RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 ZNF680Q8NEM1 530 aa8.58□□□□□ -1.04
SS18-219ENST00000581570 ZNF431Q8TF32 576 aaPredicted RBP8.58□□□□□ -1.04
SS18-219ENST00000581570 FUNDC2Q9BWH2 189 aa8.58□□□□□ -1.04
SS18-219ENST00000581570 PRO0255Q9UI72 69 aa8.58□□□□□ -1.04
SS18-219ENST00000581570 PLA2G2DQ9UNK4 145 aa8.58□□□□□ -1.04
SS18-219ENST00000581570 RNF24Q9Y225 148 aa8.58□□□□□ -1.04
SS18-219ENST00000581570 PIGBOS1A0A0B4J2F0 54 aa8.57□□□□□ -1.04
SS18-219ENST00000581570 DUXBA0A1W2PPF3 345 aa8.57□□□□□ -1.04
SS18-219ENST00000581570 PSCAO43653 123 aa8.57□□□□□ -1.04
SS18-219ENST00000581570 SYNGR2O43760 224 aa8.57□□□□□ -1.04
SS18-219ENST00000581570 PRAF2O60831 178 aa8.57□□□□□ -1.04
SS18-219ENST00000581570 CT45A10P0DMU9 189 aa8.57□□□□□ -1.04
SS18-219ENST00000581570 SELENOTP62341 195 aa8.57□□□□□ -1.04
SS18-219ENST00000581570 SLAQ13239 276 aa8.57□□□□□ -1.04
SS18-219ENST00000581570 PATE2Q6UY27 113 aa8.57□□□□□ -1.04
SS18-219ENST00000581570 WFDC10BQ8IUB3 73 aa8.57□□□□□ -1.04
SS18-219ENST00000581570 C11orf72Q8NBR9 251 aa8.57□□□□□ -1.04
SS18-219ENST00000581570 ST6GAL2Q96JF0 529 aa8.57□□□□□ -1.04
SS18-219ENST00000581570 ARL6Q9H0F7 186 aa8.57□□□□□ -1.04
SS18-219ENST00000581570 SCP2D1Q9UJQ7 156 aa8.57□□□□□ -1.04
SS18-219ENST00000581570 HHLA3Q9XRX5 114 aa8.57□□□□□ -1.04
SS18-219ENST00000581570 A0A087WXM4 84 aa8.56□□□□□ -1.04
SS18-219ENST00000581570 LINC00854A0A1B0GVQ3 168 aa8.56□□□□□ -1.04
SS18-219ENST00000581570 LRCOL1A6NCL2 159 aa8.56□□□□□ -1.04
SS18-219ENST00000581570 H3BP45 60 aa8.56□□□□□ -1.04
SS18-219ENST00000581570 SPINK4O60575 86 aa8.56□□□□□ -1.04
SS18-219ENST00000581570 SLC25A6P12236 298 aa8.56□□□□□ -1.04
SS18-219ENST00000581570 CRYBA4P53673 196 aa8.56□□□□□ -1.04
SS18-219ENST00000581570 SMIM4Q8WVI0 70 aa8.56□□□□□ -1.04
SS18-219ENST00000581570 C8orf49Q96NF6 230 aa8.56□□□□□ -1.04
SS18-219ENST00000581570 ODF3Q96PU9 254 aa8.56□□□□□ -1.04
SS18-219ENST00000581570 ARV1Q9H2C2 271 aa8.56□□□□□ -1.04
SS18-219ENST00000581570 STRAPQ9Y3F4 350 aaKnown RBP8.56□□□□□ -1.04
SS18-219ENST00000581570 KLF12Q9Y4X4 402 aa8.56□□□□□ -1.04
SS18-219ENST00000581570 H3BTX0 84 aa8.55□□□□□ -1.04
SS18-219ENST00000581570 C1QBP02746 253 aa8.55□□□□□ -1.04
SS18-219ENST00000581570 CRYGDP07320 174 aa8.55□□□□□ -1.04
SS18-219ENST00000581570 TEPPQ6URK8 271 aa8.55□□□□□ -1.04
SS18-219ENST00000581570 C10orf126Q8N4M7 172 aa8.55□□□□□ -1.04
SS18-219ENST00000581570 ZBTB8BQ8NAP8 495 aaPredicted RBP8.55□□□□□ -1.04
SS18-219ENST00000581570 SLC17A3O00476 420 aa8.54□□□□□ -1.04
SS18-219ENST00000581570 ATP6V1G2O95670 118 aa8.54□□□□□ -1.04
SS18-219ENST00000581570 SLC25A5P05141 298 aaKnown RBP8.54□□□□□ -1.04
SS18-219ENST00000581570 TCL1AP56279 114 aa8.54□□□□□ -1.04
SS18-219ENST00000581570 FHL2Q14192 279 aa8.54□□□□□ -1.04
SS18-219ENST00000581570 ANXA2RQ3ZCQ2 193 aa8.54□□□□□ -1.04
SS18-219ENST00000581570 BPIFA4PQ86YQ2 179 aa8.54□□□□□ -1.04
SS18-219ENST00000581570 EIF4E3Q8N5X7 224 aaKnown RBP8.54□□□□□ -1.04
SS18-219ENST00000581570 Q8N814 137 aa8.54□□□□□ -1.04
SS18-219ENST00000581570 MIXL1Q9H2W2 232 aa8.54□□□□□ -1.04
SS18-219ENST00000581570 MCUBQ9NWR8 336 aa8.54□□□□□ -1.04
SS18-219ENST00000581570 PXMP4Q9Y6I8 212 aa8.54□□□□□ -1.04
SS18-219ENST00000581570 ANKRD20A5PA0PJZ0 165 aa8.53□□□□□ -1.04
SS18-219ENST00000581570 C7orf71A4D174 169 aa8.53□□□□□ -1.04
SS18-219ENST00000581570 E5RGE8 158 aa8.53□□□□□ -1.04
SS18-219ENST00000581570 RGS5O15539 181 aa8.53□□□□□ -1.04
SS18-219ENST00000581570 SRIP30626 198 aa8.53□□□□□ -1.04
SS18-219ENST00000581570 LINC00305Q7Z4B0 112 aa8.53□□□□□ -1.04
SS18-219ENST00000581570 VGLL1Q99990 258 aa8.53□□□□□ -1.04
SS18-219ENST00000581570 MRPL32Q9BYC8 188 aaKnown RBP8.53□□□□□ -1.04
SS18-219ENST00000581570 MRPL16Q9NX20 251 aaKnown RBP8.53□□□□□ -1.04
SS18-219ENST00000581570 LRP1Q07954 4544 aaKnown RBP8.52□□□□□ -1.04
SS18-219ENST00000581570 K7EQD1 137 aa8.52□□□□□ -1.05
SS18-219ENST00000581570 CTDSPLO15194 276 aa8.52□□□□□ -1.05
SS18-219ENST00000581570 OXTP01178 125 aa8.52□□□□□ -1.05
SS18-219ENST00000581570 RRAS2P62070 204 aaPredicted RBP8.52□□□□□ -1.05
SS18-219ENST00000581570 C4orf46Q504U0 113 aa8.52□□□□□ -1.05
SS18-219ENST00000581570 PXDC1Q5TGL8 231 aa8.52□□□□□ -1.05
SS18-219ENST00000581570 LRTM2Q8N967 370 aa8.52□□□□□ -1.05
SS18-219ENST00000581570 SAT2Q96F10 170 aaPredicted RBP8.52□□□□□ -1.05
SS18-219ENST00000581570 NPVFQ9HCQ7 196 aa8.52□□□□□ -1.05
SS18-219ENST00000581570 RABL2BQ9UNT1 228 aa8.52□□□□□ -1.05
SS18-219ENST00000581570 TRGV4A0A0C4DH28 118 aa8.51□□□□□ -1.05
SS18-219ENST00000581570 CTDSP2O14595 271 aa8.51□□□□□ -1.05
SS18-219ENST00000581570 MPDU1O75352 247 aa8.51□□□□□ -1.05
SS18-219ENST00000581570 RNASE4P34096 147 aaKnown RBP8.51□□□□□ -1.05
SS18-219ENST00000581570 CD300CQ08708 224 aa8.51□□□□□ -1.05
SS18-219ENST00000581570 SLC38A11Q08AI6 406 aa8.51□□□□□ -1.05
SS18-219ENST00000581570 ZNF415Q09FC8 603 aa8.51□□□□□ -1.05
SS18-219ENST00000581570 BTN1A1Q13410 526 aa8.51□□□□□ -1.05
SS18-219ENST00000581570 IL18Q14116 193 aa8.51□□□□□ -1.05
SS18-219ENST00000581570 TMEM128Q5BJH2 165 aa8.51□□□□□ -1.05
SS18-219ENST00000581570 IBA57Q5T440 356 aaKnown RBP8.51□□□□□ -1.05
SS18-219ENST00000581570 PCNPQ8WW12 178 aaKnown RBP8.51□□□□□ -1.05
SS18-219ENST00000581570 PSENENQ9NZ42 101 aa8.51□□□□□ -1.05
SS18-219ENST00000581570 RCL1Q9Y2P8 373 aaKnown RBP8.51□□□□□ -1.05
SS18-219ENST00000581570 KLLNB2CW77 178 aa8.5□□□□□ -1.05
SS18-219ENST00000581570 H3BQ15 152 aa8.5□□□□□ -1.05
SS18-219ENST00000581570 K7EPK0 472 aa8.5□□□□□ -1.05
SS18-219ENST00000581570 GOSR2O14653 212 aa8.5□□□□□ -1.05
SS18-219ENST00000581570 HOXB5P09067 269 aa8.5□□□□□ -1.05
SS18-219ENST00000581570 IGLC2P0DOY2 106 aa8.5□□□□□ -1.05
SS18-219ENST00000581570 GYPEP15421 78 aa8.5□□□□□ -1.05
SS18-219ENST00000581570 VAMP1P23763 118 aa8.5□□□□□ -1.05
SS18-219ENST00000581570 ERCC8Q13216 396 aa8.5□□□□□ -1.05
SS18-219ENST00000581570 Q6ZSA8 131 aa8.5□□□□□ -1.05
SS18-219ENST00000581570 FAT3Q8TDW7 4589 aa8.5□□□□□ -1.05
SS18-219ENST00000581570 NAA50Q9GZZ1 169 aaKnown RBP8.5□□□□□ -1.05
SS18-219ENST00000581570 TP53TG3Q9ULZ0 132 aa8.5□□□□□ -1.05
SS18-219ENST00000581570 TRAV5A0A0B4J249 113 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms