RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	CCDC28A	Q8IWP9	274 aa		6	□□□□□ -1.45
NUP85-223	ENST00000583877		Q8N3U1	123 aa		6	□□□□□ -1.45
NUP85-223	ENST00000583877	OR8A1	Q8NGG7	326 aa		6	□□□□□ -1.45
NUP85-223	ENST00000583877	SDHC	Q99643	169 aa	Predicted RBP	6	□□□□□ -1.45
NUP85-223	ENST00000583877	C20orf144	Q9BQM9	153 aa		6	□□□□□ -1.45
NUP85-223	ENST00000583877	SMCO3	A2RU48	225 aa		5.99	□□□□□ -1.45
NUP85-223	ENST00000583877	FABP12	A6NFH5	140 aa		5.99	□□□□□ -1.45
NUP85-223	ENST00000583877		H7BYZ3	331 aa		5.99	□□□□□ -1.45
NUP85-223	ENST00000583877	CTDSP2	O14595	271 aa		5.99	□□□□□ -1.45
NUP85-223	ENST00000583877	MED6	O75586	246 aa		5.99	□□□□□ -1.45
NUP85-223	ENST00000583877	IFNA5	P01569	189 aa		5.99	□□□□□ -1.45
NUP85-223	ENST00000583877	RLN2	P04090	185 aa		5.99	□□□□□ -1.45
NUP85-223	ENST00000583877	OR5G3	P0C626	314 aa		5.99	□□□□□ -1.45
NUP85-223	ENST00000583877	FUS	P35637	526 aa	Known RBP eCLIP	5.99	□□□□□ -1.45
NUP85-223	ENST00000583877	IFITM2	Q01629	132 aa		5.99	□□□□□ -1.45
NUP85-223	ENST00000583877	OR51S1	Q8NGJ8	323 aa		5.99	□□□□□ -1.45
NUP85-223	ENST00000583877	ENKUR	Q8TC29	256 aa		5.99	□□□□□ -1.45
NUP85-223	ENST00000583877	C18orf15	Q96N68	181 aa		5.99	□□□□□ -1.45
NUP85-223	ENST00000583877	SCGB3A2	Q96PL1	93 aa		5.99	□□□□□ -1.45
NUP85-223	ENST00000583877	PRRT1	Q99946	306 aa		5.99	□□□□□ -1.45
NUP85-223	ENST00000583877	SCP2D1	Q9UJQ7	156 aa		5.99	□□□□□ -1.45
NUP85-223	ENST00000583877	SNURFL	B1AK76	121 aa		5.98	□□□□□ -1.45
NUP85-223	ENST00000583877	PRSS46	E5RG02	174 aa		5.98	□□□□□ -1.45
NUP85-223	ENST00000583877		H3BRN7	92 aa		5.98	□□□□□ -1.45
NUP85-223	ENST00000583877	WRB	O00258	174 aa		5.98	□□□□□ -1.45
NUP85-223	ENST00000583877	SIVA1	O15304	175 aa		5.98	□□□□□ -1.45
NUP85-223	ENST00000583877	PITX3	O75364	302 aa		5.98	□□□□□ -1.45
NUP85-223	ENST00000583877	IL5	P05113	134 aa		5.98	□□□□□ -1.45
NUP85-223	ENST00000583877	RPL7	P18124	248 aa	Known RBP	5.98	□□□□□ -1.45
NUP85-223	ENST00000583877	CXCL3	P19876	107 aa		5.98	□□□□□ -1.45
NUP85-223	ENST00000583877	ANXA7	P20073	488 aa	Known RBP	5.98	□□□□□ -1.45
NUP85-223	ENST00000583877	SRPX	P78539	464 aa		5.98	□□□□□ -1.45
NUP85-223	ENST00000583877	MRPS10	P82664	201 aa	Known RBP	5.98	□□□□□ -1.45
NUP85-223	ENST00000583877	CD300C	Q08708	224 aa		5.98	□□□□□ -1.45
NUP85-223	ENST00000583877	PSG3	Q16557	428 aa		5.98	□□□□□ -1.45
NUP85-223	ENST00000583877	TRIQK	Q629K1	86 aa		5.98	□□□□□ -1.45
NUP85-223	ENST00000583877	TMEM182	Q6ZP80	229 aa	Predicted RBP	5.98	□□□□□ -1.45
NUP85-223	ENST00000583877	NRARP	Q7Z6K4	114 aa		5.98	□□□□□ -1.45
NUP85-223	ENST00000583877	ST6GAL2	Q96JF0	529 aa		5.98	□□□□□ -1.45
NUP85-223	ENST00000583877	SOST	Q9BQB4	213 aa		5.98	□□□□□ -1.45
NUP85-223	ENST00000583877	MCUB	Q9NWR8	336 aa		5.98	□□□□□ -1.45
NUP85-223	ENST00000583877	HIGD1A	Q9Y241	93 aa		5.98	□□□□□ -1.45
NUP85-223	ENST00000583877		A0A087X0K7	114 aa		5.97	□□□□□ -1.45
NUP85-223	ENST00000583877		A0A096LPF7	62 aa		5.97	□□□□□ -1.45
NUP85-223	ENST00000583877	PIGBOS1	A0A0B4J2F0	54 aa		5.97	□□□□□ -1.45
NUP85-223	ENST00000583877	DUXB	A0A1W2PPF3	345 aa		5.97	□□□□□ -1.45
NUP85-223	ENST00000583877		J3KRW8	73 aa		5.97	□□□□□ -1.45
NUP85-223	ENST00000583877	C1QB	P02746	253 aa		5.97	□□□□□ -1.45
NUP85-223	ENST00000583877	KRTAP10-1	P60331	282 aa		5.97	□□□□□ -1.45
NUP85-223	ENST00000583877	IL18	Q14116	193 aa		5.97	□□□□□ -1.45
NUP85-223	ENST00000583877	ICAM4	Q14773	271 aa		5.97	□□□□□ -1.45
NUP85-223	ENST00000583877	RNF151	Q2KHN1	245 aa		5.97	□□□□□ -1.45
NUP85-223	ENST00000583877	SPANXN5	Q5MJ07	72 aa		5.97	□□□□□ -1.45
NUP85-223	ENST00000583877	NFE4	Q86UQ8	179 aa		5.97	□□□□□ -1.45
NUP85-223	ENST00000583877	SMIM4	Q8WVI0	70 aa		5.97	□□□□□ -1.45
NUP85-223	ENST00000583877	RPUSD4	Q96CM3	377 aa	Known RBP	5.97	□□□□□ -1.45
NUP85-223	ENST00000583877	DIRAS2	Q96HU8	199 aa		5.97	□□□□□ -1.45
NUP85-223	ENST00000583877	CIB3	Q96Q77	187 aa	Predicted RBP	5.97	□□□□□ -1.45
NUP85-223	ENST00000583877	SHANK2-AS3	Q9BTD1	123 aa		5.97	□□□□□ -1.45
NUP85-223	ENST00000583877	C1orf43	Q9BWL3	253 aa		5.97	□□□□□ -1.45
NUP85-223	ENST00000583877	UBR4	Q5T4S7	5183 aa		5.96	□□□□□ -1.45
NUP85-223	ENST00000583877		H3BP45	60 aa		5.96	□□□□□ -1.46
NUP85-223	ENST00000583877	HYPM	O75409	117 aa		5.96	□□□□□ -1.46
NUP85-223	ENST00000583877	SMR3B	P02814	79 aa	Predicted RBP	5.96	□□□□□ -1.46
NUP85-223	ENST00000583877	INPP1	P49441	399 aa		5.96	□□□□□ -1.46
NUP85-223	ENST00000583877	DAZ2	Q13117	558 aa	Known RBP	5.96	□□□□□ -1.46
NUP85-223	ENST00000583877	BAK1	Q16611	211 aa		5.96	□□□□□ -1.46
NUP85-223	ENST00000583877	PYDC2	Q56P42	97 aa		5.96	□□□□□ -1.46
NUP85-223	ENST00000583877	CYP2G1P	Q6ZSU1	146 aa		5.96	□□□□□ -1.46
NUP85-223	ENST00000583877	TMED4	Q7Z7H5	227 aa		5.96	□□□□□ -1.46
NUP85-223	ENST00000583877	S100A7A	Q86SG5	101 aa		5.96	□□□□□ -1.46
NUP85-223	ENST00000583877	VSIG2	Q96IQ7	327 aa		5.96	□□□□□ -1.46
NUP85-223	ENST00000583877	HYLS1	Q96M11	299 aa		5.96	□□□□□ -1.46
NUP85-223	ENST00000583877	MARVELD1	Q9BSK0	173 aa		5.96	□□□□□ -1.46
NUP85-223	ENST00000583877	PARD6G	Q9BYG4	376 aa	Predicted RBP	5.96	□□□□□ -1.46
NUP85-223	ENST00000583877	TMPRSS5	Q9H3S3	457 aa		5.96	□□□□□ -1.46
NUP85-223	ENST00000583877	MDFIC	Q9P1T7	246 aa		5.96	□□□□□ -1.46
NUP85-223	ENST00000583877	STRAP	Q9Y3F4	350 aa	Known RBP	5.96	□□□□□ -1.46
NUP85-223	ENST00000583877	TRGV2	A0A075B6R0	118 aa		5.95	□□□□□ -1.46
NUP85-223	ENST00000583877		A0A087WTM6	91 aa		5.95	□□□□□ -1.46
NUP85-223	ENST00000583877	CTDSPL	O15194	276 aa		5.95	□□□□□ -1.46
NUP85-223	ENST00000583877	LYRM1	O43325	122 aa		5.95	□□□□□ -1.46
NUP85-223	ENST00000583877	SYNGR2	O43760	224 aa		5.95	□□□□□ -1.46
NUP85-223	ENST00000583877	NXPH4	O95158	308 aa		5.95	□□□□□ -1.46
NUP85-223	ENST00000583877	SNRPC	P09234	159 aa	Known RBP	5.95	□□□□□ -1.46
NUP85-223	ENST00000583877	LINC00869	P0C866	280 aa		5.95	□□□□□ -1.46
NUP85-223	ENST00000583877	DNAH10OS	P0CZ25	163 aa		5.95	□□□□□ -1.46
NUP85-223	ENST00000583877	SLC25A6	P12236	298 aa		5.95	□□□□□ -1.46
NUP85-223	ENST00000583877	CXCL2	P19875	107 aa		5.95	□□□□□ -1.46
NUP85-223	ENST00000583877	PLP1	P60201	277 aa		5.95	□□□□□ -1.46
NUP85-223	ENST00000583877	SELENOT	P62341	195 aa		5.95	□□□□□ -1.46
NUP85-223	ENST00000583877	GFI1B	Q5VTD9	330 aa		5.95	□□□□□ -1.46
NUP85-223	ENST00000583877		Q6ZSN1	163 aa		5.95	□□□□□ -1.46
NUP85-223	ENST00000583877		Q6ZTI0	123 aa		5.95	□□□□□ -1.46
NUP85-223	ENST00000583877	ACOT7L	Q6ZUV0	252 aa		5.95	□□□□□ -1.46
NUP85-223	ENST00000583877	MIXL1	Q9H2W2	232 aa		5.95	□□□□□ -1.46
NUP85-223	ENST00000583877	TNFRSF18	Q9Y5U5	241 aa		5.95	□□□□□ -1.46
NUP85-223	ENST00000583877	HMCN2	Q8NDA2	5059 aa		5.95	□□□□□ -1.46
NUP85-223	ENST00000583877	LRP1	Q07954	4544 aa	Known RBP	5.95	□□□□□ -1.46
NUP85-223	ENST00000583877	FAM240B	A0A1B0GVZ2	78 aa		5.94	□□□□□ -1.46

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