RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 EBLN2Q6P2I7 272 aa7.28□□□□□ -1.24
GGA3-219ENST00000584550 BPIFA4PQ86YQ2 179 aa7.28□□□□□ -1.24
GGA3-219ENST00000584550 OR2T35Q8NGX2 323 aa7.28□□□□□ -1.24
GGA3-219ENST00000584550 CHAC2Q8WUX2 184 aa7.28□□□□□ -1.24
GGA3-219ENST00000584550 RPRMQ9NS64 109 aa7.28□□□□□ -1.24
GGA3-219ENST00000584550 TRAV8-2A0A0B4J237 113 aa7.27□□□□□ -1.25
GGA3-219ENST00000584550 ZNF705DP0CH99 300 aaPredicted RBP7.27□□□□□ -1.25
GGA3-219ENST00000584550 ZNF705BP0CI00 300 aaPredicted RBP7.27□□□□□ -1.25
GGA3-219ENST00000584550 SPP1P10451 314 aa7.27□□□□□ -1.25
GGA3-219ENST00000584550 HLA-DRB4P13762 266 aa7.27□□□□□ -1.25
GGA3-219ENST00000584550 FFAR4Q5NUL3 377 aa7.27□□□□□ -1.25
GGA3-219ENST00000584550 FAM78BQ5VT40 261 aa7.27□□□□□ -1.25
GGA3-219ENST00000584550 SPATA31B1PQ5VZV4 182 aa7.27□□□□□ -1.25
GGA3-219ENST00000584550 MORN3Q6PF18 240 aaPredicted RBP7.27□□□□□ -1.25
GGA3-219ENST00000584550 FOXI2Q6ZQN5 318 aa7.27□□□□□ -1.25
GGA3-219ENST00000584550 INO80EQ8NBZ0 244 aaPredicted RBP7.27□□□□□ -1.25
GGA3-219ENST00000584550 ZNF738Q8NE65 137 aa7.27□□□□□ -1.25
GGA3-219ENST00000584550 SAV1Q9H4B6 383 aaPredicted RBP7.27□□□□□ -1.25
GGA3-219ENST00000584550 KCNIP2Q9NS61 270 aa7.27□□□□□ -1.25
GGA3-219ENST00000584550 RFNGQ9Y644 331 aa7.27□□□□□ -1.25
GGA3-219ENST00000584550 HLA-DRB4X5D2U9 266 aa7.27□□□□□ -1.25
GGA3-219ENST00000584550 NACAE9PAV3 2078 aa7.26□□□□□ -1.25
GGA3-219ENST00000584550 A0A087X0K7 114 aa7.26□□□□□ -1.25
GGA3-219ENST00000584550 H3BQ15 152 aa7.26□□□□□ -1.25
GGA3-219ENST00000584550 SMLR1H3BR10 107 aa7.26□□□□□ -1.25
GGA3-219ENST00000584550 MRPS12O15235 138 aaKnown RBP7.26□□□□□ -1.25
GGA3-219ENST00000584550 EMP1P54849 157 aa7.26□□□□□ -1.25
GGA3-219ENST00000584550 NUTF2P61970 127 aaKnown RBP7.26□□□□□ -1.25
GGA3-219ENST00000584550 MIR17HGQ75NE6 70 aa7.26□□□□□ -1.25
GGA3-219ENST00000584550 ASB13Q8WXK3 278 aa7.26□□□□□ -1.25
GGA3-219ENST00000584550 AQP10Q96PS8 301 aa7.26□□□□□ -1.25
GGA3-219ENST00000584550 XCL2Q9UBD3 114 aa7.26□□□□□ -1.25
GGA3-219ENST00000584550 A0A0J9YX75 114 aa7.25□□□□□ -1.25
GGA3-219ENST00000584550 EPM2AB3EWF7 344 aa7.25□□□□□ -1.25
GGA3-219ENST00000584550 SLC17A3O00476 420 aa7.25□□□□□ -1.25
GGA3-219ENST00000584550 EIF3GO75821 320 aaKnown RBP eCLIP7.25□□□□□ -1.25
GGA3-219ENST00000584550 INAFM2P0DMQ5 153 aa7.25□□□□□ -1.25
GGA3-219ENST00000584550 IGLC2P0DOY2 106 aa7.25□□□□□ -1.25
GGA3-219ENST00000584550 PYYP10082 97 aa7.25□□□□□ -1.25
GGA3-219ENST00000584550 HTN3P15516 51 aa7.25□□□□□ -1.25
GGA3-219ENST00000584550 PSG3Q16557 428 aa7.25□□□□□ -1.25
GGA3-219ENST00000584550 LCN15Q6UWW0 184 aa7.25□□□□□ -1.25
GGA3-219ENST00000584550 SPATA12Q7Z6I5 190 aa7.25□□□□□ -1.25
GGA3-219ENST00000584550 HSD17B11Q8NBQ5 300 aa7.25□□□□□ -1.25
GGA3-219ENST00000584550 CSNK1G2-AS1Q8NCQ2 148 aa7.25□□□□□ -1.25
GGA3-219ENST00000584550 BLNKQ8WV28 456 aa7.25□□□□□ -1.25
GGA3-219ENST00000584550 ZNF705FA8MVS1 300 aaPredicted RBP7.24□□□□□ -1.25
GGA3-219ENST00000584550 ARPC5O15511 151 aa7.24□□□□□ -1.25
GGA3-219ENST00000584550 CNN1P51911 297 aaKnown RBP7.24□□□□□ -1.25
GGA3-219ENST00000584550 PSG9Q00887 426 aa7.24□□□□□ -1.25
GGA3-219ENST00000584550 HIST1H1AQ02539 215 aaPredicted RBP7.24□□□□□ -1.25
GGA3-219ENST00000584550 RNF212Q495C1 297 aa7.24□□□□□ -1.25
GGA3-219ENST00000584550 TMEM41BQ5BJD5 291 aa7.24□□□□□ -1.25
GGA3-219ENST00000584550 RPUSD4Q96CM3 377 aaKnown RBP7.24□□□□□ -1.25
GGA3-219ENST00000584550 SLC50A1Q9BRV3 221 aa7.24□□□□□ -1.25
GGA3-219ENST00000584550 SLC25A2Q9BXI2 301 aa7.24□□□□□ -1.25
GGA3-219ENST00000584550 PARD6GQ9BYG4 376 aaPredicted RBP7.24□□□□□ -1.25
GGA3-219ENST00000584550 SLC35B3Q9H1N7 401 aa7.24□□□□□ -1.25
GGA3-219ENST00000584550 ZNF331Q9NQX6 463 aaPredicted RBP7.24□□□□□ -1.25
GGA3-219ENST00000584550 PPP1R14DQ9NXH3 145 aa7.24□□□□□ -1.25
GGA3-219ENST00000584550 ZNF586Q9NXT0 402 aa7.24□□□□□ -1.25
GGA3-219ENST00000584550 TNFSF18Q9UNG2 199 aa7.24□□□□□ -1.25
GGA3-219ENST00000584550 FUT9Q9Y231 359 aa7.24□□□□□ -1.25
GGA3-219ENST00000584550 TIMM9Q9Y5J7 89 aa7.24□□□□□ -1.25
GGA3-219ENST00000584550 IGHV3OR16-12A0A075B7B8 117 aa7.23□□□□□ -1.25
GGA3-219ENST00000584550 RNF222A6NCQ9 220 aa7.23□□□□□ -1.25
GGA3-219ENST00000584550 OR7C2O60412 319 aa7.23□□□□□ -1.25
GGA3-219ENST00000584550 DUSP14O95147 198 aaKnown RBP7.23□□□□□ -1.25
GGA3-219ENST00000584550 OR10J4P0C629 311 aa7.23□□□□□ -1.25
GGA3-219ENST00000584550 HIST1H1EP10412 219 aaKnown RBP7.23□□□□□ -1.25
GGA3-219ENST00000584550 CXCL2P19875 107 aa7.23□□□□□ -1.25
GGA3-219ENST00000584550 RHOBP62745 196 aa7.23□□□□□ -1.25
GGA3-219ENST00000584550 ZNF266Q14584 549 aa7.23□□□□□ -1.25
GGA3-219ENST00000584550 GUK1Q16774 197 aa7.23□□□□□ -1.25
GGA3-219ENST00000584550 ACOT6Q3I5F7 207 aaPredicted RBP7.23□□□□□ -1.25
GGA3-219ENST00000584550 SAT2Q96F10 170 aaPredicted RBP7.23□□□□□ -1.25
GGA3-219ENST00000584550 FAM167A-AS1Q96KT0 104 aa7.23□□□□□ -1.25
GGA3-219ENST00000584550 PAXXQ9BUH6 204 aa7.23□□□□□ -1.25
GGA3-219ENST00000584550 C1QTNF4Q9BXJ3 329 aa7.23□□□□□ -1.25
GGA3-219ENST00000584550 MRPL32Q9BYC8 188 aaKnown RBP7.23□□□□□ -1.25
GGA3-219ENST00000584550 OR51M1Q9H341 326 aa7.23□□□□□ -1.25
GGA3-219ENST00000584550 TMEM14CQ9P0S9 112 aa7.23□□□□□ -1.25
GGA3-219ENST00000584550 TRBV19A0A075B6N1 114 aa7.22□□□□□ -1.25
GGA3-219ENST00000584550 BORCS7-ASMTA0A0B4J1R7 106 aa7.22□□□□□ -1.25
GGA3-219ENST00000584550 PRAC2D3DTV9 90 aa7.22□□□□□ -1.25
GGA3-219ENST00000584550 G3V3Q6 166 aa7.22□□□□□ -1.25
GGA3-219ENST00000584550 SPART-AS1P0CW21 52 aa7.22□□□□□ -1.25
GGA3-219ENST00000584550 RAB2AP61019 212 aa7.22□□□□□ -1.25
GGA3-219ENST00000584550 RPL7L1Q6DKI1 246 aaKnown RBP7.22□□□□□ -1.25
GGA3-219ENST00000584550 FAM122CQ6P4D5 195 aa7.22□□□□□ -1.25
GGA3-219ENST00000584550 C6orf223Q8N319 242 aa7.22□□□□□ -1.25
GGA3-219ENST00000584550 OR8A1Q8NGG7 326 aa7.22□□□□□ -1.25
GGA3-219ENST00000584550 UBR4Q5T4S7 5183 aa7.22□□□□□ -1.25
GGA3-219ENST00000584550 hCG_2014768A0A024R1R8 64 aa7.21□□□□□ -1.26
GGA3-219ENST00000584550 A0A1W2PPV4 95 aa7.21□□□□□ -1.26
GGA3-219ENST00000584550 M0R2Z0 102 aa7.21□□□□□ -1.26
GGA3-219ENST00000584550 HMGB3O15347 200 aaKnown RBP7.21□□□□□ -1.26
GGA3-219ENST00000584550 NDUFB4O95168 129 aa7.21□□□□□ -1.26
GGA3-219ENST00000584550 NBEAP1P0C6P0 100 aa7.21□□□□□ -1.26
GGA3-219ENST00000584550 M6PRP20645 277 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms