RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 TRAV40A0A0B4J280 105 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 ARMS2P0C7Q2 107 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 SCGB1C2P0DMR2 95 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 ODF3Q96PU9 254 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 TNFRSF6BO95407 300 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 IFI27P40305 119 aaPredicted RBP4.6□□□□□ -1.67
RTTN-209ENST00000583043 TNFRSF18Q9Y5U5 241 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 TNRC6BQ9UPQ9 1833 aaKnown RBP4.6□□□□□ -1.67
RTTN-209ENST00000583043 IGKV2-40A0A087WW87 121 aaPredicted RBP4.6□□□□□ -1.67
RTTN-209ENST00000583043 CBY3A6NI87 242 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 IGKV2D-40P01614 121 aaPredicted RBP4.6□□□□□ -1.67
RTTN-209ENST00000583043 KLRD1Q13241 179 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 C9orf47Q6ZRZ4 202 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 Q8N7P7 452 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 ZNF503Q96F45 646 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 TPSG1Q9NRR2 321 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 ADAMTS20P59510 1910 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 GPR179Q6PRD1 2367 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 IGHV7-81A0A0B4J1V7 117 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 PSMB11A5LHX3 300 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 UBE2V1Q13404 147 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 ZC2HC1AQ96GY0 325 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 AJUBAQ96IF1 538 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 IGHV1-24A0A0C4DH33 117 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 IGLV2-8P01709 118 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 RHPN1-AS1Q9BWJ2 59 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 SPANXDQ9BXN6 97 aa4.6□□□□□ -1.67
RTTN-209ENST00000583043 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.59□□□□□ -1.67
RTTN-209ENST00000583043 IGHV7-4-1A0A0J9YVY3 117 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 CTSGP08311 255 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 ADORA2A-AS1P86434 159 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 LY6EQ16553 131 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 Q1RN00 199 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 SPRNQ5BIV9 151 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 RAB37Q96AX2 223 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 CNTFRP26992 372 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 ZNF56Q15929 161 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 C8orf86Q6ZUL3 223 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 COX8CQ7Z4L0 72 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 TMEM86BQ8N661 226 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 CFHR4Q92496 578 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 H3BUX3 64 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 LHFPL4Q7Z7J7 247 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 TRPT1Q86TN4 253 aaKnown RBP4.59□□□□□ -1.67
RTTN-209ENST00000583043 LINC00479Q96M42 142 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 ZNF747Q9BV97 191 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 C1QTNF4Q9BXJ3 329 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 ZNF407Q9C0G0 2248 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 ATG2AQ2TAZ0 1938 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 BUB3O43684 328 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 Q8N9W7 124 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 ZNF418Q8TF45 676 aaPredicted RBP4.59□□□□□ -1.67
RTTN-209ENST00000583043 SNHG12Q9BXW3 62 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 HIGD1BQ9P298 99 aa4.59□□□□□ -1.67
RTTN-209ENST00000583043 PTPRZ1P23471 2315 aaPredicted RBP4.59□□□□□ -1.68
RTTN-209ENST00000583043 M0R3E3 92 aa4.59□□□□□ -1.68
RTTN-209ENST00000583043 CIDEAO60543 219 aa4.59□□□□□ -1.68
RTTN-209ENST00000583043 TGFAP01135 160 aa4.59□□□□□ -1.68
RTTN-209ENST00000583043 PF4P02776 101 aa4.59□□□□□ -1.68
RTTN-209ENST00000583043 ZNF415Q09FC8 603 aa4.59□□□□□ -1.68
RTTN-209ENST00000583043 DIAPH2-AS1Q14236 149 aa4.59□□□□□ -1.68
RTTN-209ENST00000583043 RHOHQ15669 191 aa4.59□□□□□ -1.68
RTTN-209ENST00000583043 ZNF124Q15973 351 aa4.59□□□□□ -1.68
RTTN-209ENST00000583043 MRPL51Q4U2R6 128 aaKnown RBP4.59□□□□□ -1.68
RTTN-209ENST00000583043 PRR30Q53SZ7 412 aaPredicted RBP4.59□□□□□ -1.68
RTTN-209ENST00000583043 C11orf71Q6IPW1 123 aa4.59□□□□□ -1.68
RTTN-209ENST00000583043 SPXQ9BT56 116 aa4.59□□□□□ -1.68
RTTN-209ENST00000583043 MEGF9Q9H1U4 602 aa4.59□□□□□ -1.68
RTTN-209ENST00000583043 COX11Q9Y6N1 276 aa4.59□□□□□ -1.68
RTTN-209ENST00000583043 EML6Q6ZMW3 1958 aa4.59□□□□□ -1.68
RTTN-209ENST00000583043 TRAV12-1A0A0B4J245 112 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 SNRPCP09234 159 aaKnown RBP4.58□□□□□ -1.68
RTTN-209ENST00000583043 GNLYP22749 145 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 RNASE4P34096 147 aaKnown RBP4.58□□□□□ -1.68
RTTN-209ENST00000583043 AMMECR1LQ6DCA0 310 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 Q8N6K4 173 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 CACNA1DQ01668 2161 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 MAP1BP46821 2468 aaKnown RBP4.58□□□□□ -1.68
RTTN-209ENST00000583043 NEGR1Q7Z3B1 354 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 C10orf105Q8TEF2 133 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 CRXO43186 299 aaPredicted RBP4.58□□□□□ -1.68
RTTN-209ENST00000583043 IGF1P05019 195 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 LDLRAD2Q5SZI1 272 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 LRRC75A-AS1Q8N1F1 130 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 TMEM160Q9NX00 188 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 TRAV8-1A0A0A6YYK1 113 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 A8MWV9 139 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 TMEM238C9JI98 176 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 IGHV3-23P01764 117 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 IGHG2P01859 326 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 CRIP2P52943 208 aaPredicted RBP4.58□□□□□ -1.68
RTTN-209ENST00000583043 SUMO2P61956 95 aaKnown RBP4.58□□□□□ -1.68
RTTN-209ENST00000583043 RPL24P83731 157 aaKnown RBP4.58□□□□□ -1.68
RTTN-209ENST00000583043 SMIM2Q9BVW6 85 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 KMT2EQ8IZD2 1858 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 TRAV2A0A0B4J234 112 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 GPHB5Q86YW7 130 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 UBE2DNLQ8IWF7 75 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 ATOH7Q8N100 152 aa4.58□□□□□ -1.68
RTTN-209ENST00000583043 ZNRD1Q9P1U0 126 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms