RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 TRGV9Q99603 122 aa2.86□□□□□ -1.95
SMG8-205ENST00000580798 SND1-IT1Q9HBX3 110 aa2.86□□□□□ -1.95
SMG8-205ENST00000580798 KLK5Q9Y337 293 aaPredicted RBP2.86□□□□□ -1.95
SMG8-205ENST00000580798 LY96Q9Y6Y9 160 aa2.86□□□□□ -1.95
SMG8-205ENST00000580798 CDK13Q14004 1512 aaKnown RBP2.86□□□□□ -1.95
SMG8-205ENST00000580798 RLFQ13129 1914 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 A0A087X002 238 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 IGKV6D-21A0A0A0MT36 114 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 hADV29S1A0JD25 119 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 SNRPGP15A8MWD9 76 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 NDUFC1O43677 76 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 SNRPFP62306 86 aaKnown RBP2.85□□□□□ -1.95
SMG8-205ENST00000580798 ASB16-AS1Q495Z4 193 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 CASC10Q5T4H9 136 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 SPINK14Q6IE38 97 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 REG3GQ6UW15 175 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 CAMK2N1Q7Z7J9 78 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 SERP2Q8N6R1 65 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 C3orf56Q8N813 242 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 TVP23CQ96ET8 276 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 NXT2Q9NPJ8 142 aaKnown RBP2.85□□□□□ -1.95
SMG8-205ENST00000580798 ZNF71Q9NQZ8 489 aaPredicted RBP2.85□□□□□ -1.95
SMG8-205ENST00000580798 CELA1Q9UNI1 258 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 TMEM131Q92545 1883 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 ABCA9Q8IUA7 1624 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 QRICH2Q9H0J4 1663 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 LRRIQ1Q96JM4 1722 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 C10orf71Q711Q0 1435 aa2.85□□□□□ -1.95
SMG8-205ENST00000580798 LRRC7Q96NW7 1537 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 IGLV3-10A0A075B6K4 115 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 IGHV3-72A0A0B4J1Y9 119 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 IGHV1OR15-9A0A0B4J2B8 117 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 IGHV1-24A0A0C4DH33 117 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 A0A0J9YWU9 116 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 MDFIC2A0A1B0GVS7 189 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 RPL37AP8A6NKH3 93 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 IGHV3-7P01780 117 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 NPPCP23582 126 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 MPV17P39210 176 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 EGFEM1PQ0D2K5 195 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 SS18Q15532 418 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 C9orf66Q5T8R8 295 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 CEMP1Q6PRD7 247 aaPredicted RBP2.84□□□□□ -1.95
SMG8-205ENST00000580798 SOSTDC1Q6X4U4 206 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 Q8N2B8 174 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 FAM104AQ969W3 186 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 PRAC1Q96KF2 57 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 OR8B2Q96RD0 313 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 FGF22Q9HCT0 170 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 DEC1Q9P2X7 70 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 HHLA3Q9XRX5 114 aa2.84□□□□□ -1.95
SMG8-205ENST00000580798 DOCK5Q9H7D0 1870 aa2.84□□□□□ -1.96
SMG8-205ENST00000580798 COL1A1P02452 1464 aaPredicted RBP2.84□□□□□ -1.96
SMG8-205ENST00000580798 PXDNQ92626 1479 aa2.84□□□□□ -1.96
SMG8-205ENST00000580798 ABCC1P33527 1531 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 ARAP3Q8WWN8 1544 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 TRPM1Q7Z4N2 1603 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 MARF1Q9Y4F3 1742 aaKnown RBP2.83□□□□□ -1.96
SMG8-205ENST00000580798 IGLV8-61A0A075B6I0 122 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 FXYD6-FXYD2A0A087WZ82 144 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 TRAV17A0A0B4J275 112 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 IGKV6-21A0A0C4DH24 114 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 IGHV3-16A0A0C4DH30 117 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 A6NIN4 97 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 C3orf84H3BNL1 204 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 PEBP1P30086 187 aaKnown RBP2.83□□□□□ -1.96
SMG8-205ENST00000580798 MPV17LQ2QL34 196 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 RPL7L1Q6DKI1 246 aaKnown RBP2.83□□□□□ -1.96
SMG8-205ENST00000580798 Q6ZRP5 223 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 GTSF1Q8WW33 167 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 CLEC2BQ92478 149 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 RNASE6Q93091 150 aaKnown RBP2.83□□□□□ -1.96
SMG8-205ENST00000580798 CHCHD1Q96BP2 118 aaKnown RBP2.83□□□□□ -1.96
SMG8-205ENST00000580798 AMELYQ99218 206 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 FGF23Q9GZV9 251 aaPredicted RBP2.83□□□□□ -1.96
SMG8-205ENST00000580798 FXYD6Q9H0Q3 95 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 NHP2Q9NX24 153 aaKnown RBP2.83□□□□□ -1.96
SMG8-205ENST00000580798 SIPA1L1O43166 1804 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 TDRD15B5MCY1 1934 aaKnown RBP2.83□□□□□ -1.96
SMG8-205ENST00000580798 ARHGEF12Q9NZN5 1544 aa2.83□□□□□ -1.96
SMG8-205ENST00000580798 SPHKAPQ2M3C7 1700 aa2.82□□□□□ -1.96
SMG8-205ENST00000580798 ATG2AQ2TAZ0 1938 aa2.82□□□□□ -1.96
SMG8-205ENST00000580798 TRIP11Q15643 1979 aa2.82□□□□□ -1.96
SMG8-205ENST00000580798 IGLV1-50A0A075B6I6 118 aa2.82□□□□□ -1.96
SMG8-205ENST00000580798 TRAV1-1A0A0B4J248 108 aa2.82□□□□□ -1.96
SMG8-205ENST00000580798 IGKV1-12A0A0C4DH73 117 aa2.82□□□□□ -1.96
SMG8-205ENST00000580798 A0A0J9YXY3 114 aa2.82□□□□□ -1.96
SMG8-205ENST00000580798 IGKV1D-12P01611 117 aa2.82□□□□□ -1.96
SMG8-205ENST00000580798 IGKV1-16P04430 117 aa2.82□□□□□ -1.96
SMG8-205ENST00000580798 CCL4P13236 92 aa2.82□□□□□ -1.96
SMG8-205ENST00000580798 TSPEAR-AS2P59090 65 aa2.82□□□□□ -1.96
SMG8-205ENST00000580798 UBE2G1P62253 170 aa2.82□□□□□ -1.96
SMG8-205ENST00000580798 MRPL51Q4U2R6 128 aaKnown RBP2.82□□□□□ -1.96
SMG8-205ENST00000580798 SPANXN1Q5VSR9 72 aa2.82□□□□□ -1.96
SMG8-205ENST00000580798 FAM104BQ5XKR9 115 aa2.82□□□□□ -1.96
SMG8-205ENST00000580798 CGB2Q6NT52 195 aa2.82□□□□□ -1.96
SMG8-205ENST00000580798 FP248Q71RG6 208 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms