RNA–Protein interactions for RNA: ENST00000581709.1

RTTN-208, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-208ENST00000581709 SLC17A3O00476 420 aa6.57□□□□□ -1.36
RTTN-208ENST00000581709 NDUFB4O95168 129 aa6.57□□□□□ -1.36
RTTN-208ENST00000581709 IGKV3-20P01619 116 aa6.57□□□□□ -1.36
RTTN-208ENST00000581709 STAG3L2P0CL84 134 aa6.57□□□□□ -1.36
RTTN-208ENST00000581709 STAG3L3P0CL85 134 aa6.57□□□□□ -1.36
RTTN-208ENST00000581709 ARL14EPLP0DKL9 152 aa6.57□□□□□ -1.36
RTTN-208ENST00000581709 HLA-DMBP28068 263 aa6.57□□□□□ -1.36
RTTN-208ENST00000581709 CSN1S1P47710 185 aa6.57□□□□□ -1.36
RTTN-208ENST00000581709 RAB5CP51148 216 aa6.57□□□□□ -1.36
RTTN-208ENST00000581709 FAM74A1Q5RGS3 127 aa6.57□□□□□ -1.36
RTTN-208ENST00000581709 GDF5OSQ5U4N7 250 aa6.57□□□□□ -1.36
RTTN-208ENST00000581709 DPPA3Q6W0C5 159 aa6.57□□□□□ -1.36
RTTN-208ENST00000581709 C9orf62Q8N4C0 152 aa6.57□□□□□ -1.36
RTTN-208ENST00000581709 OR8A1Q8NGG7 326 aa6.57□□□□□ -1.36
RTTN-208ENST00000581709 MRPL53Q96EL3 112 aaKnown RBP6.57□□□□□ -1.36
RTTN-208ENST00000581709 ZNF503Q96F45 646 aa6.57□□□□□ -1.36
RTTN-208ENST00000581709 TM2D3Q9BRN9 247 aa6.57□□□□□ -1.36
RTTN-208ENST00000581709 C1QTNF4Q9BXJ3 329 aa6.57□□□□□ -1.36
RTTN-208ENST00000581709 TMEM167BQ9NRX6 74 aa6.57□□□□□ -1.36
RTTN-208ENST00000581709 PGPEP1Q9NXJ5 209 aa6.57□□□□□ -1.36
RTTN-208ENST00000581709 A6NJY4 79 aa6.56□□□□□ -1.36
RTTN-208ENST00000581709 SPRY2O43597 315 aa6.56□□□□□ -1.36
RTTN-208ENST00000581709 EIF3GO75821 320 aaKnown RBP eCLIP6.56□□□□□ -1.36
RTTN-208ENST00000581709 CA1P00915 261 aaPredicted RBP6.56□□□□□ -1.36
RTTN-208ENST00000581709 GCHFRP30047 84 aa6.56□□□□□ -1.36
RTTN-208ENST00000581709 CNN1P51911 297 aaKnown RBP6.56□□□□□ -1.36
RTTN-208ENST00000581709 DEFB1P60022 68 aa6.56□□□□□ -1.36
RTTN-208ENST00000581709 HIST1H1AQ02539 215 aaPredicted RBP6.56□□□□□ -1.36
RTTN-208ENST00000581709 ICAM4Q14773 271 aa6.56□□□□□ -1.36
RTTN-208ENST00000581709 IQCF2Q8IXL9 164 aa6.56□□□□□ -1.36
RTTN-208ENST00000581709 EXOC3-AS1Q8N2X6 119 aa6.56□□□□□ -1.36
RTTN-208ENST00000581709 RXFP4Q8TDU9 374 aa6.56□□□□□ -1.36
RTTN-208ENST00000581709 TMED6Q8WW62 240 aa6.56□□□□□ -1.36
RTTN-208ENST00000581709 RCHY1Q96PM5 261 aa6.56□□□□□ -1.36
RTTN-208ENST00000581709 PGPA6NDG6 321 aa6.55□□□□□ -1.36
RTTN-208ENST00000581709 ZNF705DP0CH99 300 aaPredicted RBP6.55□□□□□ -1.36
RTTN-208ENST00000581709 ZNF705BP0CI00 300 aaPredicted RBP6.55□□□□□ -1.36
RTTN-208ENST00000581709 NKX2-5P52952 324 aaPredicted RBP6.55□□□□□ -1.36
RTTN-208ENST00000581709 ZNF726P1Q15940 193 aa6.55□□□□□ -1.36
RTTN-208ENST00000581709 CMTM2Q8TAZ6 248 aa6.55□□□□□ -1.36
RTTN-208ENST00000581709 FAM213BQ8TBF2 198 aa6.55□□□□□ -1.36
RTTN-208ENST00000581709 SFT2D1Q8WV19 159 aa6.55□□□□□ -1.36
RTTN-208ENST00000581709 RNF183Q96D59 192 aa6.55□□□□□ -1.36
RTTN-208ENST00000581709 Q9H3A6 140 aa6.55□□□□□ -1.36
RTTN-208ENST00000581709 OTORQ9NRC9 128 aa6.55□□□□□ -1.36
RTTN-208ENST00000581709 TP53TG1Q9Y2A0 90 aa6.55□□□□□ -1.36
RTTN-208ENST00000581709 U3KQK5 164 aa6.55□□□□□ -1.36
RTTN-208ENST00000581709 MAP1LC3B2A6NCE7 125 aa6.54□□□□□ -1.36
RTTN-208ENST00000581709 PRAC2D3DTV9 90 aa6.54□□□□□ -1.36
RTTN-208ENST00000581709 TEX46H3BTG2 121 aa6.54□□□□□ -1.36
RTTN-208ENST00000581709 M0R3E3 92 aa6.54□□□□□ -1.36
RTTN-208ENST00000581709 AMBPP02760 352 aa6.54□□□□□ -1.36
RTTN-208ENST00000581709 H2AFB1P0C5Y9 115 aa6.54□□□□□ -1.36
RTTN-208ENST00000581709 TSPOP30536 169 aa6.54□□□□□ -1.36
RTTN-208ENST00000581709 FHITP49789 147 aa6.54□□□□□ -1.36
RTTN-208ENST00000581709 DEFB135Q30KP9 77 aa6.54□□□□□ -1.36
RTTN-208ENST00000581709 ARL6IP6Q8N6S5 226 aa6.54□□□□□ -1.36
RTTN-208ENST00000581709 SUN5Q8TC36 379 aa6.54□□□□□ -1.36
RTTN-208ENST00000581709 MBD3L1Q8WWY6 194 aa6.54□□□□□ -1.36
RTTN-208ENST00000581709 PHYHIPLQ96FC7 376 aa6.54□□□□□ -1.36
RTTN-208ENST00000581709 LINC00477Q96M19 166 aa6.54□□□□□ -1.36
RTTN-208ENST00000581709 OVOL2Q9BRP0 275 aa6.54□□□□□ -1.36
RTTN-208ENST00000581709 NKX6-2Q9C056 277 aaPredicted RBP6.54□□□□□ -1.36
RTTN-208ENST00000581709 MAP1LC3BQ9GZQ8 125 aa6.54□□□□□ -1.36
RTTN-208ENST00000581709 PLA2G2EQ9NZK7 142 aa6.54□□□□□ -1.36
RTTN-208ENST00000581709 XCL2Q9UBD3 114 aa6.54□□□□□ -1.36
RTTN-208ENST00000581709 A0A1W2PRE2 83 aa6.53□□□□□ -1.36
RTTN-208ENST00000581709 GIG44P09565 113 aaPredicted RBP6.53□□□□□ -1.36
RTTN-208ENST00000581709 FGF8P55075 233 aaPredicted RBP6.53□□□□□ -1.36
RTTN-208ENST00000581709 FXYD7P58549 80 aa6.53□□□□□ -1.36
RTTN-208ENST00000581709 SUMO1P63165 101 aaKnown RBP6.53□□□□□ -1.36
RTTN-208ENST00000581709 TMEM78Q5T7P6 136 aa6.53□□□□□ -1.36
RTTN-208ENST00000581709 SSX7Q7RTT5 188 aa6.53□□□□□ -1.36
RTTN-208ENST00000581709 RARRES2Q99969 163 aa6.53□□□□□ -1.36
RTTN-208ENST00000581709 SLC35B3Q9H1N7 401 aa6.53□□□□□ -1.36
RTTN-208ENST00000581709 RBAKDNA6NC62 111 aa6.52□□□□□ -1.37
RTTN-208ENST00000581709 A8MTW9 85 aa6.52□□□□□ -1.37
RTTN-208ENST00000581709 DIRC3C9JPN6 131 aa6.52□□□□□ -1.37
RTTN-208ENST00000581709 NPIPB6E9PJ23 425 aa6.52□□□□□ -1.37
RTTN-208ENST00000581709 K7EQM0 130 aa6.52□□□□□ -1.37
RTTN-208ENST00000581709 SLC25A5P05141 298 aaKnown RBP6.52□□□□□ -1.37
RTTN-208ENST00000581709 PRB4P10163 310 aaPredicted RBP6.52□□□□□ -1.37
RTTN-208ENST00000581709 LEPP41159 167 aa6.52□□□□□ -1.37
RTTN-208ENST00000581709 SULT1A2P50226 295 aa6.52□□□□□ -1.37
RTTN-208ENST00000581709 PPT1P50897 306 aa6.52□□□□□ -1.37
RTTN-208ENST00000581709 AMTNQ6UX39 209 aa6.52□□□□□ -1.37
RTTN-208ENST00000581709 C9orf47Q6ZRZ4 202 aa6.52□□□□□ -1.37
RTTN-208ENST00000581709 OR11H2Q8NH07 326 aa6.52□□□□□ -1.37
RTTN-208ENST00000581709 AGPAT4-IT1Q9H0P7 198 aa6.52□□□□□ -1.37
RTTN-208ENST00000581709 TMPRSS5Q9H3S3 457 aa6.52□□□□□ -1.37
RTTN-208ENST00000581709 RETNQ9HD89 108 aa6.52□□□□□ -1.37
RTTN-208ENST00000581709 TRAV1-1A0A0B4J248 108 aa6.51□□□□□ -1.37
RTTN-208ENST00000581709 SERTM2A0A1B0GWG4 89 aa6.51□□□□□ -1.37
RTTN-208ENST00000581709 ZNF705EA8MWA4 302 aaPredicted RBP6.51□□□□□ -1.37
RTTN-208ENST00000581709 BOLA2-SMG1P6H3BVE0 249 aa6.51□□□□□ -1.37
RTTN-208ENST00000581709 M0R2Z0 102 aa6.51□□□□□ -1.37
RTTN-208ENST00000581709 IFNA7P01567 189 aa6.51□□□□□ -1.37
RTTN-208ENST00000581709 HBE1P02100 147 aa6.51□□□□□ -1.37
RTTN-208ENST00000581709 CT45A10P0DMU9 189 aa6.51□□□□□ -1.37
RTTN-208ENST00000581709 CDKN1BP46527 198 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms