RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 H3BQ15 152 aa7.07□□□□□ -1.28
SKA2-208ENST00000583927 M0R2Z0 102 aa7.07□□□□□ -1.28
SKA2-208ENST00000583927 SLC17A3O00476 420 aa7.07□□□□□ -1.28
SKA2-208ENST00000583927 RGS13O14921 159 aa7.07□□□□□ -1.28
SKA2-208ENST00000583927 SSNA1O43805 119 aa7.07□□□□□ -1.28
SKA2-208ENST00000583927 HIST1H1EP10412 219 aaKnown RBP7.07□□□□□ -1.28
SKA2-208ENST00000583927 CDKN1BP46527 198 aa7.07□□□□□ -1.28
SKA2-208ENST00000583927 SPINK13Q1W4C9 94 aa7.07□□□□□ -1.28
SKA2-208ENST00000583927 LRRC37A5PQ49AS3 106 aa7.07□□□□□ -1.28
SKA2-208ENST00000583927 PARD6GQ9BYG4 376 aaPredicted RBP7.07□□□□□ -1.28
SKA2-208ENST00000583927 WDR61Q9GZS3 305 aaKnown RBP7.07□□□□□ -1.28
SKA2-208ENST00000583927 PRELID1Q9Y255 219 aa7.07□□□□□ -1.28
SKA2-208ENST00000583927 HSPB11Q9Y547 144 aa7.07□□□□□ -1.28
SKA2-208ENST00000583927 TRBV19A0A075B6N1 114 aa7.06□□□□□ -1.28
SKA2-208ENST00000583927 IGHV3OR16-12A0A075B7B8 117 aa7.06□□□□□ -1.28
SKA2-208ENST00000583927 DEFB131BA0A096LNP1 70 aa7.06□□□□□ -1.28
SKA2-208ENST00000583927 TRAV5A0A0B4J249 113 aa7.06□□□□□ -1.28
SKA2-208ENST00000583927 LOC102723971A0A1B0GUV8 181 aa7.06□□□□□ -1.28
SKA2-208ENST00000583927 LYRM9A8MSI8 78 aa7.06□□□□□ -1.28
SKA2-208ENST00000583927 IGLL5B9A064 214 aa7.06□□□□□ -1.28
SKA2-208ENST00000583927 HIST1H1AQ02539 215 aaPredicted RBP7.06□□□□□ -1.28
SKA2-208ENST00000583927 RGS21Q2M5E4 152 aa7.06□□□□□ -1.28
SKA2-208ENST00000583927 OR10J6PQ8NGY7 276 aa7.06□□□□□ -1.28
SKA2-208ENST00000583927 ATP5SQ99766 215 aa7.06□□□□□ -1.28
SKA2-208ENST00000583927 NIPSNAP3BQ9BS92 247 aa7.06□□□□□ -1.28
SKA2-208ENST00000583927 TMEM208Q9BTX3 173 aa7.06□□□□□ -1.28
SKA2-208ENST00000583927 MRPL32Q9BYC8 188 aaKnown RBP7.06□□□□□ -1.28
SKA2-208ENST00000583927 ZNF586Q9NXT0 402 aa7.06□□□□□ -1.28
SKA2-208ENST00000583927 NACAE9PAV3 2078 aa7.05□□□□□ -1.28
SKA2-208ENST00000583927 DNAH2Q9P225 4427 aa7.05□□□□□ -1.28
SKA2-208ENST00000583927 IGHV4-4A0A075B6R2 117 aa7.05□□□□□ -1.28
SKA2-208ENST00000583927 C17orf112F2Z3M2 114 aa7.05□□□□□ -1.28
SKA2-208ENST00000583927 TAS2R60P59551 318 aa7.05□□□□□ -1.28
SKA2-208ENST00000583927 RHOBP62745 196 aa7.05□□□□□ -1.28
SKA2-208ENST00000583927 FAM222AQ5U5X8 452 aa7.05□□□□□ -1.28
SKA2-208ENST00000583927 ZNF493Q6ZR52 646 aa7.05□□□□□ -1.28
SKA2-208ENST00000583927 THAP6Q8TBB0 222 aa7.05□□□□□ -1.28
SKA2-208ENST00000583927 ASB13Q8WXK3 278 aa7.05□□□□□ -1.28
SKA2-208ENST00000583927 FAM167A-AS1Q96KT0 104 aa7.05□□□□□ -1.28
SKA2-208ENST00000583927 YTHDF2Q9Y5A9 579 aaKnown RBP7.05□□□□□ -1.28
SKA2-208ENST00000583927 HECTD4Q9Y4D8 3996 aa7.05□□□□□ -1.28
SKA2-208ENST00000583927 PLAC8L1A1L4L8 177 aa7.04□□□□□ -1.28
SKA2-208ENST00000583927 PRAC2D3DTV9 90 aa7.04□□□□□ -1.28
SKA2-208ENST00000583927 NPIPB6E9PJ23 425 aa7.04□□□□□ -1.28
SKA2-208ENST00000583927 H7BYZ3 331 aa7.04□□□□□ -1.28
SKA2-208ENST00000583927 NDUFB4O95168 129 aa7.04□□□□□ -1.28
SKA2-208ENST00000583927 RPL12P30050 165 aaKnown RBP7.04□□□□□ -1.28
SKA2-208ENST00000583927 CLINT1Q14677 625 aa7.04□□□□□ -1.28
SKA2-208ENST00000583927 GCSAMLQ5JQS6 135 aa7.04□□□□□ -1.28
SKA2-208ENST00000583927 BAP18Q8IXM2 172 aa7.04□□□□□ -1.28
SKA2-208ENST00000583927 NDUFAF3Q9BU61 184 aa7.04□□□□□ -1.28
SKA2-208ENST00000583927 SLC25A2Q9BXI2 301 aa7.04□□□□□ -1.28
SKA2-208ENST00000583927 PPP1R14DQ9NXH3 145 aa7.04□□□□□ -1.28
SKA2-208ENST00000583927 MBD2Q9UBB5 411 aa7.04□□□□□ -1.28
SKA2-208ENST00000583927 ALG5Q9Y673 324 aa7.04□□□□□ -1.28
SKA2-208ENST00000583927 DNAH17Q9UFH2 4485 aa7.03□□□□□ -1.28
SKA2-208ENST00000583927 TRAV12-2A0A075B6T6 113 aa7.03□□□□□ -1.28
SKA2-208ENST00000583927 NMBP08949 121 aa7.03□□□□□ -1.28
SKA2-208ENST00000583927 EMP1P54849 157 aa7.03□□□□□ -1.28
SKA2-208ENST00000583927 LYPD1Q8N2G4 141 aa7.03□□□□□ -1.28
SKA2-208ENST00000583927 RPP25LQ8N5L8 163 aaKnown RBP7.03□□□□□ -1.28
SKA2-208ENST00000583927 TMEM263Q8WUH6 116 aaKnown RBP7.03□□□□□ -1.28
SKA2-208ENST00000583927 C16orf74Q96GX8 76 aa7.03□□□□□ -1.28
SKA2-208ENST00000583927 LINC00477Q96M19 166 aa7.03□□□□□ -1.28
SKA2-208ENST00000583927 ARPC5LQ9BPX5 153 aa7.03□□□□□ -1.28
SKA2-208ENST00000583927 OR51M1Q9H341 326 aa7.03□□□□□ -1.28
SKA2-208ENST00000583927 AAMDCQ9H7C9 122 aa7.03□□□□□ -1.28
SKA2-208ENST00000583927 FUT9Q9Y231 359 aa7.03□□□□□ -1.28
SKA2-208ENST00000583927 MUC4Q99102 2169 aa7.03□□□□□ -1.28
SKA2-208ENST00000583927 TRBV7-9A0A0J9YWB2 115 aa7.02□□□□□ -1.29
SKA2-208ENST00000583927 ZNF705GA8MUZ8 300 aaPredicted RBP7.02□□□□□ -1.29
SKA2-208ENST00000583927 H3BTX0 84 aa7.02□□□□□ -1.29
SKA2-208ENST00000583927 IFNA5P01569 189 aa7.02□□□□□ -1.29
SKA2-208ENST00000583927 SNRPCP09234 159 aaKnown RBP7.02□□□□□ -1.29
SKA2-208ENST00000583927 NBEAP1P0C6P0 100 aa7.02□□□□□ -1.29
SKA2-208ENST00000583927 P0DMU3 169 aa7.02□□□□□ -1.29
SKA2-208ENST00000583927 FAM231AP0DMU4 169 aa7.02□□□□□ -1.29
SKA2-208ENST00000583927 FAM231CP0DMU5 169 aa7.02□□□□□ -1.29
SKA2-208ENST00000583927 CT45A10P0DMU9 189 aa7.02□□□□□ -1.29
SKA2-208ENST00000583927 PYYP10082 97 aa7.02□□□□□ -1.29
SKA2-208ENST00000583927 LEPP41159 167 aa7.02□□□□□ -1.29
SKA2-208ENST00000583927 DAD1P61803 113 aa7.02□□□□□ -1.29
SKA2-208ENST00000583927 C9orf47Q6ZRZ4 202 aa7.02□□□□□ -1.29
SKA2-208ENST00000583927 ZNF767PQ75MW2 155 aa7.02□□□□□ -1.29
SKA2-208ENST00000583927 MIR17HGQ75NE6 70 aa7.02□□□□□ -1.29
SKA2-208ENST00000583927 SCGB1C1Q8TD33 95 aa7.02□□□□□ -1.29
SKA2-208ENST00000583927 RNASE8Q8TDE3 154 aaKnown RBP7.02□□□□□ -1.29
SKA2-208ENST00000583927 FAM19A4Q96LR4 140 aa7.02□□□□□ -1.29
SKA2-208ENST00000583927 LINC01587Q99440 93 aa7.02□□□□□ -1.29
SKA2-208ENST00000583927 TIMM9Q9Y5J7 89 aa7.02□□□□□ -1.29
SKA2-208ENST00000583927 FAT2Q9NYQ8 4349 aa7.02□□□□□ -1.29
SKA2-208ENST00000583927 KLLNB2CW77 178 aa7.01□□□□□ -1.29
SKA2-208ENST00000583927 M0R3E3 92 aa7.01□□□□□ -1.29
SKA2-208ENST00000583927 SLC25A5P05141 298 aaKnown RBP7.01□□□□□ -1.29
SKA2-208ENST00000583927 CRISP2P16562 243 aa7.01□□□□□ -1.29
SKA2-208ENST00000583927 AZU1P20160 251 aa7.01□□□□□ -1.29
SKA2-208ENST00000583927 TAS2R45P59539 299 aa7.01□□□□□ -1.29
SKA2-208ENST00000583927 GFI1BQ5VTD9 330 aa7.01□□□□□ -1.29
SKA2-208ENST00000583927 IQCF2Q8IXL9 164 aa7.01□□□□□ -1.29
SKA2-208ENST00000583927 ARL6IP6Q8N6S5 226 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms