RNA–Protein interactions for RNA: ENST00000585229.1

SMCHD1-212, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-212ENST00000585229 H3BTX0 84 aa7.41□□□□□ -1.22
SMCHD1-212ENST00000585229 K7EQG2 157 aa7.41□□□□□ -1.22
SMCHD1-212ENST00000585229 IGLV1-51P01701 117 aa7.41□□□□□ -1.22
SMCHD1-212ENST00000585229 ATP5G3P48201 142 aa7.41□□□□□ -1.22
SMCHD1-212ENST00000585229 UBE2G2P60604 165 aa7.41□□□□□ -1.22
SMCHD1-212ENST00000585229 SRSF3P84103 164 aaKnown RBP7.41□□□□□ -1.22
SMCHD1-212ENST00000585229 PSG9Q00887 426 aa7.41□□□□□ -1.22
SMCHD1-212ENST00000585229 PEA15Q15121 130 aa7.41□□□□□ -1.22
SMCHD1-212ENST00000585229 ZNF124Q15973 351 aa7.41□□□□□ -1.22
SMCHD1-212ENST00000585229 DYNLRB2Q8TF09 96 aa7.41□□□□□ -1.22
SMCHD1-212ENST00000585229 DCANP1Q8TF63 244 aa7.41□□□□□ -1.22
SMCHD1-212ENST00000585229 BLNKQ8WV28 456 aa7.41□□□□□ -1.22
SMCHD1-212ENST00000585229 MRPL53Q96EL3 112 aaKnown RBP7.41□□□□□ -1.22
SMCHD1-212ENST00000585229 Q9H3A6 140 aa7.41□□□□□ -1.22
SMCHD1-212ENST00000585229 PLA2G2DQ9UNK4 145 aa7.41□□□□□ -1.22
SMCHD1-212ENST00000585229 CMYA5Q8N3K9 4069 aa7.4□□□□□ -1.22
SMCHD1-212ENST00000585229 C9JQL5 133 aa7.4□□□□□ -1.22
SMCHD1-212ENST00000585229 F6UZH7 168 aa7.4□□□□□ -1.22
SMCHD1-212ENST00000585229 TMEM250H0YL14 139 aa7.4□□□□□ -1.22
SMCHD1-212ENST00000585229 PDE6DO43924 150 aa7.4□□□□□ -1.22
SMCHD1-212ENST00000585229 SRP19P09132 144 aaKnown RBP7.4□□□□□ -1.22
SMCHD1-212ENST00000585229 SNRPCP09234 159 aaKnown RBP7.4□□□□□ -1.22
SMCHD1-212ENST00000585229 INSL3P51460 131 aa7.4□□□□□ -1.22
SMCHD1-212ENST00000585229 KRTAP21-3Q3LHN1 58 aa7.4□□□□□ -1.22
SMCHD1-212ENST00000585229 TMEM61Q8N0U2 210 aa7.4□□□□□ -1.22
SMCHD1-212ENST00000585229 C5orf17Q8NAS9 161 aa7.4□□□□□ -1.22
SMCHD1-212ENST00000585229 RXFP4Q8TDU9 374 aa7.4□□□□□ -1.22
SMCHD1-212ENST00000585229 EIF5A2Q9GZV4 153 aaKnown RBP7.4□□□□□ -1.22
SMCHD1-212ENST00000585229 MS4A6AQ9H2W1 248 aa7.4□□□□□ -1.22
SMCHD1-212ENST00000585229 PRELID1Q9Y255 219 aa7.4□□□□□ -1.22
SMCHD1-212ENST00000585229 PGPA6NDG6 321 aa7.39□□□□□ -1.23
SMCHD1-212ENST00000585229 ISLRO14498 428 aa7.39□□□□□ -1.23
SMCHD1-212ENST00000585229 RANP62826 216 aaKnown RBP7.39□□□□□ -1.23
SMCHD1-212ENST00000585229 CD300EQ496F6 205 aaPredicted RBP7.39□□□□□ -1.23
SMCHD1-212ENST00000585229 CST9LP1Q5W188 147 aa7.39□□□□□ -1.23
SMCHD1-212ENST00000585229 EXOC3-AS1Q8N2X6 119 aa7.39□□□□□ -1.23
SMCHD1-212ENST00000585229 SPATA3Q8NHX4 192 aa7.39□□□□□ -1.23
SMCHD1-212ENST00000585229 C2CD4CQ8TF44 421 aa7.39□□□□□ -1.23
SMCHD1-212ENST00000585229 SPAG8Q99932 426 aaPredicted RBP7.39□□□□□ -1.23
SMCHD1-212ENST00000585229 MCRIP2Q9BUT9 160 aaKnown RBP7.39□□□□□ -1.23
SMCHD1-212ENST00000585229 TRRAPQ9Y4A5 3859 aa7.39□□□□□ -1.23
SMCHD1-212ENST00000585229 SERTM2A0A1B0GWG4 89 aa7.38□□□□□ -1.23
SMCHD1-212ENST00000585229 ZNF561-AS1K7EIQ3 104 aa7.38□□□□□ -1.23
SMCHD1-212ENST00000585229 SAP30O75446 220 aa7.38□□□□□ -1.23
SMCHD1-212ENST00000585229 C9orf66Q5T8R8 295 aa7.38□□□□□ -1.23
SMCHD1-212ENST00000585229 SLC7A5P1Q8MH63 180 aa7.38□□□□□ -1.23
SMCHD1-212ENST00000585229 HIST1H2BAQ96A08 127 aa7.38□□□□□ -1.23
SMCHD1-212ENST00000585229 RPUSD4Q96CM3 377 aaKnown RBP7.38□□□□□ -1.23
SMCHD1-212ENST00000585229 C16orf92Q96LL3 132 aa7.38□□□□□ -1.23
SMCHD1-212ENST00000585229 C20orf173Q96LM9 149 aa7.38□□□□□ -1.23
SMCHD1-212ENST00000585229 SLC35B3Q9H1N7 401 aa7.38□□□□□ -1.23
SMCHD1-212ENST00000585229 AAMDCQ9H7C9 122 aa7.38□□□□□ -1.23
SMCHD1-212ENST00000585229 EPDR1Q9UM22 224 aa7.38□□□□□ -1.23
SMCHD1-212ENST00000585229 TRBV6-1A0A0K0K1D8 114 aa7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 TMEM218A2RU14 115 aa7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 IZUMO1RA6ND01 250 aa7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 DIRC3C9JPN6 131 aa7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 M0R3E3 92 aa7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 PEX7O00628 323 aa7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 TCRAP04437 139 aa7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 SLC25A5P05141 298 aaKnown RBP7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 MED14OSP0DP75 135 aa7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 HLA-DMBP28068 263 aa7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 ID1P41134 155 aa7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 PAFAH1B2P68402 229 aa7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 PSG3Q16557 428 aa7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 LCN12Q6JVE5 192 aa7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 RBPMS2Q6ZRY4 209 aaKnown RBP7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 FAM24BQ8N5W8 94 aa7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 CYB561D1Q8N8Q1 229 aa7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 ATG101Q9BSB4 218 aa7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 TREM1Q9NP99 234 aa7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 ZNF256Q9Y2P7 627 aaPredicted RBP7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 KLF12Q9Y4X4 402 aa7.37□□□□□ -1.23
SMCHD1-212ENST00000585229 IGKV3-7A0A075B6H7 116 aa7.36□□□□□ -1.23
SMCHD1-212ENST00000585229 OR4C46A6NHA9 309 aa7.36□□□□□ -1.23
SMCHD1-212ENST00000585229 DNASE2O00115 360 aaPredicted RBP7.36□□□□□ -1.23
SMCHD1-212ENST00000585229 BEAN1Q3B7T3 259 aa7.36□□□□□ -1.23
SMCHD1-212ENST00000585229 C10orf91Q5T1B1 145 aa7.36□□□□□ -1.23
SMCHD1-212ENST00000585229 IGFL4Q6B9Z1 124 aa7.36□□□□□ -1.23
SMCHD1-212ENST00000585229 GBGT1Q8N5D6 347 aa7.36□□□□□ -1.23
SMCHD1-212ENST00000585229 RNF182Q8N6D2 247 aa7.36□□□□□ -1.23
SMCHD1-212ENST00000585229 FAM110AQ9BQ89 295 aa7.36□□□□□ -1.23
SMCHD1-212ENST00000585229 GPR61Q9BZJ8 451 aa7.36□□□□□ -1.23
SMCHD1-212ENST00000585229 SELENOKQ9Y6D0 94 aa7.36□□□□□ -1.23
SMCHD1-212ENST00000585229 RBAKDNA6NC62 111 aa7.35□□□□□ -1.23
SMCHD1-212ENST00000585229 FBLL1A6NHQ2 334 aaKnown RBP7.35□□□□□ -1.23
SMCHD1-212ENST00000585229 S100A9P06702 114 aaKnown RBP7.35□□□□□ -1.23
SMCHD1-212ENST00000585229 SFTA3P0C7M3 94 aa7.35□□□□□ -1.23
SMCHD1-212ENST00000585229 ADCYAP1P18509 176 aa7.35□□□□□ -1.23
SMCHD1-212ENST00000585229 AKR1C3P42330 323 aa7.35□□□□□ -1.23
SMCHD1-212ENST00000585229 CSN1S1P47710 185 aa7.35□□□□□ -1.23
SMCHD1-212ENST00000585229 SNRPD3P62318 126 aaKnown RBP7.35□□□□□ -1.23
SMCHD1-212ENST00000585229 GNG5P63218 68 aa7.35□□□□□ -1.23
SMCHD1-212ENST00000585229 PRR31Q5SQ13 230 aa7.35□□□□□ -1.23
SMCHD1-212ENST00000585229 TMEM75Q8N9X5 138 aa7.35□□□□□ -1.23
SMCHD1-212ENST00000585229 CMTM2Q8TAZ6 248 aa7.35□□□□□ -1.23
SMCHD1-212ENST00000585229 PARLQ9H300 379 aa7.35□□□□□ -1.23
SMCHD1-212ENST00000585229 PPP1R14DQ9NXH3 145 aa7.35□□□□□ -1.23
SMCHD1-212ENST00000585229 DNAH3Q8TD57 4116 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms