RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 RABAC1Q9UI14 185 aa7.83□□□□□ -1.16
SS18-221ENST00000582448 LINC00527Q9UJ94 153 aa7.83□□□□□ -1.16
SS18-221ENST00000582448 DNAH9Q9NYC9 4486 aa7.82□□□□□ -1.16
SS18-221ENST00000582448 TGOLN2O43493 480 aa7.82□□□□□ -1.16
SS18-221ENST00000582448 CTSGP08311 255 aa7.82□□□□□ -1.16
SS18-221ENST00000582448 NHLRC4P0CG21 123 aaPredicted RBP7.82□□□□□ -1.16
SS18-221ENST00000582448 ATP5G3P48201 142 aa7.82□□□□□ -1.16
SS18-221ENST00000582448 EGFEM1PQ0D2K5 195 aa7.82□□□□□ -1.16
SS18-221ENST00000582448 KIAA0141Q14154 515 aaPredicted RBP7.82□□□□□ -1.16
SS18-221ENST00000582448 ZNF491Q8N8L2 437 aa7.82□□□□□ -1.16
SS18-221ENST00000582448 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.82□□□□□ -1.16
SS18-221ENST00000582448 FAM167A-AS1Q96KT0 104 aa7.82□□□□□ -1.16
SS18-221ENST00000582448 SHANK2-AS3Q9BTD1 123 aa7.82□□□□□ -1.16
SS18-221ENST00000582448 GPR61Q9BZJ8 451 aa7.82□□□□□ -1.16
SS18-221ENST00000582448 PARLQ9H300 379 aa7.82□□□□□ -1.16
SS18-221ENST00000582448 SMCO4Q9NRQ5 59 aa7.82□□□□□ -1.16
SS18-221ENST00000582448 MRPL27Q9P0M9 148 aaKnown RBP7.82□□□□□ -1.16
SS18-221ENST00000582448 YTHDF2Q9Y5A9 579 aaKnown RBP7.82□□□□□ -1.16
SS18-221ENST00000582448 C7orf77A4D0Y5 90 aa7.81□□□□□ -1.16
SS18-221ENST00000582448 C3orf84H3BNL1 204 aa7.81□□□□□ -1.16
SS18-221ENST00000582448 H3BRN7 92 aa7.81□□□□□ -1.16
SS18-221ENST00000582448 NBEAP1P0C6P0 100 aa7.81□□□□□ -1.16
SS18-221ENST00000582448 PYYP10082 97 aa7.81□□□□□ -1.16
SS18-221ENST00000582448 PPIFP30405 207 aaKnown RBP7.81□□□□□ -1.16
SS18-221ENST00000582448 ARL3P36405 182 aa7.81□□□□□ -1.16
SS18-221ENST00000582448 FAM90A2PQ658T7 463 aa7.81□□□□□ -1.16
SS18-221ENST00000582448 ATRAIDQ6UW56 229 aa7.81□□□□□ -1.16
SS18-221ENST00000582448 NOL4LQ96MY1 436 aaPredicted RBP7.81□□□□□ -1.16
SS18-221ENST00000582448 C20orf24Q9BUV8 137 aa7.81□□□□□ -1.16
SS18-221ENST00000582448 NDUFB4O95168 129 aa7.8□□□□□ -1.16
SS18-221ENST00000582448 MT-ND4LP03901 98 aa7.8□□□□□ -1.16
SS18-221ENST00000582448 HIST1H1EP10412 219 aaKnown RBP7.8□□□□□ -1.16
SS18-221ENST00000582448 RPL7P18124 248 aaKnown RBP7.8□□□□□ -1.16
SS18-221ENST00000582448 ADIRFQ15847 76 aa7.8□□□□□ -1.16
SS18-221ENST00000582448 MORN5Q5VZ52 161 aa7.8□□□□□ -1.16
SS18-221ENST00000582448 KRTAP5-3Q6L8H2 238 aa7.8□□□□□ -1.16
SS18-221ENST00000582448 TEX38Q6PEX7 206 aa7.8□□□□□ -1.16
SS18-221ENST00000582448 ZNF329Q86UD4 541 aa7.8□□□□□ -1.16
SS18-221ENST00000582448 CMTM2Q8TAZ6 248 aa7.8□□□□□ -1.16
SS18-221ENST00000582448 NTN5Q8WTR8 489 aaPredicted RBP7.8□□□□□ -1.16
SS18-221ENST00000582448 BLNKQ8WV28 456 aa7.8□□□□□ -1.16
SS18-221ENST00000582448 FXYD5Q96DB9 178 aa7.8□□□□□ -1.16
SS18-221ENST00000582448 GPR82Q96P67 336 aa7.8□□□□□ -1.16
SS18-221ENST00000582448 METTL26Q96S19 204 aa7.8□□□□□ -1.16
SS18-221ENST00000582448 CHRDL1Q9BU40 450 aa7.8□□□□□ -1.16
SS18-221ENST00000582448 COL7A1Q02388 2944 aa7.79□□□□□ -1.16
SS18-221ENST00000582448 A0A087WWC5 75 aa7.79□□□□□ -1.16
SS18-221ENST00000582448 HELTA6NFD8 242 aa7.79□□□□□ -1.16
SS18-221ENST00000582448 ZNF98A6NK75 572 aa7.79□□□□□ -1.16
SS18-221ENST00000582448 IGHG4P01861 327 aa7.79□□□□□ -1.16
SS18-221ENST00000582448 GP9P14770 177 aa7.79□□□□□ -1.16
SS18-221ENST00000582448 AKR1C3P42330 323 aa7.79□□□□□ -1.16
SS18-221ENST00000582448 CNN1P51911 297 aaKnown RBP7.79□□□□□ -1.16
SS18-221ENST00000582448 RANP62826 216 aaKnown RBP7.79□□□□□ -1.16
SS18-221ENST00000582448 USF2Q15853 346 aaPredicted RBP7.79□□□□□ -1.16
SS18-221ENST00000582448 LEMD1Q68G75 181 aa7.79□□□□□ -1.16
SS18-221ENST00000582448 TOMM20LQ6UXN7 152 aa7.79□□□□□ -1.16
SS18-221ENST00000582448 C18orf65Q6ZTR6 163 aa7.79□□□□□ -1.16
SS18-221ENST00000582448 OR8I2Q8N0Y5 310 aa7.79□□□□□ -1.16
SS18-221ENST00000582448 HIST1H2BAQ96A08 127 aa7.79□□□□□ -1.16
SS18-221ENST00000582448 C11orf52Q96A22 123 aa7.79□□□□□ -1.16
SS18-221ENST00000582448 DUX3Q96PT4 197 aa7.79□□□□□ -1.16
SS18-221ENST00000582448 PRR25Q96S07 402 aa7.79□□□□□ -1.16
SS18-221ENST00000582448 MCRIP2Q9BUT9 160 aaKnown RBP7.79□□□□□ -1.16
SS18-221ENST00000582448 CTDSP1Q9GZU7 261 aa7.79□□□□□ -1.16
SS18-221ENST00000582448 SDF2L1Q9HCN8 221 aa7.79□□□□□ -1.16
SS18-221ENST00000582448 CXorf65A6NEN9 183 aa7.78□□□□□ -1.16
SS18-221ENST00000582448 K7EQM0 130 aa7.78□□□□□ -1.16
SS18-221ENST00000582448 TSPAN4O14817 238 aa7.78□□□□□ -1.16
SS18-221ENST00000582448 SLC25A5P05141 298 aaKnown RBP7.78□□□□□ -1.16
SS18-221ENST00000582448 S100A9P06702 114 aaKnown RBP7.78□□□□□ -1.16
SS18-221ENST00000582448 NPPCP23582 126 aa7.78□□□□□ -1.16
SS18-221ENST00000582448 CRYBB3P26998 211 aa7.78□□□□□ -1.16
SS18-221ENST00000582448 GNG4P50150 75 aa7.78□□□□□ -1.16
SS18-221ENST00000582448 UBE2G1P62253 170 aa7.78□□□□□ -1.16
SS18-221ENST00000582448 TMEM88Q6PEY1 159 aa7.78□□□□□ -1.16
SS18-221ENST00000582448 LYPD1Q8N2G4 141 aa7.78□□□□□ -1.16
SS18-221ENST00000582448 GRAMD2BQ96HH9 432 aa7.78□□□□□ -1.16
SS18-221ENST00000582448 AAMDCQ9H7C9 122 aa7.78□□□□□ -1.16
SS18-221ENST00000582448 ZMAT5Q9UDW3 170 aaKnown RBP7.78□□□□□ -1.16
SS18-221ENST00000582448 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.77□□□□□ -1.17
SS18-221ENST00000582448 PGPA6NDG6 321 aa7.77□□□□□ -1.17
SS18-221ENST00000582448 GGTLC3B5MD39 225 aa7.77□□□□□ -1.17
SS18-221ENST00000582448 C9JCJ5 164 aa7.77□□□□□ -1.17
SS18-221ENST00000582448 DNASE2O00115 360 aaPredicted RBP7.77□□□□□ -1.17
SS18-221ENST00000582448 NDUFA4O00483 81 aa7.77□□□□□ -1.17
SS18-221ENST00000582448 PPP1R2P9O14990 202 aa7.77□□□□□ -1.17
SS18-221ENST00000582448 GGCTO75223 188 aaKnown RBP7.77□□□□□ -1.17
SS18-221ENST00000582448 IGHV3-11P01762 117 aa7.77□□□□□ -1.17
SS18-221ENST00000582448 S100PP25815 95 aa7.77□□□□□ -1.17
SS18-221ENST00000582448 RPL35P42766 123 aaKnown RBP7.77□□□□□ -1.17
SS18-221ENST00000582448 GALR1P47211 349 aa7.77□□□□□ -1.17
SS18-221ENST00000582448 MEOX2P50222 304 aa7.77□□□□□ -1.17
SS18-221ENST00000582448 PSG9Q00887 426 aa7.77□□□□□ -1.17
SS18-221ENST00000582448 CFHR3Q02985 330 aa7.77□□□□□ -1.17
SS18-221ENST00000582448 PDE6HQ13956 83 aa7.77□□□□□ -1.17
SS18-221ENST00000582448 C1orf194Q5T5A4 169 aa7.77□□□□□ -1.17
SS18-221ENST00000582448 CBLN2Q8IUK8 224 aa7.77□□□□□ -1.17
SS18-221ENST00000582448 C15orf54Q8N8G6 183 aa7.77□□□□□ -1.17
SS18-221ENST00000582448 C5orf17Q8NAS9 161 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms