RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 NUPR2A6NF83 97 aa18.01■□□□□ 0.47
TSEN54-209ENST00000583454 ZNF705FA8MVS1 300 aaPredicted RBP18.01■□□□□ 0.47
TSEN54-209ENST00000583454 ZNF705EA8MWA4 302 aaPredicted RBP18.01■□□□□ 0.47
TSEN54-209ENST00000583454 TAAR5O14804 337 aa18.01■□□□□ 0.47
TSEN54-209ENST00000583454 NBEAP1P0C6P0 100 aa18.01■□□□□ 0.47
TSEN54-209ENST00000583454 RAB2AP61019 212 aa18.01■□□□□ 0.47
TSEN54-209ENST00000583454 SERF2P84101 59 aa18.01■□□□□ 0.47
TSEN54-209ENST00000583454 RNF141Q8WVD5 230 aa18.01■□□□□ 0.47
TSEN54-209ENST00000583454 FXYD5Q96DB9 178 aa18.01■□□□□ 0.47
TSEN54-209ENST00000583454 CEMP1Q6PRD7 247 aaPredicted RBP18■□□□□ 0.47
TSEN54-209ENST00000583454 PRAC2D3DTV9 90 aa17.99■□□□□ 0.47
TSEN54-209ENST00000583454 FXYD7P58549 80 aa17.99■□□□□ 0.47
TSEN54-209ENST00000583454 TAS2R45P59539 299 aa17.99■□□□□ 0.47
TSEN54-209ENST00000583454 HIST1H1AQ02539 215 aaPredicted RBP17.99■□□□□ 0.47
TSEN54-209ENST00000583454 OR10G4Q8NGN3 311 aa17.99■□□□□ 0.47
TSEN54-209ENST00000583454 OR10G9Q8NGN4 311 aa17.99■□□□□ 0.47
TSEN54-209ENST00000583454 OR10G7Q8NGN6 311 aa17.99■□□□□ 0.47
TSEN54-209ENST00000583454 BLNKQ8WV28 456 aa17.99■□□□□ 0.47
TSEN54-209ENST00000583454 GNPNAT1Q96EK6 184 aaPredicted RBP17.99■□□□□ 0.47
TSEN54-209ENST00000583454 MRPL53Q96EL3 112 aaKnown RBP17.99■□□□□ 0.47
TSEN54-209ENST00000583454 ST6GAL2Q96JF0 529 aa17.99■□□□□ 0.47
TSEN54-209ENST00000583454 SH3BGRL3Q9H299 93 aa17.99■□□□□ 0.47
TSEN54-209ENST00000583454 CYTL1Q9NRR1 136 aa17.99■□□□□ 0.47
TSEN54-209ENST00000583454 OR7C2O60412 319 aa17.98■□□□□ 0.47
TSEN54-209ENST00000583454 ZNF345Q14585 488 aa17.98■□□□□ 0.47
TSEN54-209ENST00000583454 KHDC3LQ587J8 217 aa17.98■□□□□ 0.47
TSEN54-209ENST00000583454 KCNRGQ8N5I3 272 aa17.98■□□□□ 0.47
TSEN54-209ENST00000583454 PRELID1Q9Y255 219 aa17.98■□□□□ 0.47
TSEN54-209ENST00000583454 X6R8D5 127 aa17.98■□□□□ 0.47
TSEN54-209ENST00000583454 DNAH6Q9C0G6 4158 aa17.98■□□□□ 0.47
TSEN54-209ENST00000583454 A0A1W2PPV4 95 aa17.97■□□□□ 0.47
TSEN54-209ENST00000583454 LY6G6CO95867 125 aa17.97■□□□□ 0.47
TSEN54-209ENST00000583454 MBP02144 154 aa17.97■□□□□ 0.47
TSEN54-209ENST00000583454 OR10J4P0C629 311 aa17.97■□□□□ 0.47
TSEN54-209ENST00000583454 ZNF705AQ6ZN79 300 aaPredicted RBP17.97■□□□□ 0.47
TSEN54-209ENST00000583454 RPP25LQ8N5L8 163 aaKnown RBP17.97■□□□□ 0.47
TSEN54-209ENST00000583454 PRB4P10163 310 aaPredicted RBP17.96■□□□□ 0.47
TSEN54-209ENST00000583454 FAM122CQ6P4D5 195 aa17.96■□□□□ 0.47
TSEN54-209ENST00000583454 Q8NAQ8 132 aa17.96■□□□□ 0.47
TSEN54-209ENST00000583454 C11orf68Q9H3H3 251 aaKnown RBP17.96■□□□□ 0.47
TSEN54-209ENST00000583454 M0R3E3 92 aa17.95■□□□□ 0.46
TSEN54-209ENST00000583454 EIF3GO75821 320 aaKnown RBP eCLIP17.95■□□□□ 0.46
TSEN54-209ENST00000583454 AMBPP02760 352 aa17.95■□□□□ 0.46
TSEN54-209ENST00000583454 MIFP14174 115 aa17.95■□□□□ 0.46
TSEN54-209ENST00000583454 PQLC2Q6ZP29 291 aa17.95■□□□□ 0.46
TSEN54-209ENST00000583454 EXOC3-AS1Q8N2X6 119 aa17.95■□□□□ 0.46
TSEN54-209ENST00000583454 OR10J6PQ8NGY7 276 aa17.95■□□□□ 0.46
TSEN54-209ENST00000583454 UBE2L3P68036 154 aaKnown RBP17.94■□□□□ 0.46
TSEN54-209ENST00000583454 TCTE3Q8IZS6 198 aa17.94■□□□□ 0.46
TSEN54-209ENST00000583454 AAMDCQ9H7C9 122 aa17.94■□□□□ 0.46
TSEN54-209ENST00000583454 A0A0D9SG52 128 aa17.93■□□□□ 0.46
TSEN54-209ENST00000583454 CRXO43186 299 aaPredicted RBP17.93■□□□□ 0.46
TSEN54-209ENST00000583454 CDC34P49427 236 aaPredicted RBP17.93■□□□□ 0.46
TSEN54-209ENST00000583454 ICAM4Q14773 271 aa17.93■□□□□ 0.46
TSEN54-209ENST00000583454 C1orf158Q8N1D5 194 aa17.93■□□□□ 0.46
TSEN54-209ENST00000583454 LYPD1Q8N2G4 141 aa17.93■□□□□ 0.46
TSEN54-209ENST00000583454 PHYHIPLQ96FC7 376 aa17.93■□□□□ 0.46
TSEN54-209ENST00000583454 IGF2BP2-AS1Q96M15 143 aa17.93■□□□□ 0.46
TSEN54-209ENST00000583454 NEU1Q99519 415 aa17.93■□□□□ 0.46
TSEN54-209ENST00000583454 ARPC5LQ9BPX5 153 aa17.93■□□□□ 0.46
TSEN54-209ENST00000583454 HECTD4Q9Y4D8 3996 aa17.92■□□□□ 0.46
TSEN54-209ENST00000583454 IGHV4-28A0A0C4DH34 117 aa17.92■□□□□ 0.46
TSEN54-209ENST00000583454 BOLA2-SMG1P6H3BVE0 249 aa17.92■□□□□ 0.46
TSEN54-209ENST00000583454 M0R2Z0 102 aa17.92■□□□□ 0.46
TSEN54-209ENST00000583454 RBMY1A1P0DJD3 496 aaKnown RBP17.92■□□□□ 0.46
TSEN54-209ENST00000583454 RBMY1CP0DJD4 496 aa17.92■□□□□ 0.46
TSEN54-209ENST00000583454 RBMY1FQ15415 496 aaKnown RBP17.92■□□□□ 0.46
TSEN54-209ENST00000583454 SPINK13Q1W4C9 94 aa17.92■□□□□ 0.46
TSEN54-209ENST00000583454 RAB24Q969Q5 203 aa17.92■□□□□ 0.46
TSEN54-209ENST00000583454 NPIPB6E9PJ23 425 aa17.91■□□□□ 0.46
TSEN54-209ENST00000583454 STAG3L2P0CL84 134 aa17.91■□□□□ 0.46
TSEN54-209ENST00000583454 STAG3L3P0CL85 134 aa17.91■□□□□ 0.46
TSEN54-209ENST00000583454 PPP1R14DQ9NXH3 145 aa17.91■□□□□ 0.46
TSEN54-209ENST00000583454 DEFB4AO15263 64 aa17.9■□□□□ 0.46
TSEN54-209ENST00000583454 HMGB3O15347 200 aaKnown RBP17.9■□□□□ 0.46
TSEN54-209ENST00000583454 RANP62826 216 aaKnown RBP17.9■□□□□ 0.46
TSEN54-209ENST00000583454 PHLDA1Q8WV24 401 aaPredicted RBP17.9■□□□□ 0.46
TSEN54-209ENST00000583454 ACTR3CQ9C0K3 210 aaPredicted RBP17.9■□□□□ 0.46
TSEN54-209ENST00000583454 KLK5Q9Y337 293 aaPredicted RBP17.9■□□□□ 0.46
TSEN54-209ENST00000583454 GOLT1BQ9Y3E0 138 aa17.9■□□□□ 0.46
TSEN54-209ENST00000583454 SMIM9A6NGZ8 99 aa17.89■□□□□ 0.45
TSEN54-209ENST00000583454 ARL14EPLP0DKL9 152 aa17.88■□□□□ 0.45
TSEN54-209ENST00000583454 CT45A10P0DMU9 189 aa17.88■□□□□ 0.45
TSEN54-209ENST00000583454 SUN5Q8TC36 379 aa17.88■□□□□ 0.45
TSEN54-209ENST00000583454 ODF3Q96PU9 254 aa17.88■□□□□ 0.45
TSEN54-209ENST00000583454 Q9H3A6 140 aa17.88■□□□□ 0.45
TSEN54-209ENST00000583454 BCL2L11O43521 198 aa17.87■□□□□ 0.45
TSEN54-209ENST00000583454 INSP01308 110 aa17.87■□□□□ 0.45
TSEN54-209ENST00000583454 CDKN1BP46527 198 aa17.87■□□□□ 0.45
TSEN54-209ENST00000583454 TMUB2Q71RG4 321 aa17.87■□□□□ 0.45
TSEN54-209ENST00000583454 BAP18Q8IXM2 172 aa17.87■□□□□ 0.45
TSEN54-209ENST00000583454 hCG_2014768A0A024R1R8 64 aa17.86■□□□□ 0.45
TSEN54-209ENST00000583454 TRAV12-2A0A075B6T6 113 aa17.86■□□□□ 0.45
TSEN54-209ENST00000583454 IGHV3OR16-12A0A075B7B8 117 aa17.86■□□□□ 0.45
TSEN54-209ENST00000583454 KANTRA0A1W2PQU2 76 aa17.86■□□□□ 0.45
TSEN54-209ENST00000583454 TSPOP30536 169 aa17.86■□□□□ 0.45
TSEN54-209ENST00000583454 C9orf47Q6ZRZ4 202 aa17.86■□□□□ 0.45
TSEN54-209ENST00000583454 LINC00477Q96M19 166 aa17.86■□□□□ 0.45
TSEN54-209ENST00000583454 AGPAT4-IT1Q9H0P7 198 aa17.86■□□□□ 0.45
TSEN54-209ENST00000583454 OTORQ9NRC9 128 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms