RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 GATA2P23769 480 aaPredicted RBP5.43□□□□□ -1.54
SMCHD1-210ENST00000583800 TAGLN2P37802 199 aaKnown RBP5.43□□□□□ -1.54
SMCHD1-210ENST00000583800 ATP5G3P48201 142 aa5.43□□□□□ -1.54
SMCHD1-210ENST00000583800 CCL18P55774 89 aa5.43□□□□□ -1.54
SMCHD1-210ENST00000583800 MRPS10P82664 201 aaKnown RBP5.43□□□□□ -1.54
SMCHD1-210ENST00000583800 FGL1Q08830 312 aa5.43□□□□□ -1.54
SMCHD1-210ENST00000583800 CLVS1Q8IUQ0 354 aaPredicted RBP5.43□□□□□ -1.54
SMCHD1-210ENST00000583800 THAP8Q8NA92 274 aa5.43□□□□□ -1.54
SMCHD1-210ENST00000583800 PRRT1Q99946 306 aa5.43□□□□□ -1.54
SMCHD1-210ENST00000583800 KRTAP1-5Q9BYS1 174 aa5.43□□□□□ -1.54
SMCHD1-210ENST00000583800 SLC25A39Q9BZJ4 359 aaPredicted RBP5.43□□□□□ -1.54
SMCHD1-210ENST00000583800 SCRT2Q9NQ03 307 aa5.43□□□□□ -1.54
SMCHD1-210ENST00000583800 KCNIP3Q9Y2W7 256 aa5.43□□□□□ -1.54
SMCHD1-210ENST00000583800 DUSP14O95147 198 aaKnown RBP5.42□□□□□ -1.54
SMCHD1-210ENST00000583800 SMIM18P0DKX4 95 aa5.42□□□□□ -1.54
SMCHD1-210ENST00000583800 ORM2P19652 201 aa5.42□□□□□ -1.54
SMCHD1-210ENST00000583800 TSPOP30536 169 aa5.42□□□□□ -1.54
SMCHD1-210ENST00000583800 ATP5IP56385 69 aaPredicted RBP5.42□□□□□ -1.54
SMCHD1-210ENST00000583800 RAB11AP62491 216 aa5.42□□□□□ -1.54
SMCHD1-210ENST00000583800 IL18Q14116 193 aa5.42□□□□□ -1.54
SMCHD1-210ENST00000583800 CLINT1Q14677 625 aa5.42□□□□□ -1.54
SMCHD1-210ENST00000583800 SSX7Q7RTT5 188 aa5.42□□□□□ -1.54
SMCHD1-210ENST00000583800 GPR141Q7Z602 305 aa5.42□□□□□ -1.54
SMCHD1-210ENST00000583800 ZNF738Q8NE65 137 aa5.42□□□□□ -1.54
SMCHD1-210ENST00000583800 OR1B1Q8NGR6 318 aa5.42□□□□□ -1.54
SMCHD1-210ENST00000583800 MLST8Q9BVC4 326 aa5.42□□□□□ -1.54
SMCHD1-210ENST00000583800 ANKRD20A5PA0PJZ0 165 aa5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 PRSS46E5RG02 174 aa5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 H3BRN7 92 aa5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 PITX3O75364 302 aa5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 CFDP00746 253 aaPredicted RBP5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 ANXA3P12429 323 aa5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 HTN1P15515 57 aa5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 B2MP61769 119 aa5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 SRPXP78539 464 aa5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 HIST1H1AQ02539 215 aaPredicted RBP5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 PIK3CD-AS1Q5SR53 167 aa5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 BPIFCQ8NFQ6 507 aa5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 C16orf74Q96GX8 76 aa5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 UHRF2Q96PU4 802 aa5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 LINC01587Q99440 93 aa5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 TMEM147Q9BVK8 224 aa5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 GSN-AS1Q9NRJ2 163 aa5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 MCUBQ9NWR8 336 aa5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 NDUFA13Q9P0J0 144 aa5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 SCP2D1Q9UJQ7 156 aa5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 FAT1Q14517 4588 aa5.41□□□□□ -1.54
SMCHD1-210ENST00000583800 A0A0J9YY99 117 aa5.4□□□□□ -1.54
SMCHD1-210ENST00000583800 A0A0U1RRA0 63 aa5.4□□□□□ -1.54
SMCHD1-210ENST00000583800 FAM25EA8MYX2 175 aa5.4□□□□□ -1.54
SMCHD1-210ENST00000583800 H3BP45 60 aa5.4□□□□□ -1.54
SMCHD1-210ENST00000583800 ATP6V1G1O75348 118 aa5.4□□□□□ -1.54
SMCHD1-210ENST00000583800 TAS2R60P59551 318 aa5.4□□□□□ -1.54
SMCHD1-210ENST00000583800 RHOBP62745 196 aa5.4□□□□□ -1.54
SMCHD1-210ENST00000583800 AKR1C1Q04828 323 aa5.4□□□□□ -1.54
SMCHD1-210ENST00000583800 FOXI1Q12951 378 aa5.4□□□□□ -1.54
SMCHD1-210ENST00000583800 SPCS2Q15005 226 aa5.4□□□□□ -1.54
SMCHD1-210ENST00000583800 ACOT7LQ6ZUV0 252 aa5.4□□□□□ -1.54
SMCHD1-210ENST00000583800 Q75L30 129 aa5.4□□□□□ -1.54
SMCHD1-210ENST00000583800 TMED4Q7Z7H5 227 aa5.4□□□□□ -1.54
SMCHD1-210ENST00000583800 OR4D5Q8NGN0 318 aa5.4□□□□□ -1.54
SMCHD1-210ENST00000583800 DIRAS2Q96HU8 199 aa5.4□□□□□ -1.54
SMCHD1-210ENST00000583800 GPR82Q96P67 336 aa5.4□□□□□ -1.54
SMCHD1-210ENST00000583800 SCGB3A2Q96PL1 93 aa5.4□□□□□ -1.54
SMCHD1-210ENST00000583800 Q9H8V8 135 aa5.4□□□□□ -1.54
SMCHD1-210ENST00000583800 NOP10Q9NPE3 64 aaKnown RBP5.4□□□□□ -1.54
SMCHD1-210ENST00000583800 TRAV26-1A0A087WT03 109 aa5.39□□□□□ -1.55
SMCHD1-210ENST00000583800 DUXBA0A1W2PPF3 345 aa5.39□□□□□ -1.55
SMCHD1-210ENST00000583800 WRBO00258 174 aa5.39□□□□□ -1.55
SMCHD1-210ENST00000583800 CXCL3P19876 107 aa5.39□□□□□ -1.55
SMCHD1-210ENST00000583800 OR5I1Q13606 314 aa5.39□□□□□ -1.55
SMCHD1-210ENST00000583800 TTC32Q5I0X7 151 aa5.39□□□□□ -1.55
SMCHD1-210ENST00000583800 SPANXN5Q5MJ07 72 aa5.39□□□□□ -1.55
SMCHD1-210ENST00000583800 CD164L2Q6UWJ8 174 aa5.39□□□□□ -1.55
SMCHD1-210ENST00000583800 TMEM144Q7Z5S9 345 aa5.39□□□□□ -1.55
SMCHD1-210ENST00000583800 TMEM256Q8N2U0 113 aa5.39□□□□□ -1.55
SMCHD1-210ENST00000583800 OR8A1Q8NGG7 326 aa5.39□□□□□ -1.55
SMCHD1-210ENST00000583800 THAP6Q8TBB0 222 aa5.39□□□□□ -1.55
SMCHD1-210ENST00000583800 GNPNAT1Q96EK6 184 aaPredicted RBP5.39□□□□□ -1.55
SMCHD1-210ENST00000583800 SHANK2-AS3Q9BTD1 123 aa5.39□□□□□ -1.55
SMCHD1-210ENST00000583800 PARD6GQ9BYG4 376 aaPredicted RBP5.39□□□□□ -1.55
SMCHD1-210ENST00000583800 Q9H3A6 140 aa5.39□□□□□ -1.55
SMCHD1-210ENST00000583800 WDR83OSQ9Y284 106 aa5.39□□□□□ -1.55
SMCHD1-210ENST00000583800 TIMM8BQ9Y5J9 83 aaPredicted RBP5.39□□□□□ -1.55
SMCHD1-210ENST00000583800 SMCO3A2RU48 225 aa5.38□□□□□ -1.55
SMCHD1-210ENST00000583800 SYNGR2O43760 224 aa5.38□□□□□ -1.55
SMCHD1-210ENST00000583800 MED6O75586 246 aa5.38□□□□□ -1.55
SMCHD1-210ENST00000583800 IL5P05113 134 aa5.38□□□□□ -1.55
SMCHD1-210ENST00000583800 LINC00869P0C866 280 aa5.38□□□□□ -1.55
SMCHD1-210ENST00000583800 RPL7P18124 248 aaKnown RBP5.38□□□□□ -1.55
SMCHD1-210ENST00000583800 S100A7P31151 101 aa5.38□□□□□ -1.55
SMCHD1-210ENST00000583800 CDKN1BP46527 198 aa5.38□□□□□ -1.55
SMCHD1-210ENST00000583800 SSTP61278 116 aa5.38□□□□□ -1.55
SMCHD1-210ENST00000583800 PSG3Q16557 428 aa5.38□□□□□ -1.55
SMCHD1-210ENST00000583800 CYP2G1PQ6ZSU1 146 aa5.38□□□□□ -1.55
SMCHD1-210ENST00000583800 RXFP4Q8TDU9 374 aa5.38□□□□□ -1.55
SMCHD1-210ENST00000583800 TMEM263Q8WUH6 116 aaKnown RBP5.38□□□□□ -1.55
SMCHD1-210ENST00000583800 C8orf49Q96NF6 230 aa5.38□□□□□ -1.55
SMCHD1-210ENST00000583800 CIB3Q96Q77 187 aaPredicted RBP5.38□□□□□ -1.55
SMCHD1-210ENST00000583800 UPK3BQ9BT76 320 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms