST00000585370 IBA57Q5T440 356 aaKnown RBP7.95□□□□□ -1.14
LIG3-203ENST00000585370 GOLT1AQ6ZVE7 132 aa7.95□□□□□ -1.14
LIG3-203ENST00000585370 LINC00479Q96M42 142 aa7.95□□□□□ -1.14
LIG3-203ENST00000585370 MLST8Q9BVC4 326 aa7.95□□□□□ -1.14
LIG3-203ENST00000585370 SRD5A3Q9H8P0 318 aa7.95□□□□□ -1.14
LIG3-203ENST00000585370 DAZ1Q9NQZ3 744 aaKnown RBP7.95□□□□□ -1.14
LIG3-203ENST00000585370 SERTAD4Q9NUC0 356 aa7.95□□□□□ -1.14
LIG3-203ENST00000585370 TGIF2-C20orf24A0A0A6YYL0 155 aa7.94□□□□□ -1.14
LIG3-203ENST00000585370 IGHV7-4-1A0A0J9YVY3 117 aa7.94□□□□□ -1.14
LIG3-203ENST00000585370 ZNF320A2RRD8 509 aa7.94□□□□□ -1.14
LIG3-203ENST00000585370 RBAKDNA6NC62 111 aa7.94□□□□□ -1.14
LIG3-203ENST00000585370 FAM181BA6NEQ2 426 aa7.94□□□□□ -1.14
LIG3-203ENST00000585370 LGALS9O00182 355 aa7.94□□□□□ -1.14
LIG3-203ENST00000585370 SLC17A3O00476 420 aa7.94□□□□□ -1.14
LIG3-203ENST00000585370 GATCO43716 136 aaKnown RBP7.94□□□□□ -1.14
LIG3-203ENST00000585370 TRBV12-3P01733 135 aa7.94□□□□□ -1.14
LIG3-203ENST00000585370 CXCL1P09341 107 aa7.94□□□□□ -1.14
LIG3-203ENST00000585370 CDX1P47902 265 aaPredicted RBP7.94□□□□□ -1.14
LIG3-203ENST00000585370 OR5I1Q13606 314 aa7.94□□□□□ -1.14
LIG3-203ENST00000585370 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.94□□□□□ -1.14
LIG3-203ENST00000585370 REC114Q7Z4M0 266 aa7.94□□□□□ -1.14
LIG3-203ENST00000585370 GLMPQ8WWB7 406 aa7.94□□□□□ -1.14
LIG3-203ENST00000585370 DAZAP1Q96EP5 407 aaKnown RBP7.94□□□□□ -1.14
LIG3-203ENST00000585370 SMPXQ9UHP9 88 aa7.94□□□□□ -1.14
LIG3-203ENST00000585370 RPH3ALQ9UNE2 315 aa7.94□□□□□ -1.14
LIG3-203ENST00000585370 PSG8Q9UQ74 426 aa7.94□□□□□ -1.14
LIG3-203ENST00000585370 V9GYV3 84 aa7.94□□□□□ -1.14
LIG3-203ENST00000585370 IGHV3OR16-8A0A075B7F1 116 aa7.93□□□□□ -1.14
LIG3-203ENST00000585370 ZNF705GA8MUZ8 300 aaPredicted RBP7.93□□□□□ -1.14
LIG3-203ENST00000585370 IGLV2-11P01706 119 aa7.93□□□□□ -1.14
LIG3-203ENST00000585370 RPLP1P05386 114 aaKnown RBP7.93□□□□□ -1.14
LIG3-203ENST00000585370 FAM3BP58499 235 aaPredicted RBP7.93□□□□□ -1.14
LIG3-203ENST00000585370 CT83Q5H943 113 aa7.93□□□□□ -1.14
LIG3-203ENST00000585370 LCN12Q6JVE5 192 aa7.93□□□□□ -1.14
LIG3-203ENST00000585370 Q6ZSV7 163 aa7.93□□□□□ -1.14
LIG3-203ENST00000585370 COX8CQ7Z4L0 72 aa7.93□□□□□ -1.14
LIG3-203ENST00000585370 Q86TA4 180 aa7.93□□□□□ -1.14
LIG3-203ENST00000585370 KLHDC1Q8N7A1 406 aa7.93□□□□□ -1.14
LIG3-203ENST00000585370 OR4B1Q8NGF8 309 aa7.93□□□□□ -1.14
LIG3-203ENST00000585370 C16orf95Q9H693 158 aa7.93□□□□□ -1.14
LIG3-203ENST00000585370 A0A1W2PPQ1 181 aa7.92□□□□□ -1.14
LIG3-203ENST00000585370 FAM231BA6NCW3 169 aa7.92□□□□□ -1.14
LIG3-203ENST00000585370 ZNF207O43670 478 aaKnown RBP7.92□□□□□ -1.14
LIG3-203ENST00000585370 APOHP02749 345 aaPredicted RBP7.92□□□□□ -1.14
LIG3-203ENST00000585370 UNQ9165/PRO28630Q6UXU0 137 aa7.92□□□□□ -1.14
LIG3-203ENST00000585370 LCNL1Q6ZST4 164 aa7.92□□□□□ -1.14
LIG3-203ENST00000585370 PRNTQ86SH4 94 aa7.92□□□□□ -1.14
LIG3-203ENST00000585370 NUDT10Q8NFP7 164 aa7.92□□□□□ -1.14
LIG3-203ENST00000585370 NUDT11Q96G61 164 aa7.92□□□□□ -1.14
LIG3-203ENST00000585370 RHPN1-AS1Q9BWJ2 59 aa7.92□□□□□ -1.14
LIG3-203ENST00000585370 SMIM27A0A1W2PRY6 76 aa7.91□□□□□ -1.14
LIG3-203ENST00000585370 A8MWL6 223 aa7.91□□□□□ -1.14
LIG3-203ENST00000585370 A8MWP6 167 aa7.91□□□□□ -1.14
LIG3-203ENST00000585370 M0R3E3 92 aa7.91□□□□□ -1.14
LIG3-203ENST00000585370 CHEK1O14757 476 aa7.91□□□□□ -1.14
LIG3-203ENST00000585370 P01737 135 aa7.91□□□□□ -1.14
LIG3-203ENST00000585370 CT45A10P0DMU9 189 aa7.91□□□□□ -1.14
LIG3-203ENST00000585370 DEFA6Q01524 100 aa7.91□□□□□ -1.14
LIG3-203ENST00000585370 C8orf86Q6ZUL3 223 aa7.91□□□□□ -1.14
LIG3-203ENST00000585370 C4orf3Q8WVX3 66 aa7.91□□□□□ -1.14
LIG3-203ENST00000585370 NDFIP1Q9BT67 221 aa7.91□□□□□ -1.14
LIG3-203ENST00000585370 RNASE7Q9H1E1 156 aaKnown RBP7.91□□□□□ -1.14
LIG3-203ENST00000585370 PPP1R14DQ9NXH3 145 aa7.91□□□□□ -1.14
LIG3-203ENST00000585370 IGHV3OR16-13A0A075B7E8 117 aa7.9□□□□□ -1.14
LIG3-203ENST00000585370 IGHV3-74A0A0B4J1X5 117 aa7.9□□□□□ -1.14
LIG3-203ENST00000585370 IGHV3-66A0A0C4DH42 116 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms