RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 SPCS2Q15005 226 aa5.35□□□□□ -1.55
PPP4R1-225ENST00000583438 SPATA31B1PQ5VZV4 182 aa5.35□□□□□ -1.55
PPP4R1-225ENST00000583438 ETFRF1Q6IPR1 90 aa5.35□□□□□ -1.55
PPP4R1-225ENST00000583438 PATE2Q6UY27 113 aa5.35□□□□□ -1.55
PPP4R1-225ENST00000583438 Q6ZQT7 251 aa5.35□□□□□ -1.55
PPP4R1-225ENST00000583438 OR8A1Q8NGG7 326 aa5.35□□□□□ -1.55
PPP4R1-225ENST00000583438 UPK3BQ9BT76 320 aa5.35□□□□□ -1.55
PPP4R1-225ENST00000583438 TMEM208Q9BTX3 173 aa5.35□□□□□ -1.55
PPP4R1-225ENST00000583438 C14orf166Q9Y224 244 aaKnown RBP5.35□□□□□ -1.55
PPP4R1-225ENST00000583438 U3KQ87 197 aa5.35□□□□□ -1.55
PPP4R1-225ENST00000583438 FAT3Q8TDW7 4589 aa5.35□□□□□ -1.55
PPP4R1-225ENST00000583438 PKHD1L1Q86WI1 4243 aa5.35□□□□□ -1.55
PPP4R1-225ENST00000583438 A0A096LPF7 62 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 A0A0B4J2A0 478 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 ANKRD20A5PA0PJZ0 165 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 H3BTX0 84 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 SCGB2A1O75556 95 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 B3GALNT1O75752 331 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 NDUFB4O95168 129 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 TNFAIP8O95379 198 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 SMR3BP02814 79 aaPredicted RBP5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 HTN1P15515 57 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 ORM2P19652 201 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 AMTP48728 403 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 CCR6P51684 374 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 HIST1H1AQ02539 215 aaPredicted RBP5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 SURF2Q15527 256 aaPredicted RBP5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 GFI1BQ5VTD9 330 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 ACOT7LQ6ZUV0 252 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 ZNF738Q8NE65 137 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 RXFP4Q8TDU9 374 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 SLC35E1Q96K37 410 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 SHANK2-AS3Q9BTD1 123 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 Q9H521 79 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 SHPKQ9UHJ6 478 aa5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 MRPS16Q9Y3D3 137 aaKnown RBP5.34□□□□□ -1.55
PPP4R1-225ENST00000583438 A0A087WXM4 84 aa5.33□□□□□ -1.56
PPP4R1-225ENST00000583438 SNRPGP15A8MWD9 76 aa5.33□□□□□ -1.56
PPP4R1-225ENST00000583438 GAGE7O76087 117 aa5.33□□□□□ -1.56
PPP4R1-225ENST00000583438 GAGE12FP0CL80 117 aa5.33□□□□□ -1.56
PPP4R1-225ENST00000583438 GAGE12GP0CL81 117 aa5.33□□□□□ -1.56
PPP4R1-225ENST00000583438 GAGE12IP0CL82 117 aa5.33□□□□□ -1.56
PPP4R1-225ENST00000583438 ZNF182P17025 639 aaPredicted RBP5.33□□□□□ -1.56
PPP4R1-225ENST00000583438 AKR1C4P17516 323 aa5.33□□□□□ -1.56
PPP4R1-225ENST00000583438 CCL18P55774 89 aa5.33□□□□□ -1.56
PPP4R1-225ENST00000583438 FGL1Q08830 312 aa5.33□□□□□ -1.56
PPP4R1-225ENST00000583438 Q6ZTI0 123 aa5.33□□□□□ -1.56
PPP4R1-225ENST00000583438 OR1B1Q8NGR6 318 aa5.33□□□□□ -1.56
PPP4R1-225ENST00000583438 PPP1R14BQ96C90 147 aa5.33□□□□□ -1.56
PPP4R1-225ENST00000583438 LINC01587Q99440 93 aa5.33□□□□□ -1.56
PPP4R1-225ENST00000583438 SOSTQ9BQB4 213 aa5.33□□□□□ -1.56
PPP4R1-225ENST00000583438 A0A087X0K7 114 aa5.32□□□□□ -1.56
PPP4R1-225ENST00000583438 AKAIN1P0CW23 69 aa5.32□□□□□ -1.56
PPP4R1-225ENST00000583438 M6PRP20645 277 aa5.32□□□□□ -1.56
PPP4R1-225ENST00000583438 NUP62P37198 522 aaPredicted RBP5.32□□□□□ -1.56
PPP4R1-225ENST00000583438 GALR1P47211 349 aa5.32□□□□□ -1.56
PPP4R1-225ENST00000583438 MEOX2P50222 304 aa5.32□□□□□ -1.56
PPP4R1-225ENST00000583438 TAS2R60P59551 318 aa5.32□□□□□ -1.56
PPP4R1-225ENST00000583438 ARL16Q0P5N6 197 aa5.32□□□□□ -1.56
PPP4R1-225ENST00000583438 OR5I1Q13606 314 aa5.32□□□□□ -1.56
PPP4R1-225ENST00000583438 CLVS1Q8IUQ0 354 aaPredicted RBP5.32□□□□□ -1.56
PPP4R1-225ENST00000583438 C11orf72Q8NBR9 251 aa5.32□□□□□ -1.56
PPP4R1-225ENST00000583438 OR4D5Q8NGN0 318 aa5.32□□□□□ -1.56
PPP4R1-225ENST00000583438 OR1S1Q8NH92 325 aa5.32□□□□□ -1.56
PPP4R1-225ENST00000583438 TMEM263Q8WUH6 116 aaKnown RBP5.32□□□□□ -1.56
PPP4R1-225ENST00000583438 GNPNAT1Q96EK6 184 aaPredicted RBP5.32□□□□□ -1.56
PPP4R1-225ENST00000583438 C16orf74Q96GX8 76 aa5.32□□□□□ -1.56
PPP4R1-225ENST00000583438 TIMM8BQ9Y5J9 83 aaPredicted RBP5.32□□□□□ -1.56
PPP4R1-225ENST00000583438 DISC1C4P0D8 188 aa5.31□□□□□ -1.56
PPP4R1-225ENST00000583438 WRBO00258 174 aa5.31□□□□□ -1.56
PPP4R1-225ENST00000583438 DUSP14O95147 198 aaKnown RBP5.31□□□□□ -1.56
PPP4R1-225ENST00000583438 SCGB1D1O95968 90 aa5.31□□□□□ -1.56
PPP4R1-225ENST00000583438 CT45A10P0DMU9 189 aa5.31□□□□□ -1.56
PPP4R1-225ENST00000583438 CLINT1Q14677 625 aa5.31□□□□□ -1.56
PPP4R1-225ENST00000583438 PSG3Q16557 428 aa5.31□□□□□ -1.56
PPP4R1-225ENST00000583438 PRR9Q5T870 116 aa5.31□□□□□ -1.56
PPP4R1-225ENST00000583438 CYP2G1PQ6ZSU1 146 aa5.31□□□□□ -1.56
PPP4R1-225ENST00000583438 TMEM144Q7Z5S9 345 aa5.31□□□□□ -1.56
PPP4R1-225ENST00000583438 GPR141Q7Z602 305 aa5.31□□□□□ -1.56
PPP4R1-225ENST00000583438 ZNF331Q9NQX6 463 aaPredicted RBP5.31□□□□□ -1.56
PPP4R1-225ENST00000583438 PAIP2BQ9ULR5 123 aaKnown RBP5.31□□□□□ -1.56
PPP4R1-225ENST00000583438 A0A087WTM6 91 aa5.3□□□□□ -1.56
PPP4R1-225ENST00000583438 A0A1W2PPQ1 181 aa5.3□□□□□ -1.56
PPP4R1-225ENST00000583438 H3BQ15 152 aa5.3□□□□□ -1.56
PPP4R1-225ENST00000583438 CTDSPLO15194 276 aa5.3□□□□□ -1.56
PPP4R1-225ENST00000583438 ADAP1O75689 374 aa5.3□□□□□ -1.56
PPP4R1-225ENST00000583438 LINC00869P0C866 280 aa5.3□□□□□ -1.56
PPP4R1-225ENST00000583438 CDKN1BP46527 198 aa5.3□□□□□ -1.56
PPP4R1-225ENST00000583438 PLP1P60201 277 aa5.3□□□□□ -1.56
PPP4R1-225ENST00000583438 POLR2GP62487 172 aaKnown RBP eCLIP5.3□□□□□ -1.56
PPP4R1-225ENST00000583438 RHOBP62745 196 aa5.3□□□□□ -1.56
PPP4R1-225ENST00000583438 SSBP1Q04837 148 aaKnown RBP5.3□□□□□ -1.56
PPP4R1-225ENST00000583438 SLC38A11Q08AI6 406 aa5.3□□□□□ -1.56
PPP4R1-225ENST00000583438 PPP1R1AQ13522 171 aa5.3□□□□□ -1.56
PPP4R1-225ENST00000583438 SPANXN5Q5MJ07 72 aa5.3□□□□□ -1.56
PPP4R1-225ENST00000583438 LRTM2Q8N967 370 aa5.3□□□□□ -1.56
PPP4R1-225ENST00000583438 DYNC2LI1Q8TCX1 351 aa5.3□□□□□ -1.56
PPP4R1-225ENST00000583438 RPUSD4Q96CM3 377 aaKnown RBP5.3□□□□□ -1.56
PPP4R1-225ENST00000583438 PAM16Q9Y3D7 125 aa5.3□□□□□ -1.56
PPP4R1-225ENST00000583438 SYNGR2O43760 224 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms