RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 CLLU1Q5K131 121 aa7.08□□□□□ -1.28
RFFL-210ENST00000582308 CST9LP1Q5W188 147 aa7.08□□□□□ -1.28
RFFL-210ENST00000582308 APRG1Q8IVJ8 170 aa7.08□□□□□ -1.28
RFFL-210ENST00000582308 ZNF738Q8NE65 137 aa7.08□□□□□ -1.28
RFFL-210ENST00000582308 FAM110AQ9BQ89 295 aa7.08□□□□□ -1.28
RFFL-210ENST00000582308 WFDC10AQ9H1F0 79 aa7.08□□□□□ -1.28
RFFL-210ENST00000582308 AAMDCQ9H7C9 122 aa7.08□□□□□ -1.28
RFFL-210ENST00000582308 MANBALQ9NQG1 85 aa7.08□□□□□ -1.28
RFFL-210ENST00000582308 CLEC5AQ9NY25 188 aa7.08□□□□□ -1.28
RFFL-210ENST00000582308 PRELID1Q9Y255 219 aa7.08□□□□□ -1.28
RFFL-210ENST00000582308 ARL2-SNX15V9GYD0 113 aa7.08□□□□□ -1.28
RFFL-210ENST00000582308 OR11H12B2RN74 326 aa7.07□□□□□ -1.28
RFFL-210ENST00000582308 F6UB75 175 aa7.07□□□□□ -1.28
RFFL-210ENST00000582308 SLC25A5P05141 298 aaKnown RBP7.07□□□□□ -1.28
RFFL-210ENST00000582308 CMC4P56277 68 aaPredicted RBP7.07□□□□□ -1.28
RFFL-210ENST00000582308 GDF5OSQ5U4N7 250 aa7.07□□□□□ -1.28
RFFL-210ENST00000582308 GTSCR1Q86UQ5 136 aa7.07□□□□□ -1.28
RFFL-210ENST00000582308 CCDC28AQ8IWP9 274 aa7.07□□□□□ -1.28
RFFL-210ENST00000582308 RPUSD4Q96CM3 377 aaKnown RBP7.07□□□□□ -1.28
RFFL-210ENST00000582308 MRPL53Q96EL3 112 aaKnown RBP7.07□□□□□ -1.28
RFFL-210ENST00000582308 RARRES2Q99969 163 aa7.07□□□□□ -1.28
RFFL-210ENST00000582308 ZMAT5Q9UDW3 170 aaKnown RBP7.07□□□□□ -1.28
RFFL-210ENST00000582308 LOC102723971A0A1B0GUV8 181 aa7.06□□□□□ -1.28
RFFL-210ENST00000582308 RBFOX3A6NFN3 312 aa7.06□□□□□ -1.28
RFFL-210ENST00000582308 KNCNA6PVL3 124 aa7.06□□□□□ -1.28
RFFL-210ENST00000582308 C11orf94C9JXX5 98 aa7.06□□□□□ -1.28
RFFL-210ENST00000582308 IFNA1P01562 189 aa7.06□□□□□ -1.28
RFFL-210ENST00000582308 ZNF705DP0CH99 300 aaPredicted RBP7.06□□□□□ -1.28
RFFL-210ENST00000582308 ZNF705BP0CI00 300 aaPredicted RBP7.06□□□□□ -1.28
RFFL-210ENST00000582308 BCL2P10415 239 aa7.06□□□□□ -1.28
RFFL-210ENST00000582308 GNG5P63218 68 aa7.06□□□□□ -1.28
RFFL-210ENST00000582308 DEFB125Q8N687 156 aa7.06□□□□□ -1.28
RFFL-210ENST00000582308 ARL6IP6Q8N6S5 226 aa7.06□□□□□ -1.28
RFFL-210ENST00000582308 C5orf17Q8NAS9 161 aa7.06□□□□□ -1.28
RFFL-210ENST00000582308 CITED4Q96RK1 184 aa7.06□□□□□ -1.28
RFFL-210ENST00000582308 NKX6-2Q9C056 277 aaPredicted RBP7.06□□□□□ -1.28
RFFL-210ENST00000582308 VAX2Q9UIW0 290 aa7.06□□□□□ -1.28
RFFL-210ENST00000582308 EPDR1Q9UM22 224 aa7.06□□□□□ -1.28
RFFL-210ENST00000582308 IGKV2-40A0A087WW87 121 aaPredicted RBP7.05□□□□□ -1.28
RFFL-210ENST00000582308 A0A0J9YX75 114 aa7.05□□□□□ -1.28
RFFL-210ENST00000582308 DIRC3C9JPN6 131 aa7.05□□□□□ -1.28
RFFL-210ENST00000582308 IGKV2D-40P01614 121 aaPredicted RBP7.05□□□□□ -1.28
RFFL-210ENST00000582308 PRB2P02812 416 aaPredicted RBP7.05□□□□□ -1.28
RFFL-210ENST00000582308 CSN1S1P47710 185 aa7.05□□□□□ -1.28
RFFL-210ENST00000582308 MEF2BQ02080 365 aaPredicted RBP7.05□□□□□ -1.28
RFFL-210ENST00000582308 TOR2AQ5JU69 321 aa7.05□□□□□ -1.28
RFFL-210ENST00000582308 ZNF506Q5JVG8 444 aa7.05□□□□□ -1.28
RFFL-210ENST00000582308 ACTL10Q5JWF8 245 aa7.05□□□□□ -1.28
RFFL-210ENST00000582308 FOXI2Q6ZQN5 318 aa7.05□□□□□ -1.28
RFFL-210ENST00000582308 OR8A1Q8NGG7 326 aa7.05□□□□□ -1.28
RFFL-210ENST00000582308 CMTM2Q8TAZ6 248 aa7.05□□□□□ -1.28
RFFL-210ENST00000582308 RXFP4Q8TDU9 374 aa7.05□□□□□ -1.28
RFFL-210ENST00000582308 FAM210AQ96ND0 272 aa7.05□□□□□ -1.28
RFFL-210ENST00000582308 SAV1Q9H4B6 383 aaPredicted RBP7.05□□□□□ -1.28
RFFL-210ENST00000582308 RPH3ALQ9UNE2 315 aa7.05□□□□□ -1.28
RFFL-210ENST00000582308 SCO2A0A1W2PP80 73 aa7.04□□□□□ -1.28
RFFL-210ENST00000582308 H3BMM0 161 aa7.04□□□□□ -1.28
RFFL-210ENST00000582308 PEX7O00628 323 aa7.04□□□□□ -1.28
RFFL-210ENST00000582308 TCRAP04437 139 aa7.04□□□□□ -1.28
RFFL-210ENST00000582308 HLA-DRB4P13762 266 aa7.04□□□□□ -1.28
RFFL-210ENST00000582308 TAGLN2P37802 199 aaKnown RBP7.04□□□□□ -1.28
RFFL-210ENST00000582308 SRSF3P84103 164 aaKnown RBP7.04□□□□□ -1.28
RFFL-210ENST00000582308 ERCC8Q13216 396 aa7.04□□□□□ -1.28
RFFL-210ENST00000582308 EBLN2Q6P2I7 272 aa7.04□□□□□ -1.28
RFFL-210ENST00000582308 GOLT1AQ6ZVE7 132 aa7.04□□□□□ -1.28
RFFL-210ENST00000582308 LINC00479Q96M42 142 aa7.04□□□□□ -1.28
RFFL-210ENST00000582308 VGLL1Q99990 258 aa7.04□□□□□ -1.28
RFFL-210ENST00000582308 EIF5A2Q9GZV4 153 aaKnown RBP7.04□□□□□ -1.28
RFFL-210ENST00000582308 AGPAT4-IT1Q9H0P7 198 aa7.04□□□□□ -1.28
RFFL-210ENST00000582308 AURKAIP1Q9NWT8 199 aaPredicted RBP7.04□□□□□ -1.28
RFFL-210ENST00000582308 HLA-DRB4X5D2U9 266 aa7.04□□□□□ -1.28
RFFL-210ENST00000582308 TRAV8-1A0A0A6YYK1 113 aa7.03□□□□□ -1.28
RFFL-210ENST00000582308 RBMY1BA6NDE4 496 aaKnown RBP7.03□□□□□ -1.28
RFFL-210ENST00000582308 RBMY1EA6NEQ0 496 aaKnown RBP7.03□□□□□ -1.28
RFFL-210ENST00000582308 A8MTW9 85 aa7.03□□□□□ -1.28
RFFL-210ENST00000582308 C9JQL5 133 aa7.03□□□□□ -1.28
RFFL-210ENST00000582308 NPIPB6E9PJ23 425 aa7.03□□□□□ -1.28
RFFL-210ENST00000582308 RBMY1DP0C7P1 496 aaKnown RBP7.03□□□□□ -1.28
RFFL-210ENST00000582308 CT45A10P0DMU9 189 aa7.03□□□□□ -1.28
RFFL-210ENST00000582308 CNN1P51911 297 aaKnown RBP7.03□□□□□ -1.28
RFFL-210ENST00000582308 HIST1H1AQ02539 215 aaPredicted RBP7.03□□□□□ -1.28
RFFL-210ENST00000582308 C9orf47Q6ZRZ4 202 aa7.03□□□□□ -1.28
RFFL-210ENST00000582308 CYB561D1Q8N8Q1 229 aa7.03□□□□□ -1.28
RFFL-210ENST00000582308 OR10J6PQ8NGY7 276 aa7.03□□□□□ -1.28
RFFL-210ENST00000582308 C2CD4CQ8TF44 421 aa7.03□□□□□ -1.28
RFFL-210ENST00000582308 HIST1H2BAQ96A08 127 aa7.03□□□□□ -1.28
RFFL-210ENST00000582308 C11orf52Q96A22 123 aa7.03□□□□□ -1.28
RFFL-210ENST00000582308 TXNDC17Q9BRA2 123 aa7.03□□□□□ -1.28
RFFL-210ENST00000582308 TCEAL7Q9BRU2 100 aa7.03□□□□□ -1.28
RFFL-210ENST00000582308 ATG101Q9BSB4 218 aa7.03□□□□□ -1.28
RFFL-210ENST00000582308 SRD5A3Q9H8P0 318 aa7.03□□□□□ -1.28
RFFL-210ENST00000582308 NBEAL2Q6ZNJ1 2754 aa7.02□□□□□ -1.29
RFFL-210ENST00000582308 TRAV34A0A0B4J273 112 aa7.02□□□□□ -1.29
RFFL-210ENST00000582308 RBAKDNA6NC62 111 aa7.02□□□□□ -1.29
RFFL-210ENST00000582308 LINC00862A6NCI5 91 aa7.02□□□□□ -1.29
RFFL-210ENST00000582308 F6UZH7 168 aa7.02□□□□□ -1.29
RFFL-210ENST00000582308 K7EIL1 84 aa7.02□□□□□ -1.29
RFFL-210ENST00000582308 PDE6DO43924 150 aa7.02□□□□□ -1.29
RFFL-210ENST00000582308 DUSP14O95147 198 aaKnown RBP7.02□□□□□ -1.29
RFFL-210ENST00000582308 IGKV3-20P01619 116 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms