RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 DKK2Q9UBU2 259 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 PUS1Q9Y606 427 aaKnown RBP eCLIP5.39□□□□□ -1.55
CCDC47-205ENST00000582331 DMBT1Q9UGM3 2413 aaPredicted RBP5.39□□□□□ -1.55
CCDC47-205ENST00000582331 NACAE9PAV3 2078 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 AGRNO00468 2067 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 SPCS3P61009 180 aa5.38□□□□□ -1.55
CCDC47-205ENST00000582331 HBG1P69891 147 aa5.38□□□□□ -1.55
CCDC47-205ENST00000582331 HBG2P69892 147 aa5.38□□□□□ -1.55
CCDC47-205ENST00000582331 CCL20P78556 96 aa5.38□□□□□ -1.55
CCDC47-205ENST00000582331 SLC38A11Q08AI6 406 aa5.38□□□□□ -1.55
CCDC47-205ENST00000582331 ATP6V1FQ16864 119 aa5.38□□□□□ -1.55
CCDC47-205ENST00000582331 VWC2Q2TAL6 325 aa5.38□□□□□ -1.55
CCDC47-205ENST00000582331 FAM222AQ5U5X8 452 aa5.38□□□□□ -1.55
CCDC47-205ENST00000582331 ZNF705AQ6ZN79 300 aaPredicted RBP5.38□□□□□ -1.55
CCDC47-205ENST00000582331 ZNF600Q6ZNG1 722 aa5.38□□□□□ -1.55
CCDC47-205ENST00000582331 C15orf53Q8NAA6 179 aa5.38□□□□□ -1.55
CCDC47-205ENST00000582331 FAM213BQ8TBF2 198 aa5.38□□□□□ -1.55
CCDC47-205ENST00000582331 DCANP1Q8TF63 244 aa5.38□□□□□ -1.55
CCDC47-205ENST00000582331 PINX1Q96BK5 328 aaKnown RBP5.38□□□□□ -1.55
CCDC47-205ENST00000582331 NARS2Q96I59 477 aaKnown RBP5.38□□□□□ -1.55
CCDC47-205ENST00000582331 CIB3Q96Q77 187 aaPredicted RBP5.38□□□□□ -1.55
CCDC47-205ENST00000582331 PSMG3Q9BT73 122 aaPredicted RBP5.38□□□□□ -1.55
CCDC47-205ENST00000582331 SEC11CQ9BY50 192 aa5.38□□□□□ -1.55
CCDC47-205ENST00000582331 WDR61Q9GZS3 305 aaKnown RBP5.38□□□□□ -1.55
CCDC47-205ENST00000582331 FKBP11Q9NYL4 201 aa5.38□□□□□ -1.55
CCDC47-205ENST00000582331 IGHV3OR16-12A0A075B7B8 117 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 TRAV1-1A0A0B4J248 108 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 HELTA6NFD8 242 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 CEBPZOSA8MTT3 80 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 ZNF705FA8MVS1 300 aaPredicted RBP5.37□□□□□ -1.55
CCDC47-205ENST00000582331 F8W036 122 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 ZNF705DP0CH99 300 aaPredicted RBP5.37□□□□□ -1.55
CCDC47-205ENST00000582331 ZNF705BP0CI00 300 aaPredicted RBP5.37□□□□□ -1.55
CCDC47-205ENST00000582331 NPBWR1P48145 328 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 BTN1A1Q13410 526 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 GUK1Q16774 197 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 SPINK9Q5DT21 86 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 PSMG4Q5JS54 123 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 AKR1C8PQ5T2L2 129 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 DPPA3Q6W0C5 159 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 ZNRF2Q8NHG8 242 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 SUN5Q8TC36 379 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 SCGB1C1Q8TD33 95 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 TMEM170AQ8WVE7 144 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 MBD3L1Q8WWY6 194 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 METTL26Q96S19 204 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 RSG1Q9BU20 258 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 TMEM147Q9BVK8 224 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 RPRMQ9NS64 109 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 PRNDQ9UKY0 176 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 TIMM9Q9Y5J7 89 aa5.37□□□□□ -1.55
CCDC47-205ENST00000582331 FAM74A7A6NL05 159 aa5.36□□□□□ -1.55
CCDC47-205ENST00000582331 PRSS46E5RG02 174 aa5.36□□□□□ -1.55
CCDC47-205ENST00000582331 H3BMM0 161 aa5.36□□□□□ -1.55
CCDC47-205ENST00000582331 SFTA3P0C7M3 94 aa5.36□□□□□ -1.55
CCDC47-205ENST00000582331 CRYBB3P26998 211 aa5.36□□□□□ -1.55
CCDC47-205ENST00000582331 KRTAP10-2P60368 255 aa5.36□□□□□ -1.55
CCDC47-205ENST00000582331 HSPE1P61604 102 aaKnown RBP5.36□□□□□ -1.55
CCDC47-205ENST00000582331 SERF2P84101 59 aa5.36□□□□□ -1.55
CCDC47-205ENST00000582331 PEA15Q15121 130 aa5.36□□□□□ -1.55
CCDC47-205ENST00000582331 ZNF726P1Q15940 193 aa5.36□□□□□ -1.55
CCDC47-205ENST00000582331 FAM74A3Q4VXF1 159 aa5.36□□□□□ -1.55
CCDC47-205ENST00000582331 OR8G2PQ6IF36 304 aa5.36□□□□□ -1.55
CCDC47-205ENST00000582331 OR10P1Q8NGE3 313 aa5.36□□□□□ -1.55
CCDC47-205ENST00000582331 OR4A16Q8NH70 328 aa5.36□□□□□ -1.55
CCDC47-205ENST00000582331 UBE2L5PA0A1B0GUS4 154 aa5.35□□□□□ -1.55
CCDC47-205ENST00000582331 RBFOX3A6NFN3 312 aa5.35□□□□□ -1.55
CCDC47-205ENST00000582331 HBE1P02100 147 aa5.35□□□□□ -1.55
CCDC47-205ENST00000582331 CCL18P55774 89 aa5.35□□□□□ -1.55
CCDC47-205ENST00000582331 DAD1P61803 113 aa5.35□□□□□ -1.55
CCDC47-205ENST00000582331 SNRPD3P62318 126 aaKnown RBP5.35□□□□□ -1.55
CCDC47-205ENST00000582331 ERHP84090 104 aaKnown RBP5.35□□□□□ -1.55
CCDC47-205ENST00000582331 ZNF506Q5JVG8 444 aa5.35□□□□□ -1.55
CCDC47-205ENST00000582331 Q5VSD8 79 aa5.35□□□□□ -1.55
CCDC47-205ENST00000582331 SSX7Q7RTT5 188 aa5.35□□□□□ -1.55
CCDC47-205ENST00000582331 LYPD1Q8N2G4 141 aa5.35□□□□□ -1.55
CCDC47-205ENST00000582331 SVBPQ8N300 66 aa5.35□□□□□ -1.55
CCDC47-205ENST00000582331 ZNF114Q8NC26 417 aa5.35□□□□□ -1.55
CCDC47-205ENST00000582331 FRZBQ92765 325 aa5.35□□□□□ -1.55
CCDC47-205ENST00000582331 C18orf15Q96N68 181 aa5.35□□□□□ -1.55
CCDC47-205ENST00000582331 PBDC1Q9BVG4 233 aa5.35□□□□□ -1.55
CCDC47-205ENST00000582331 NKX6-2Q9C056 277 aaPredicted RBP5.35□□□□□ -1.55
CCDC47-205ENST00000582331 SMDT1Q9H4I9 107 aa5.35□□□□□ -1.55
CCDC47-205ENST00000582331 WDR83OSQ9Y284 106 aa5.35□□□□□ -1.55
CCDC47-205ENST00000582331 TMA7Q9Y2S6 64 aaKnown RBP5.35□□□□□ -1.55
CCDC47-205ENST00000582331 FAT1Q14517 4588 aa5.35□□□□□ -1.55
CCDC47-205ENST00000582331 MYCBP2O75592 4640 aa5.35□□□□□ -1.55
CCDC47-205ENST00000582331 LOC102723971A0A1B0GUV8 181 aa5.34□□□□□ -1.55
CCDC47-205ENST00000582331 A0A1B0GV50 99 aa5.34□□□□□ -1.55
CCDC47-205ENST00000582331 KRTAP9-7A8MTY7 169 aa5.34□□□□□ -1.55
CCDC47-205ENST00000582331 SNAPINO95295 136 aa5.34□□□□□ -1.55
CCDC47-205ENST00000582331 SRP19P09132 144 aaKnown RBP5.34□□□□□ -1.55
CCDC47-205ENST00000582331 HLA-DRB4P13762 266 aa5.34□□□□□ -1.55
CCDC47-205ENST00000582331 BTF3P20290 206 aaKnown RBP5.34□□□□□ -1.55
CCDC47-205ENST00000582331 HOXA1P49639 335 aaPredicted RBP5.34□□□□□ -1.55
CCDC47-205ENST00000582331 PPT1P50897 306 aa5.34□□□□□ -1.55
CCDC47-205ENST00000582331 FXYD7P58549 80 aa5.34□□□□□ -1.55
CCDC47-205ENST00000582331 RAB2AP61019 212 aa5.34□□□□□ -1.55
CCDC47-205ENST00000582331 DLK1P80370 383 aa5.34□□□□□ -1.55
CCDC47-205ENST00000582331 ICAM4Q14773 271 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms