RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 OR8A1Q8NGG7 326 aa6.93□□□□□ -1.3
TOP3A-211ENST00000581536 SAT2Q96F10 170 aaPredicted RBP6.93□□□□□ -1.3
TOP3A-211ENST00000581536 PARD6GQ9BYG4 376 aaPredicted RBP6.93□□□□□ -1.3
TOP3A-211ENST00000581536 SLC39A9Q9NUM3 307 aa6.93□□□□□ -1.3
TOP3A-211ENST00000581536 ZNF586Q9NXT0 402 aa6.93□□□□□ -1.3
TOP3A-211ENST00000581536 DNAH2Q9P225 4427 aa6.93□□□□□ -1.3
TOP3A-211ENST00000581536 DNAH17Q9UFH2 4485 aa6.92□□□□□ -1.3
TOP3A-211ENST00000581536 SMIM9A6NGZ8 99 aa6.92□□□□□ -1.3
TOP3A-211ENST00000581536 PRAF2O60831 178 aa6.92□□□□□ -1.3
TOP3A-211ENST00000581536 DUSP14O95147 198 aaKnown RBP6.92□□□□□ -1.3
TOP3A-211ENST00000581536 RLN2P04090 185 aa6.92□□□□□ -1.3
TOP3A-211ENST00000581536 IGLC2P0DOY2 106 aa6.92□□□□□ -1.3
TOP3A-211ENST00000581536 RPL29P47914 159 aaKnown RBP6.92□□□□□ -1.3
TOP3A-211ENST00000581536 B2MP61769 119 aa6.92□□□□□ -1.3
TOP3A-211ENST00000581536 RHOBP62745 196 aa6.92□□□□□ -1.3
TOP3A-211ENST00000581536 HIST1H1AQ02539 215 aaPredicted RBP6.92□□□□□ -1.3
TOP3A-211ENST00000581536 FCN2Q15485 313 aa6.92□□□□□ -1.3
TOP3A-211ENST00000581536 LGALS9CQ6DKI2 356 aa6.92□□□□□ -1.3
TOP3A-211ENST00000581536 STX12Q86Y82 276 aa6.92□□□□□ -1.3
TOP3A-211ENST00000581536 BPIFA4PQ86YQ2 179 aa6.92□□□□□ -1.3
TOP3A-211ENST00000581536 BAP18Q8IXM2 172 aa6.92□□□□□ -1.3
TOP3A-211ENST00000581536 OR5C1Q8NGR4 320 aa6.92□□□□□ -1.3
TOP3A-211ENST00000581536 THAP6Q8TBB0 222 aa6.92□□□□□ -1.3
TOP3A-211ENST00000581536 RPUSD4Q96CM3 377 aaKnown RBP6.92□□□□□ -1.3
TOP3A-211ENST00000581536 IGF2BP2-AS1Q96M15 143 aa6.92□□□□□ -1.3
TOP3A-211ENST00000581536 ZNF331Q9NQX6 463 aaPredicted RBP6.92□□□□□ -1.3
TOP3A-211ENST00000581536 GOLT1BQ9Y3E0 138 aa6.92□□□□□ -1.3
TOP3A-211ENST00000581536 RFNGQ9Y644 331 aa6.92□□□□□ -1.3
TOP3A-211ENST00000581536 PXMP4Q9Y6I8 212 aa6.92□□□□□ -1.3
TOP3A-211ENST00000581536 IGHV4-4A0A075B6R2 117 aa6.91□□□□□ -1.3
TOP3A-211ENST00000581536 DEFB131BA0A096LNP1 70 aa6.91□□□□□ -1.3
TOP3A-211ENST00000581536 TRAV10A0A0B4J240 114 aa6.91□□□□□ -1.3
TOP3A-211ENST00000581536 C11orf94C9JXX5 98 aa6.91□□□□□ -1.3
TOP3A-211ENST00000581536 E5RGE8 158 aa6.91□□□□□ -1.3
TOP3A-211ENST00000581536 SSNA1O43805 119 aa6.91□□□□□ -1.3
TOP3A-211ENST00000581536 SPART-AS1P0CW21 52 aa6.91□□□□□ -1.3
TOP3A-211ENST00000581536 HBG1P69891 147 aa6.91□□□□□ -1.3
TOP3A-211ENST00000581536 HBG2P69892 147 aa6.91□□□□□ -1.3
TOP3A-211ENST00000581536 CLINT1Q14677 625 aa6.91□□□□□ -1.3
TOP3A-211ENST00000581536 FAM222AQ5U5X8 452 aa6.91□□□□□ -1.3
TOP3A-211ENST00000581536 SYT8Q8NBV8 401 aa6.91□□□□□ -1.3
TOP3A-211ENST00000581536 OR1L4Q8NGR5 311 aa6.91□□□□□ -1.3
TOP3A-211ENST00000581536 CHAC2Q8WUX2 184 aa6.91□□□□□ -1.3
TOP3A-211ENST00000581536 PPP1R1CQ8WVI7 109 aa6.91□□□□□ -1.3
TOP3A-211ENST00000581536 NPCDR1Q9BY65 106 aa6.91□□□□□ -1.3
TOP3A-211ENST00000581536 DKK2Q9UBU2 259 aa6.91□□□□□ -1.3
TOP3A-211ENST00000581536 BIRC6Q9NR09 4857 aa6.9□□□□□ -1.3
TOP3A-211ENST00000581536 LOC102723971A0A1B0GUV8 181 aa6.9□□□□□ -1.3
TOP3A-211ENST00000581536 MPC2O95563 127 aa6.9□□□□□ -1.3
TOP3A-211ENST00000581536 HBE1P02100 147 aa6.9□□□□□ -1.3
TOP3A-211ENST00000581536 PYYP10082 97 aa6.9□□□□□ -1.3
TOP3A-211ENST00000581536 HOXA5P20719 270 aa6.9□□□□□ -1.3
TOP3A-211ENST00000581536 DEFA1P59665 94 aa6.9□□□□□ -1.3
TOP3A-211ENST00000581536 DEFA3P59666 94 aa6.9□□□□□ -1.3
TOP3A-211ENST00000581536 CYCSP99999 105 aaKnown RBP6.9□□□□□ -1.3
TOP3A-211ENST00000581536 LCN15Q6UWW0 184 aa6.9□□□□□ -1.3
TOP3A-211ENST00000581536 MIR17HGQ75NE6 70 aa6.9□□□□□ -1.3
TOP3A-211ENST00000581536 S100A7AQ86SG5 101 aa6.9□□□□□ -1.3
TOP3A-211ENST00000581536 TMEM208Q9BTX3 173 aa6.9□□□□□ -1.3
TOP3A-211ENST00000581536 SLC25A31Q9H0C2 315 aa6.9□□□□□ -1.3
TOP3A-211ENST00000581536 YTHDF2Q9Y5A9 579 aaKnown RBP6.9□□□□□ -1.3
TOP3A-211ENST00000581536 HECTD4Q9Y4D8 3996 aa6.9□□□□□ -1.31
TOP3A-211ENST00000581536 C9orf118A6NHY6 69 aa6.89□□□□□ -1.31
TOP3A-211ENST00000581536 BOLA2-SMG1P6H3BVE0 249 aa6.89□□□□□ -1.31
TOP3A-211ENST00000581536 EIF3GO75821 320 aaKnown RBP eCLIP6.89□□□□□ -1.31
TOP3A-211ENST00000581536 NDUFB4O95168 129 aa6.89□□□□□ -1.31
TOP3A-211ENST00000581536 CT45A10P0DMU9 189 aa6.89□□□□□ -1.31
TOP3A-211ENST00000581536 HTN1P15515 57 aa6.89□□□□□ -1.31
TOP3A-211ENST00000581536 ERCC8Q13216 396 aa6.89□□□□□ -1.31
TOP3A-211ENST00000581536 RRN3P1Q2M238 152 aa6.89□□□□□ -1.31
TOP3A-211ENST00000581536 BLNKQ8WV28 456 aa6.89□□□□□ -1.31
TOP3A-211ENST00000581536 LINC01587Q99440 93 aa6.89□□□□□ -1.31
TOP3A-211ENST00000581536 PFDN5Q99471 154 aa6.89□□□□□ -1.31
TOP3A-211ENST00000581536 SLC50A1Q9BRV3 221 aa6.89□□□□□ -1.31
TOP3A-211ENST00000581536 NIPSNAP3BQ9BS92 247 aa6.89□□□□□ -1.31
TOP3A-211ENST00000581536 SLC25A2Q9BXI2 301 aa6.89□□□□□ -1.31
TOP3A-211ENST00000581536 SMIM3Q9BZL3 60 aa6.89□□□□□ -1.31
TOP3A-211ENST00000581536 WDR61Q9GZS3 305 aaKnown RBP6.89□□□□□ -1.31
TOP3A-211ENST00000581536 WFDC1Q9HC57 220 aa6.89□□□□□ -1.31
TOP3A-211ENST00000581536 PPP1R14DQ9NXH3 145 aa6.89□□□□□ -1.31
TOP3A-211ENST00000581536 ALG5Q9Y673 324 aa6.89□□□□□ -1.31
TOP3A-211ENST00000581536 TRBV19A0A075B6N1 114 aa6.88□□□□□ -1.31
TOP3A-211ENST00000581536 PLAC8L1A1L4L8 177 aa6.88□□□□□ -1.31
TOP3A-211ENST00000581536 TMEM189A5PLL7 270 aa6.88□□□□□ -1.31
TOP3A-211ENST00000581536 J3KRW8 73 aa6.88□□□□□ -1.31
TOP3A-211ENST00000581536 M0R3E3 92 aa6.88□□□□□ -1.31
TOP3A-211ENST00000581536 INSP01308 110 aa6.88□□□□□ -1.31
TOP3A-211ENST00000581536 HTN3P15516 51 aa6.88□□□□□ -1.31
TOP3A-211ENST00000581536 CXCL2P19875 107 aa6.88□□□□□ -1.31
TOP3A-211ENST00000581536 EXOC3-AS1Q8N2X6 119 aa6.88□□□□□ -1.31
TOP3A-211ENST00000581536 FAM167A-AS1Q96KT0 104 aa6.88□□□□□ -1.31
TOP3A-211ENST00000581536 RNF24Q9Y225 148 aa6.88□□□□□ -1.31
TOP3A-211ENST00000581536 NACAE9PAV3 2078 aa6.88□□□□□ -1.31
TOP3A-211ENST00000581536 MPDU1O75352 247 aa6.87□□□□□ -1.31
TOP3A-211ENST00000581536 AMBPP02760 352 aa6.87□□□□□ -1.31
TOP3A-211ENST00000581536 HIST1H1EP10412 219 aaKnown RBP6.87□□□□□ -1.31
TOP3A-211ENST00000581536 RPL12P30050 165 aaKnown RBP6.87□□□□□ -1.31
TOP3A-211ENST00000581536 CDKN1BP46527 198 aa6.87□□□□□ -1.31
TOP3A-211ENST00000581536 TCTAP57738 103 aa6.87□□□□□ -1.31
TOP3A-211ENST00000581536 GUK1Q16774 197 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms