RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 KCNIP2Q9NS61 270 aa9.51□□□□□ -0.89
SREBF1-223ENST00000584760 DKK2Q9UBU2 259 aa9.51□□□□□ -0.89
SREBF1-223ENST00000584760 KIAA1109Q2LD37 5005 aa9.5□□□□□ -0.89
SREBF1-223ENST00000584760 TRBV19A0A075B6N1 114 aa9.5□□□□□ -0.89
SREBF1-223ENST00000584760 NDUFB4O95168 129 aa9.5□□□□□ -0.89
SREBF1-223ENST00000584760 SPART-AS1P0CW21 52 aa9.5□□□□□ -0.89
SREBF1-223ENST00000584760 PYYP10082 97 aa9.5□□□□□ -0.89
SREBF1-223ENST00000584760 RPL12P30050 165 aaKnown RBP9.5□□□□□ -0.89
SREBF1-223ENST00000584760 EMP1P54849 157 aa9.5□□□□□ -0.89
SREBF1-223ENST00000584760 RHOBP62745 196 aa9.5□□□□□ -0.89
SREBF1-223ENST00000584760 RRN3P1Q2M238 152 aa9.5□□□□□ -0.89
SREBF1-223ENST00000584760 FAM222AQ5U5X8 452 aa9.5□□□□□ -0.89
SREBF1-223ENST00000584760 FAM167A-AS1Q96KT0 104 aa9.5□□□□□ -0.89
SREBF1-223ENST00000584760 TMEM208Q9BTX3 173 aa9.5□□□□□ -0.89
SREBF1-223ENST00000584760 SLC25A2Q9BXI2 301 aa9.5□□□□□ -0.89
SREBF1-223ENST00000584760 APLNQ9ULZ1 77 aa9.5□□□□□ -0.89
SREBF1-223ENST00000584760 DNAH6Q9C0G6 4158 aa9.49□□□□□ -0.89
SREBF1-223ENST00000584760 IGLL5B9A064 214 aa9.49□□□□□ -0.89
SREBF1-223ENST00000584760 HIST1H1EP10412 219 aaKnown RBP9.49□□□□□ -0.89
SREBF1-223ENST00000584760 PDE6HQ13956 83 aa9.49□□□□□ -0.89
SREBF1-223ENST00000584760 MIR17HGQ75NE6 70 aa9.49□□□□□ -0.89
SREBF1-223ENST00000584760 MRPL53Q96EL3 112 aaKnown RBP9.49□□□□□ -0.89
SREBF1-223ENST00000584760 MRPL32Q9BYC8 188 aaKnown RBP9.49□□□□□ -0.89
SREBF1-223ENST00000584760 YTHDF2Q9Y5A9 579 aaKnown RBP9.49□□□□□ -0.89
SREBF1-223ENST00000584760 IGHV4-4A0A075B6R2 117 aa9.48□□□□□ -0.89
SREBF1-223ENST00000584760 DEFB131BA0A096LNP1 70 aa9.48□□□□□ -0.89
SREBF1-223ENST00000584760 TEX48A0A1B0GUV7 120 aa9.48□□□□□ -0.89
SREBF1-223ENST00000584760 ZNF705GA8MUZ8 300 aaPredicted RBP9.48□□□□□ -0.89
SREBF1-223ENST00000584760 PRM2P04554 102 aa9.48□□□□□ -0.89
SREBF1-223ENST00000584760 TSPOP30536 169 aa9.48□□□□□ -0.89
SREBF1-223ENST00000584760 CDKN1BP46527 198 aa9.48□□□□□ -0.89
SREBF1-223ENST00000584760 OR10J6PQ8NGY7 276 aa9.48□□□□□ -0.89
SREBF1-223ENST00000584760 SMIM3Q9BZL3 60 aa9.48□□□□□ -0.89
SREBF1-223ENST00000584760 PPP1R14DQ9NXH3 145 aa9.48□□□□□ -0.89
SREBF1-223ENST00000584760 DNAH10Q8IVF4 4471 aa9.47□□□□□ -0.89
SREBF1-223ENST00000584760 PLAC8L1A1L4L8 177 aa9.47□□□□□ -0.89
SREBF1-223ENST00000584760 NPIPB6E9PJ23 425 aa9.47□□□□□ -0.89
SREBF1-223ENST00000584760 C17orf112F2Z3M2 114 aa9.47□□□□□ -0.89
SREBF1-223ENST00000584760 M0R3E3 92 aa9.47□□□□□ -0.89
SREBF1-223ENST00000584760 KIR3DS1Q14943 382 aa9.47□□□□□ -0.89
SREBF1-223ENST00000584760 FCN2Q15485 313 aa9.47□□□□□ -0.89
SREBF1-223ENST00000584760 TMEM256Q8N2U0 113 aa9.47□□□□□ -0.89
SREBF1-223ENST00000584760 ODF3Q96PU9 254 aa9.47□□□□□ -0.89
SREBF1-223ENST00000584760 NIPSNAP3BQ9BS92 247 aa9.47□□□□□ -0.89
SREBF1-223ENST00000584760 PARD6GQ9BYG4 376 aaPredicted RBP9.47□□□□□ -0.89
SREBF1-223ENST00000584760 WFDC1Q9HC57 220 aa9.47□□□□□ -0.89
SREBF1-223ENST00000584760 OXA1LQ15070 435 aa9.46□□□□□ -0.9
SREBF1-223ENST00000584760 GFI1BQ5VTD9 330 aa9.46□□□□□ -0.9
SREBF1-223ENST00000584760 EXOC3-AS1Q8N2X6 119 aa9.46□□□□□ -0.9
SREBF1-223ENST00000584760 BLNKQ8WV28 456 aa9.46□□□□□ -0.9
SREBF1-223ENST00000584760 FXYD5Q96DB9 178 aa9.46□□□□□ -0.9
SREBF1-223ENST00000584760 C20orf144Q9BQM9 153 aa9.46□□□□□ -0.9
SREBF1-223ENST00000584760 MED28Q9H204 178 aa9.46□□□□□ -0.9
SREBF1-223ENST00000584760 FUT9Q9Y231 359 aa9.46□□□□□ -0.9
SREBF1-223ENST00000584760 PRELID1Q9Y255 219 aa9.46□□□□□ -0.9
SREBF1-223ENST00000584760 IFNA5P01569 189 aa9.45□□□□□ -0.9
SREBF1-223ENST00000584760 CT45A10P0DMU9 189 aa9.45□□□□□ -0.9
SREBF1-223ENST00000584760 AZU1P20160 251 aa9.45□□□□□ -0.9
SREBF1-223ENST00000584760 TAS2R60P59551 318 aa9.45□□□□□ -0.9
SREBF1-223ENST00000584760 FFAR4Q5NUL3 377 aa9.45□□□□□ -0.9
SREBF1-223ENST00000584760 SCGB1C1Q8TD33 95 aa9.45□□□□□ -0.9
SREBF1-223ENST00000584760 ZNF503Q96F45 646 aa9.45□□□□□ -0.9
SREBF1-223ENST00000584760 LINC01587Q99440 93 aa9.45□□□□□ -0.9
SREBF1-223ENST00000584760 OR51M1Q9H341 326 aa9.45□□□□□ -0.9
SREBF1-223ENST00000584760 PLA2G2EQ9NZK7 142 aa9.45□□□□□ -0.9
SREBF1-223ENST00000584760 TIMM9Q9Y5J7 89 aa9.45□□□□□ -0.9
SREBF1-223ENST00000584760 H7BYZ3 331 aa9.44□□□□□ -0.9
SREBF1-223ENST00000584760 OR10J4P0C629 311 aa9.44□□□□□ -0.9
SREBF1-223ENST00000584760 NBEAP1P0C6P0 100 aa9.44□□□□□ -0.9
SREBF1-223ENST00000584760 ICAM4Q14773 271 aa9.44□□□□□ -0.9
SREBF1-223ENST00000584760 RNASE8Q8TDE3 154 aaKnown RBP9.44□□□□□ -0.9
SREBF1-223ENST00000584760 PHYHIPLQ96FC7 376 aa9.44□□□□□ -0.9
SREBF1-223ENST00000584760 PAXXQ9BUH6 204 aa9.44□□□□□ -0.9
SREBF1-223ENST00000584760 AAMDCQ9H7C9 122 aa9.44□□□□□ -0.9
SREBF1-223ENST00000584760 LYRM9A8MSI8 78 aa9.43□□□□□ -0.9
SREBF1-223ENST00000584760 OR7C2O60412 319 aa9.43□□□□□ -0.9
SREBF1-223ENST00000584760 GIPP09681 153 aaPredicted RBP9.43□□□□□ -0.9
SREBF1-223ENST00000584760 TMEM263Q8WUH6 116 aaKnown RBP9.43□□□□□ -0.9
SREBF1-223ENST00000584760 RNF141Q8WVD5 230 aa9.43□□□□□ -0.9
SREBF1-223ENST00000584760 C16orf74Q96GX8 76 aa9.43□□□□□ -0.9
SREBF1-223ENST00000584760 FAM19A4Q96LR4 140 aa9.43□□□□□ -0.9
SREBF1-223ENST00000584760 AQP10Q96PS8 301 aa9.43□□□□□ -0.9
SREBF1-223ENST00000584760 NDUFAF3Q9BU61 184 aa9.43□□□□□ -0.9
SREBF1-223ENST00000584760 IGKV2-40A0A087WW87 121 aaPredicted RBP9.42□□□□□ -0.9
SREBF1-223ENST00000584760 IGKV2D-40P01614 121 aaPredicted RBP9.42□□□□□ -0.9
SREBF1-223ENST00000584760 LEPP41159 167 aa9.42□□□□□ -0.9
SREBF1-223ENST00000584760 DAD1P61803 113 aa9.42□□□□□ -0.9
SREBF1-223ENST00000584760 UBE2L3P68036 154 aaKnown RBP9.42□□□□□ -0.9
SREBF1-223ENST00000584760 ERCC8Q13216 396 aa9.42□□□□□ -0.9
SREBF1-223ENST00000584760 RGS21Q2M5E4 152 aa9.42□□□□□ -0.9
SREBF1-223ENST00000584760 KHDC3LQ587J8 217 aa9.42□□□□□ -0.9
SREBF1-223ENST00000584760 Q5BKY6 102 aa9.42□□□□□ -0.9
SREBF1-223ENST00000584760 FAM122CQ6P4D5 195 aa9.42□□□□□ -0.9
SREBF1-223ENST00000584760 ZNF493Q6ZR52 646 aa9.42□□□□□ -0.9
SREBF1-223ENST00000584760 C9orf47Q6ZRZ4 202 aa9.42□□□□□ -0.9
SREBF1-223ENST00000584760 ASB13Q8WXK3 278 aa9.42□□□□□ -0.9
SREBF1-223ENST00000584760 FAM210BQ96KR6 192 aa9.42□□□□□ -0.9
SREBF1-223ENST00000584760 HECTD4Q9Y4D8 3996 aa9.42□□□□□ -0.9
SREBF1-223ENST00000584760 RYR1P21817 5038 aa9.42□□□□□ -0.9
SREBF1-223ENST00000584760 KLLNB2CW77 178 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms