RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 DEFB125Q8N687 156 aa6.9□□□□□ -1.3
UBBP4-201ENST00000583708 ZNF738Q8NE65 137 aa6.9□□□□□ -1.3
UBBP4-201ENST00000583708 OR10J6PQ8NGY7 276 aa6.9□□□□□ -1.3
UBBP4-201ENST00000583708 CMTM2Q8TAZ6 248 aa6.9□□□□□ -1.3
UBBP4-201ENST00000583708 MRAPQ8TCY5 172 aa6.9□□□□□ -1.3
UBBP4-201ENST00000583708 RPUSD4Q96CM3 377 aaKnown RBP6.9□□□□□ -1.3
UBBP4-201ENST00000583708 ODF3Q96PU9 254 aa6.9□□□□□ -1.3
UBBP4-201ENST00000583708 SRD5A3Q9H8P0 318 aa6.9□□□□□ -1.3
UBBP4-201ENST00000583708 PPP1R14DQ9NXH3 145 aa6.9□□□□□ -1.3
UBBP4-201ENST00000583708 MEGF8Q7Z7M0 2845 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 F6UZH7 168 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 K7EQM0 130 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 NDUFS6O75380 124 aaKnown RBP6.89□□□□□ -1.31
UBBP4-201ENST00000583708 IFNA1P01562 189 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 OR10J4P0C629 311 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 TSPOP30536 169 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 RANP62826 216 aaKnown RBP6.89□□□□□ -1.31
UBBP4-201ENST00000583708 ICAM4Q14773 271 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 TEX261Q6UWH6 196 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 Q6ZWC4 215 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 TRPT1Q86TN4 253 aaKnown RBP6.89□□□□□ -1.31
UBBP4-201ENST00000583708 FAM24BQ8N5W8 94 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 C5orf17Q8NAS9 161 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 OR8A1Q8NGG7 326 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 BLNKQ8WV28 456 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 HIST1H2BAQ96A08 127 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 B9D2Q9BPU9 175 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 CSTL1Q9H114 145 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 Q9H3A6 140 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 MANBALQ9NQG1 85 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 PLA2G2EQ9NZK7 142 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 UBQLN2Q9UHD9 624 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 TP53TG1Q9Y2A0 90 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 LENEPQ9Y5L5 61 aa6.89□□□□□ -1.31
UBBP4-201ENST00000583708 PGPA6NDG6 321 aa6.88□□□□□ -1.31
UBBP4-201ENST00000583708 ZNF705EA8MWA4 302 aaPredicted RBP6.88□□□□□ -1.31
UBBP4-201ENST00000583708 S100A9P06702 114 aaKnown RBP6.88□□□□□ -1.31
UBBP4-201ENST00000583708 ACTL10Q5JWF8 245 aa6.88□□□□□ -1.31
UBBP4-201ENST00000583708 C9orf47Q6ZRZ4 202 aa6.88□□□□□ -1.31
UBBP4-201ENST00000583708 APRG1Q8IVJ8 170 aa6.88□□□□□ -1.31
UBBP4-201ENST00000583708 LYPD6BQ8NI32 183 aa6.88□□□□□ -1.31
UBBP4-201ENST00000583708 SELENOKQ9Y6D0 94 aa6.88□□□□□ -1.31
UBBP4-201ENST00000583708 RBMY1BA6NDE4 496 aaKnown RBP6.87□□□□□ -1.31
UBBP4-201ENST00000583708 RBMY1EA6NEQ0 496 aaKnown RBP6.87□□□□□ -1.31
UBBP4-201ENST00000583708 NPIPB6E9PJ23 425 aa6.87□□□□□ -1.31
UBBP4-201ENST00000583708 BOLA2-SMG1P6H3BVE0 249 aa6.87□□□□□ -1.31
UBBP4-201ENST00000583708 SLC17A3O00476 420 aa6.87□□□□□ -1.31
UBBP4-201ENST00000583708 HMGB3O15347 200 aaKnown RBP6.87□□□□□ -1.31
UBBP4-201ENST00000583708 RBMY1DP0C7P1 496 aaKnown RBP6.87□□□□□ -1.31
UBBP4-201ENST00000583708 FRMD6-AS1P0C7T7 363 aa6.87□□□□□ -1.31
UBBP4-201ENST00000583708 SUMO1P63165 101 aaKnown RBP6.87□□□□□ -1.31
UBBP4-201ENST00000583708 ALKAL2Q6UX46 152 aa6.87□□□□□ -1.31
UBBP4-201ENST00000583708 ZNF680Q8NEM1 530 aa6.87□□□□□ -1.31
UBBP4-201ENST00000583708 C20orf173Q96LM9 149 aa6.87□□□□□ -1.31
UBBP4-201ENST00000583708 C20orf144Q9BQM9 153 aa6.87□□□□□ -1.31
UBBP4-201ENST00000583708 BOLA1Q9Y3E2 137 aa6.87□□□□□ -1.31
UBBP4-201ENST00000583708 FAM74A7A6NL05 159 aa6.86□□□□□ -1.31
UBBP4-201ENST00000583708 DIRC3C9JPN6 131 aa6.86□□□□□ -1.31
UBBP4-201ENST00000583708 CNN1P51911 297 aaKnown RBP6.86□□□□□ -1.31
UBBP4-201ENST00000583708 HAGHQ16775 308 aa6.86□□□□□ -1.31
UBBP4-201ENST00000583708 TMEM78Q5T7P6 136 aa6.86□□□□□ -1.31
UBBP4-201ENST00000583708 ZNF767PQ75MW2 155 aa6.86□□□□□ -1.31
UBBP4-201ENST00000583708 SSX7Q7RTT5 188 aa6.86□□□□□ -1.31
UBBP4-201ENST00000583708 IQCF2Q8IXL9 164 aa6.86□□□□□ -1.31
UBBP4-201ENST00000583708 EXOC3-AS1Q8N2X6 119 aa6.86□□□□□ -1.31
UBBP4-201ENST00000583708 RNF182Q8N6D2 247 aa6.86□□□□□ -1.31
UBBP4-201ENST00000583708 CITED4Q96RK1 184 aa6.86□□□□□ -1.31
UBBP4-201ENST00000583708 SPATA25Q9BR10 227 aa6.86□□□□□ -1.31
UBBP4-201ENST00000583708 ATG101Q9BSB4 218 aa6.86□□□□□ -1.31
UBBP4-201ENST00000583708 ZMAT4Q9H898 229 aa6.86□□□□□ -1.31
UBBP4-201ENST00000583708 EPDR1Q9UM22 224 aa6.86□□□□□ -1.31
UBBP4-201ENST00000583708 TRBV6-1A0A0K0K1D8 114 aa6.85□□□□□ -1.31
UBBP4-201ENST00000583708 KNCNA6PVL3 124 aa6.85□□□□□ -1.31
UBBP4-201ENST00000583708 H3BTX0 84 aa6.85□□□□□ -1.31
UBBP4-201ENST00000583708 PDE6DO43924 150 aa6.85□□□□□ -1.31
UBBP4-201ENST00000583708 PRB2P02812 416 aaPredicted RBP6.85□□□□□ -1.31
UBBP4-201ENST00000583708 LEPP41159 167 aa6.85□□□□□ -1.31
UBBP4-201ENST00000583708 ZNF138P52744 262 aa6.85□□□□□ -1.31
UBBP4-201ENST00000583708 FGF8P55075 233 aaPredicted RBP6.85□□□□□ -1.31
UBBP4-201ENST00000583708 RAB14P61106 215 aa6.85□□□□□ -1.31
UBBP4-201ENST00000583708 HIST1H1AQ02539 215 aaPredicted RBP6.85□□□□□ -1.31
UBBP4-201ENST00000583708 SAPCD1Q5SSQ6 148 aa6.85□□□□□ -1.31
UBBP4-201ENST00000583708 IGFL4Q6B9Z1 124 aa6.85□□□□□ -1.31
UBBP4-201ENST00000583708 CCDC28AQ8IWP9 274 aa6.85□□□□□ -1.31
UBBP4-201ENST00000583708 TMEM256Q8N2U0 113 aa6.85□□□□□ -1.31
UBBP4-201ENST00000583708 CYB561D1Q8N8Q1 229 aa6.85□□□□□ -1.31
UBBP4-201ENST00000583708 OR4B1Q8NGF8 309 aa6.85□□□□□ -1.31
UBBP4-201ENST00000583708 TM2D3Q9BRN9 247 aa6.85□□□□□ -1.31
UBBP4-201ENST00000583708 SMDT1Q9H4I9 107 aa6.85□□□□□ -1.31
UBBP4-201ENST00000583708 SMIM9A6NGZ8 99 aa6.84□□□□□ -1.31
UBBP4-201ENST00000583708 ZNF705FA8MVS1 300 aaPredicted RBP6.84□□□□□ -1.31
UBBP4-201ENST00000583708 M0R3E3 92 aa6.84□□□□□ -1.31
UBBP4-201ENST00000583708 TCRAP04437 139 aa6.84□□□□□ -1.31
UBBP4-201ENST00000583708 CRISP2P16562 243 aa6.84□□□□□ -1.31
UBBP4-201ENST00000583708 CDKN1BP46527 198 aa6.84□□□□□ -1.31
UBBP4-201ENST00000583708 CST9LP1Q5W188 147 aa6.84□□□□□ -1.31
UBBP4-201ENST00000583708 AMTNQ6UX39 209 aa6.84□□□□□ -1.31
UBBP4-201ENST00000583708 TMEM75Q8N9X5 138 aa6.84□□□□□ -1.31
UBBP4-201ENST00000583708 IGF2BP2-AS1Q96M15 143 aa6.84□□□□□ -1.31
UBBP4-201ENST00000583708 NDFIP1Q9BT67 221 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms