RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	ZNF701	M0R085	212 aa	Predicted RBP	10.51	□□□□□ -0.73
SREBF1-222	ENST00000583732	CCS	O14618	274 aa		10.51	□□□□□ -0.73
SREBF1-222	ENST00000583732	M6PR	P20645	277 aa		10.51	□□□□□ -0.73
SREBF1-222	ENST00000583732	C10orf113	Q5VZT2	155 aa		10.51	□□□□□ -0.73
SREBF1-222	ENST00000583732	RXFP4	Q8TDU9	374 aa		10.51	□□□□□ -0.73
SREBF1-222	ENST00000583732	TMEM37	Q8WXS4	190 aa		10.51	□□□□□ -0.73
SREBF1-222	ENST00000583732	C20orf144	Q9BQM9	153 aa		10.51	□□□□□ -0.73
SREBF1-222	ENST00000583732	TRAV5	A0A0B4J249	113 aa		10.5	□□□□□ -0.73
SREBF1-222	ENST00000583732	C7orf66	A4D0T2	115 aa		10.5	□□□□□ -0.73
SREBF1-222	ENST00000583732		H3BQ15	152 aa		10.5	□□□□□ -0.73
SREBF1-222	ENST00000583732		L7N2F9	121 aa		10.5	□□□□□ -0.73
SREBF1-222	ENST00000583732	MBP	P02686	304 aa	Predicted RBP	10.5	□□□□□ -0.73
SREBF1-222	ENST00000583732	BTC	P35070	178 aa		10.5	□□□□□ -0.73
SREBF1-222	ENST00000583732	TAS2R30	P59541	319 aa		10.5	□□□□□ -0.73
SREBF1-222	ENST00000583732	VAMP2	P63027	116 aa		10.5	□□□□□ -0.73
SREBF1-222	ENST00000583732	LINC00612	Q8N6U2	182 aa		10.5	□□□□□ -0.73
SREBF1-222	ENST00000583732	TMPRSS5	Q9H3S3	457 aa		10.5	□□□□□ -0.73
SREBF1-222	ENST00000583732	LSM5	Q9Y4Y9	91 aa	Known RBP	10.5	□□□□□ -0.73
SREBF1-222	ENST00000583732	PXMP4	Q9Y6I8	212 aa		10.5	□□□□□ -0.73
SREBF1-222	ENST00000583732	DNAH5	Q8TE73	4624 aa		10.5	□□□□□ -0.73
SREBF1-222	ENST00000583732	CT45A10	P0DMU9	189 aa		10.49	□□□□□ -0.73
SREBF1-222	ENST00000583732	IGLC2	P0DOY2	106 aa		10.49	□□□□□ -0.73
SREBF1-222	ENST00000583732	LEP	P41159	167 aa		10.49	□□□□□ -0.73
SREBF1-222	ENST00000583732	CAMLG	P49069	296 aa		10.49	□□□□□ -0.73
SREBF1-222	ENST00000583732	BCAP31	P51572	246 aa		10.49	□□□□□ -0.73
SREBF1-222	ENST00000583732	ESRG	Q1W209	222 aa		10.49	□□□□□ -0.73
SREBF1-222	ENST00000583732	TTC32	Q5I0X7	151 aa		10.49	□□□□□ -0.73
SREBF1-222	ENST00000583732	MIC13	Q5XKP0	118 aa		10.49	□□□□□ -0.73
SREBF1-222	ENST00000583732	CENPX	A8MT69	81 aa		10.48	□□□□□ -0.73
SREBF1-222	ENST00000583732	FAM25E	A8MYX2	175 aa		10.48	□□□□□ -0.73
SREBF1-222	ENST00000583732		Q6ZTI0	123 aa		10.48	□□□□□ -0.73
SREBF1-222	ENST00000583732	NRARP	Q7Z6K4	114 aa		10.48	□□□□□ -0.73
SREBF1-222	ENST00000583732	GGACT	Q9BVM4	153 aa		10.48	□□□□□ -0.73
SREBF1-222	ENST00000583732		Q9H3A6	140 aa		10.48	□□□□□ -0.73
SREBF1-222	ENST00000583732	ZNF586	Q9NXT0	402 aa		10.48	□□□□□ -0.73
SREBF1-222	ENST00000583732	NPIPB6	E9PJ23	425 aa		10.47	□□□□□ -0.73
SREBF1-222	ENST00000583732	CST7	O76096	145 aa		10.47	□□□□□ -0.73
SREBF1-222	ENST00000583732	CAV2	P51636	162 aa		10.47	□□□□□ -0.73
SREBF1-222	ENST00000583732	KRTAP10-2	P60368	255 aa		10.47	□□□□□ -0.73
SREBF1-222	ENST00000583732		Q6ZRG5	221 aa		10.47	□□□□□ -0.73
SREBF1-222	ENST00000583732	ZNF431	Q8TF32	576 aa	Predicted RBP	10.47	□□□□□ -0.73
SREBF1-222	ENST00000583732	MITD1	Q8WV92	249 aa		10.47	□□□□□ -0.73
SREBF1-222	ENST00000583732	SAT2	Q96F10	170 aa	Predicted RBP	10.47	□□□□□ -0.73
SREBF1-222	ENST00000583732	SDHC	Q99643	169 aa	Predicted RBP	10.47	□□□□□ -0.73
SREBF1-222	ENST00000583732	RBM38	Q9H0Z9	239 aa	Known RBP	10.47	□□□□□ -0.73
SREBF1-222	ENST00000583732	MRPS16	Q9Y3D3	137 aa	Known RBP	10.47	□□□□□ -0.73
SREBF1-222	ENST00000583732	UBE2L5P	A0A1B0GUS4	154 aa		10.46	□□□□□ -0.73
SREBF1-222	ENST00000583732	ERCC8	Q13216	396 aa		10.46	□□□□□ -0.73
SREBF1-222	ENST00000583732	RAB31	Q13636	194 aa		10.46	□□□□□ -0.73
SREBF1-222	ENST00000583732	ZNF846	Q147U1	533 aa		10.46	□□□□□ -0.73
SREBF1-222	ENST00000583732	OR1L4	Q8NGR5	311 aa		10.46	□□□□□ -0.73
SREBF1-222	ENST00000583732	ZNF503	Q96F45	646 aa		10.46	□□□□□ -0.73
SREBF1-222	ENST00000583732	UPK3B	Q9BT76	320 aa		10.46	□□□□□ -0.73
SREBF1-222	ENST00000583732	C20orf85	Q9H1P6	137 aa		10.46	□□□□□ -0.73
SREBF1-222	ENST00000583732	DNAJC4	Q9NNZ3	241 aa		10.46	□□□□□ -0.73
SREBF1-222	ENST00000583732	SCRT2	Q9NQ03	307 aa		10.46	□□□□□ -0.73
SREBF1-222	ENST00000583732	TRGV2	A0A075B6R0	118 aa		10.45	□□□□□ -0.74
SREBF1-222	ENST00000583732	FAM24A	A6NFZ4	105 aa		10.45	□□□□□ -0.74
SREBF1-222	ENST00000583732		M0R3E3	92 aa		10.45	□□□□□ -0.74
SREBF1-222	ENST00000583732	IL7	P13232	177 aa		10.45	□□□□□ -0.74
SREBF1-222	ENST00000583732	BAX	Q07812	192 aa		10.45	□□□□□ -0.74
SREBF1-222	ENST00000583732	BTN1A1	Q13410	526 aa		10.45	□□□□□ -0.74
SREBF1-222	ENST00000583732		Q8N1X5	172 aa		10.45	□□□□□ -0.74
SREBF1-222	ENST00000583732	ODF3	Q96PU9	254 aa		10.45	□□□□□ -0.74
SREBF1-222	ENST00000583732	PYGO2	Q9BRQ0	406 aa		10.45	□□□□□ -0.74
SREBF1-222	ENST00000583732	GSN-AS1	Q9NRJ2	163 aa		10.45	□□□□□ -0.74
SREBF1-222	ENST00000583732	UQCC1	Q9NVA1	299 aa		10.45	□□□□□ -0.74
SREBF1-222	ENST00000583732	TRGV1	A0A0A0MS02	117 aa		10.44	□□□□□ -0.74
SREBF1-222	ENST00000583732	C5orf51	A6NDU8	294 aa		10.44	□□□□□ -0.74
SREBF1-222	ENST00000583732	GUK1	Q16774	197 aa		10.44	□□□□□ -0.74
SREBF1-222	ENST00000583732	PFDN5	Q99471	154 aa		10.44	□□□□□ -0.74
SREBF1-222	ENST00000583732	SEC22C	Q9BRL7	303 aa		10.44	□□□□□ -0.74
SREBF1-222	ENST00000583732	WDR83OS	Q9Y284	106 aa		10.44	□□□□□ -0.74
SREBF1-222	ENST00000583732	TRAV6	A0A075B6T7	132 aa		10.43	□□□□□ -0.74
SREBF1-222	ENST00000583732		A0A096LPF7	62 aa		10.43	□□□□□ -0.74
SREBF1-222	ENST00000583732		A0A1W2PPQ1	181 aa		10.43	□□□□□ -0.74
SREBF1-222	ENST00000583732	C7orf71	A4D174	169 aa		10.43	□□□□□ -0.74
SREBF1-222	ENST00000583732		H3BNG1	76 aa		10.43	□□□□□ -0.74
SREBF1-222	ENST00000583732	SLC25A5	P05141	298 aa	Known RBP	10.43	□□□□□ -0.74
SREBF1-222	ENST00000583732	LINC00315	P59091	139 aa		10.43	□□□□□ -0.74
SREBF1-222	ENST00000583732	S100A10	P60903	97 aa		10.43	□□□□□ -0.74
SREBF1-222	ENST00000583732	DAZ2	Q13117	558 aa	Known RBP	10.43	□□□□□ -0.74
SREBF1-222	ENST00000583732	VSIG2	Q96IQ7	327 aa		10.43	□□□□□ -0.74
SREBF1-222	ENST00000583732	SLC39A9	Q9NUM3	307 aa		10.43	□□□□□ -0.74
SREBF1-222	ENST00000583732	PYY	P10082	97 aa		10.42	□□□□□ -0.74
SREBF1-222	ENST00000583732	RNASE4	P34096	147 aa	Known RBP	10.42	□□□□□ -0.74
SREBF1-222	ENST00000583732	CD300C	Q08708	224 aa		10.42	□□□□□ -0.74
SREBF1-222	ENST00000583732	C11orf72	Q8NBR9	251 aa		10.42	□□□□□ -0.74
SREBF1-222	ENST00000583732	ZNF680	Q8NEM1	530 aa		10.42	□□□□□ -0.74
SREBF1-222	ENST00000583732	BLNK	Q8WV28	456 aa		10.42	□□□□□ -0.74
SREBF1-222	ENST00000583732	C11orf1	Q9H5F2	150 aa		10.42	□□□□□ -0.74
SREBF1-222	ENST00000583732	FUT9	Q9Y231	359 aa		10.42	□□□□□ -0.74
SREBF1-222	ENST00000583732	TIMM9	Q9Y5J7	89 aa		10.42	□□□□□ -0.74
SREBF1-222	ENST00000583732	TRBV19	A0A075B6N1	114 aa		10.41	□□□□□ -0.74
SREBF1-222	ENST00000583732	IGSF23	A1L1A6	192 aa		10.41	□□□□□ -0.74
SREBF1-222	ENST00000583732	ZNF253	O75346	499 aa		10.41	□□□□□ -0.74
SREBF1-222	ENST00000583732	IGHV3-53	P01767	116 aa		10.41	□□□□□ -0.74
SREBF1-222	ENST00000583732	PVALB	P20472	110 aa	Predicted RBP	10.41	□□□□□ -0.74
SREBF1-222	ENST00000583732	FGF7	P21781	194 aa		10.41	□□□□□ -0.74
SREBF1-222	ENST00000583732	FUS	P35637	526 aa	Known RBP eCLIP	10.41	□□□□□ -0.74	4e-6	■□□□□ 11.3

Retrieved 100 of 20,778 RNA–protein pairs in 2842.4 ms