RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 MLANAQ16655 118 aa12.73□□□□□ -0.37
TOP3A-220ENST00000585031 BSXQ3C1V8 233 aa12.73□□□□□ -0.37
TOP3A-220ENST00000585031 ZNRF2Q8NHG8 242 aa12.73□□□□□ -0.37
TOP3A-220ENST00000585031 RSG1Q9BU20 258 aa12.73□□□□□ -0.37
TOP3A-220ENST00000585031 NPVFQ9HCQ7 196 aa12.73□□□□□ -0.37
TOP3A-220ENST00000585031 U3KQE9 123 aa12.73□□□□□ -0.37
TOP3A-220ENST00000585031 IGHV3OR16-12A0A075B7B8 117 aa12.72□□□□□ -0.37
TOP3A-220ENST00000585031 A0A1W2PS18 150 aa12.72□□□□□ -0.37
TOP3A-220ENST00000585031 HELTA6NFD8 242 aa12.72□□□□□ -0.37
TOP3A-220ENST00000585031 PRSS46E5RG02 174 aa12.72□□□□□ -0.37
TOP3A-220ENST00000585031 NPBWR1P48145 328 aa12.72□□□□□ -0.37
TOP3A-220ENST00000585031 GDF5OSQ5U4N7 250 aa12.72□□□□□ -0.37
TOP3A-220ENST00000585031 RNASEH2CQ8TDP1 164 aaKnown RBP12.72□□□□□ -0.37
TOP3A-220ENST00000585031 TMEM170AQ8WVE7 144 aa12.72□□□□□ -0.37
TOP3A-220ENST00000585031 C1QTNF4Q9BXJ3 329 aa12.72□□□□□ -0.37
TOP3A-220ENST00000585031 GPX4P36969 197 aaPredicted RBP12.71□□□□□ -0.37
TOP3A-220ENST00000585031 AKR1C1Q04828 323 aa12.71□□□□□ -0.37
TOP3A-220ENST00000585031 LYPD6BQ8NI32 183 aa12.71□□□□□ -0.37
TOP3A-220ENST00000585031 GLMPQ8WWB7 406 aa12.71□□□□□ -0.37
TOP3A-220ENST00000585031 METTL26Q96S19 204 aa12.71□□□□□ -0.37
TOP3A-220ENST00000585031 NPCDR1Q9BY65 106 aa12.71□□□□□ -0.37
TOP3A-220ENST00000585031 FNDC4Q9H6D8 234 aaPredicted RBP12.71□□□□□ -0.37
TOP3A-220ENST00000585031 KRBOX1C9JBD0 128 aa12.7□□□□□ -0.38
TOP3A-220ENST00000585031 CORTO00230 105 aa12.7□□□□□ -0.38
TOP3A-220ENST00000585031 H2AFB1P0C5Y9 115 aa12.7□□□□□ -0.38
TOP3A-220ENST00000585031 SLC35E1Q96K37 410 aa12.7□□□□□ -0.38
TOP3A-220ENST00000585031 TMEM189A5PLL7 270 aa12.69□□□□□ -0.38
TOP3A-220ENST00000585031 IGKV1-17P01599 117 aa12.69□□□□□ -0.38
TOP3A-220ENST00000585031 ACOT6Q3I5F7 207 aaPredicted RBP12.69□□□□□ -0.38
TOP3A-220ENST00000585031 TOR2AQ5JU69 321 aa12.69□□□□□ -0.38
TOP3A-220ENST00000585031 FFAR4Q5NUL3 377 aa12.69□□□□□ -0.38
TOP3A-220ENST00000585031 ETFRF1Q6IPR1 90 aa12.69□□□□□ -0.38
TOP3A-220ENST00000585031 TEPPQ6URK8 271 aa12.69□□□□□ -0.38
TOP3A-220ENST00000585031 C16orf54Q6UWD8 224 aa12.69□□□□□ -0.38
TOP3A-220ENST00000585031 PBDC1Q9BVG4 233 aa12.69□□□□□ -0.38
TOP3A-220ENST00000585031 RFNGQ9Y644 331 aa12.69□□□□□ -0.38
TOP3A-220ENST00000585031 SMIM9A6NGZ8 99 aa12.68□□□□□ -0.38
TOP3A-220ENST00000585031 IGKV3-20P01619 116 aa12.68□□□□□ -0.38
TOP3A-220ENST00000585031 HLA-DRB4P13762 266 aa12.68□□□□□ -0.38
TOP3A-220ENST00000585031 OPRK1P41145 380 aa12.68□□□□□ -0.38
TOP3A-220ENST00000585031 FHITP49789 147 aa12.68□□□□□ -0.38
TOP3A-220ENST00000585031 NUTF2P61970 127 aaKnown RBP12.68□□□□□ -0.38
TOP3A-220ENST00000585031 TIGITQ495A1 244 aa12.68□□□□□ -0.38
TOP3A-220ENST00000585031 TMEM144Q7Z5S9 345 aa12.68□□□□□ -0.38
TOP3A-220ENST00000585031 HLA-DRB4X5D2U9 266 aa12.68□□□□□ -0.38
TOP3A-220ENST00000585031 CLN5O75503 358 aa12.67□□□□□ -0.38
TOP3A-220ENST00000585031 C1orf158Q8N1D5 194 aa12.67□□□□□ -0.38
TOP3A-220ENST00000585031 NARS2Q96I59 477 aaKnown RBP12.67□□□□□ -0.38
TOP3A-220ENST00000585031 KRTAP1-5Q9BYS1 174 aa12.67□□□□□ -0.38
TOP3A-220ENST00000585031 TREM1Q9NP99 234 aa12.67□□□□□ -0.38
TOP3A-220ENST00000585031 RPRMQ9NS64 109 aa12.67□□□□□ -0.38
TOP3A-220ENST00000585031 YTHDF2Q9Y5A9 579 aaKnown RBP12.67□□□□□ -0.38
TOP3A-220ENST00000585031 TRAV1-1A0A0B4J248 108 aa12.66□□□□□ -0.38
TOP3A-220ENST00000585031 M6PRP20645 277 aa12.66□□□□□ -0.38
TOP3A-220ENST00000585031 PEA15Q15121 130 aa12.66□□□□□ -0.38
TOP3A-220ENST00000585031 SFT2D1Q8WV19 159 aa12.66□□□□□ -0.38
TOP3A-220ENST00000585031 MBD3L1Q8WWY6 194 aa12.66□□□□□ -0.38
TOP3A-220ENST00000585031 MGST2Q99735 147 aa12.66□□□□□ -0.38
TOP3A-220ENST00000585031 ACTR3CQ9C0K3 210 aaPredicted RBP12.66□□□□□ -0.38
TOP3A-220ENST00000585031 SLC39A9Q9NUM3 307 aa12.66□□□□□ -0.38
TOP3A-220ENST00000585031 CTXND1A0A1B0GTU2 59 aa12.65□□□□□ -0.38
TOP3A-220ENST00000585031 OR10G4Q8NGN3 311 aa12.65□□□□□ -0.38
TOP3A-220ENST00000585031 OR10G9Q8NGN4 311 aa12.65□□□□□ -0.38
TOP3A-220ENST00000585031 OR10G7Q8NGN6 311 aa12.65□□□□□ -0.38
TOP3A-220ENST00000585031 OR4X1Q8NH49 305 aa12.65□□□□□ -0.38
TOP3A-220ENST00000585031 ATG101Q9BSB4 218 aa12.65□□□□□ -0.38
TOP3A-220ENST00000585031 SLC35B3Q9H1N7 401 aa12.65□□□□□ -0.38
TOP3A-220ENST00000585031 LINC00588Q9Y4M8 146 aa12.65□□□□□ -0.38
TOP3A-220ENST00000585031 AGPAT2O15120 278 aa12.64□□□□□ -0.39
TOP3A-220ENST00000585031 PRM2P04554 102 aa12.64□□□□□ -0.39
TOP3A-220ENST00000585031 RPL29P47914 159 aaKnown RBP12.64□□□□□ -0.39
TOP3A-220ENST00000585031 LYPD1Q8N2G4 141 aa12.64□□□□□ -0.39
TOP3A-220ENST00000585031 C15orf53Q8NAA6 179 aa12.64□□□□□ -0.39
TOP3A-220ENST00000585031 BPIFCQ8NFQ6 507 aa12.64□□□□□ -0.39
TOP3A-220ENST00000585031 SMDT1Q9H4I9 107 aa12.64□□□□□ -0.39
TOP3A-220ENST00000585031 PXMP4Q9Y6I8 212 aa12.64□□□□□ -0.39
TOP3A-220ENST00000585031 TEX48A0A1B0GUV7 120 aa12.63□□□□□ -0.39
TOP3A-220ENST00000585031 LOC102723971A0A1B0GUV8 181 aa12.63□□□□□ -0.39
TOP3A-220ENST00000585031 MAP1LC3B2A6NCE7 125 aa12.63□□□□□ -0.39
TOP3A-220ENST00000585031 IFNA1P01562 189 aa12.63□□□□□ -0.39
TOP3A-220ENST00000585031 XGP55808 180 aa12.63□□□□□ -0.39
TOP3A-220ENST00000585031 B2MP61769 119 aa12.63□□□□□ -0.39
TOP3A-220ENST00000585031 DAD1P61803 113 aa12.63□□□□□ -0.39
TOP3A-220ENST00000585031 SNRPD3P62318 126 aaKnown RBP12.63□□□□□ -0.39
TOP3A-220ENST00000585031 GAMTQ14353 236 aa12.63□□□□□ -0.39
TOP3A-220ENST00000585031 GUK1Q16774 197 aa12.63□□□□□ -0.39
TOP3A-220ENST00000585031 FAM122CQ6P4D5 195 aa12.63□□□□□ -0.39
TOP3A-220ENST00000585031 MAP1LC3BQ9GZQ8 125 aa12.63□□□□□ -0.39
TOP3A-220ENST00000585031 EIF5A2Q9GZV4 153 aaKnown RBP12.63□□□□□ -0.39
TOP3A-220ENST00000585031 A0A1B0GV50 99 aa12.62□□□□□ -0.39
TOP3A-220ENST00000585031 A0A1W2PPV4 95 aa12.62□□□□□ -0.39
TOP3A-220ENST00000585031 TMEM218A2RU14 115 aa12.62□□□□□ -0.39
TOP3A-220ENST00000585031 FUSP35637 526 aaKnown RBP eCLIP12.62□□□□□ -0.39
TOP3A-220ENST00000585031 CDC34P49427 236 aaPredicted RBP12.62□□□□□ -0.39
TOP3A-220ENST00000585031 USF2Q15853 346 aaPredicted RBP12.62□□□□□ -0.39
TOP3A-220ENST00000585031 MIC13Q5XKP0 118 aa12.62□□□□□ -0.39
TOP3A-220ENST00000585031 ACY3Q96HD9 319 aa12.62□□□□□ -0.39
TOP3A-220ENST00000585031 LINC00052Q96N35 136 aa12.62□□□□□ -0.39
TOP3A-220ENST00000585031 SEPSECSQ9HD40 501 aaKnown RBP12.62□□□□□ -0.39
TOP3A-220ENST00000585031 NRN1Q9NPD7 142 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms