RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-208ENST00000580584 PARD6GQ9BYG4 376 aaPredicted RBP11.05□□□□□ -0.64
PMP22-208ENST00000580584 ZNF586Q9NXT0 402 aa11.05□□□□□ -0.64
PMP22-208ENST00000580584 TEX48A0A1B0GUV7 120 aa11.04□□□□□ -0.64
PMP22-208ENST00000580584 MPDU1O75352 247 aa11.04□□□□□ -0.64
PMP22-208ENST00000580584 CYCSP99999 105 aaKnown RBP11.04□□□□□ -0.64
PMP22-208ENST00000580584 PYYP10082 97 aa11.03□□□□□ -0.64
PMP22-208ENST00000580584 AZU1P20160 251 aa11.03□□□□□ -0.64
PMP22-208ENST00000580584 CDKN1BP46527 198 aa11.03□□□□□ -0.64
PMP22-208ENST00000580584 KIR3DS1Q14943 382 aa11.03□□□□□ -0.64
PMP22-208ENST00000580584 GUK1Q16774 197 aa11.03□□□□□ -0.64
PMP22-208ENST00000580584 OR10J6PQ8NGY7 276 aa11.03□□□□□ -0.64
PMP22-208ENST00000580584 NDUFAF3Q9BU61 184 aa11.03□□□□□ -0.64
PMP22-208ENST00000580584 FRAS1Q86XX4 4008 aa11.02□□□□□ -0.64
PMP22-208ENST00000580584 TRBV19A0A075B6N1 114 aa11.02□□□□□ -0.65
PMP22-208ENST00000580584 HTN1P15515 57 aa11.02□□□□□ -0.65
PMP22-208ENST00000580584 DAD1P61803 113 aa11.02□□□□□ -0.65
PMP22-208ENST00000580584 LINC01587Q99440 93 aa11.02□□□□□ -0.65
PMP22-208ENST00000580584 WDR61Q9GZS3 305 aaKnown RBP11.02□□□□□ -0.65
PMP22-208ENST00000580584 PLAC8L1A1L4L8 177 aa11.01□□□□□ -0.65
PMP22-208ENST00000580584 J3KRW8 73 aa11.01□□□□□ -0.65
PMP22-208ENST00000580584 M0R3E3 92 aa11.01□□□□□ -0.65
PMP22-208ENST00000580584 NDUFB4O95168 129 aa11.01□□□□□ -0.65
PMP22-208ENST00000580584 MPC2O95563 127 aa11.01□□□□□ -0.65
PMP22-208ENST00000580584 MIR17HGQ75NE6 70 aa11.01□□□□□ -0.65
PMP22-208ENST00000580584 TMEM256Q8N2U0 113 aa11.01□□□□□ -0.65
PMP22-208ENST00000580584 BLNKQ8WV28 456 aa11.01□□□□□ -0.65
PMP22-208ENST00000580584 SLC25A2Q9BXI2 301 aa11.01□□□□□ -0.65
PMP22-208ENST00000580584 TMEM14CQ9P0S9 112 aa11.01□□□□□ -0.65
PMP22-208ENST00000580584 DNAH10Q8IVF4 4471 aa11.01□□□□□ -0.65
PMP22-208ENST00000580584 ZNF253O75346 499 aa11□□□□□ -0.65
PMP22-208ENST00000580584 PET100P0DJ07 73 aa11□□□□□ -0.65
PMP22-208ENST00000580584 HIST1H1EP10412 219 aaKnown RBP11□□□□□ -0.65
PMP22-208ENST00000580584 TSPOP30536 169 aa11□□□□□ -0.65
PMP22-208ENST00000580584 TAS2R60P59551 318 aa11□□□□□ -0.65
PMP22-208ENST00000580584 OXA1LQ15070 435 aa11□□□□□ -0.65
PMP22-208ENST00000580584 FCN2Q15485 313 aa11□□□□□ -0.65
PMP22-208ENST00000580584 GFI1BQ5VTD9 330 aa11□□□□□ -0.65
PMP22-208ENST00000580584 ATP5SQ99766 215 aa11□□□□□ -0.65
PMP22-208ENST00000580584 SMIM3Q9BZL3 60 aa11□□□□□ -0.65
PMP22-208ENST00000580584 MBD2Q9UBB5 411 aa11□□□□□ -0.65
PMP22-208ENST00000580584 TIMM9Q9Y5J7 89 aa11□□□□□ -0.65
PMP22-208ENST00000580584 LYRM9A8MSI8 78 aa10.99□□□□□ -0.65
PMP22-208ENST00000580584 NPIPB6E9PJ23 425 aa10.99□□□□□ -0.65
PMP22-208ENST00000580584 CT45A10P0DMU9 189 aa10.99□□□□□ -0.65
PMP22-208ENST00000580584 DEFB130BP0DP73 79 aa10.99□□□□□ -0.65
PMP22-208ENST00000580584 DEFB130AP0DP74 79 aa10.99□□□□□ -0.65
PMP22-208ENST00000580584 EXOC3-AS1Q8N2X6 119 aa10.99□□□□□ -0.65
PMP22-208ENST00000580584 FAM167A-AS1Q96KT0 104 aa10.99□□□□□ -0.65
PMP22-208ENST00000580584 KCNIP2Q9NS61 270 aa10.99□□□□□ -0.65
PMP22-208ENST00000580584 HSPB11Q9Y547 144 aa10.99□□□□□ -0.65
PMP22-208ENST00000580584 ALG5Q9Y673 324 aa10.99□□□□□ -0.65
PMP22-208ENST00000580584 RPL12P30050 165 aaKnown RBP10.98□□□□□ -0.65
PMP22-208ENST00000580584 ERCC8Q13216 396 aa10.98□□□□□ -0.65
PMP22-208ENST00000580584 TMEM88Q6PEY1 159 aa10.98□□□□□ -0.65
PMP22-208ENST00000580584 MRPL53Q96EL3 112 aaKnown RBP10.98□□□□□ -0.65
PMP22-208ENST00000580584 C16orf74Q96GX8 76 aa10.98□□□□□ -0.65
PMP22-208ENST00000580584 DNAH6Q9C0G6 4158 aa10.98□□□□□ -0.65
PMP22-208ENST00000580584 H7BYZ3 331 aa10.97□□□□□ -0.65
PMP22-208ENST00000580584 OR10J4P0C629 311 aa10.97□□□□□ -0.65
PMP22-208ENST00000580584 P0DMU3 169 aa10.97□□□□□ -0.65
PMP22-208ENST00000580584 FAM231AP0DMU4 169 aa10.97□□□□□ -0.65
PMP22-208ENST00000580584 FAM231CP0DMU5 169 aa10.97□□□□□ -0.65
PMP22-208ENST00000580584 LEPP41159 167 aa10.97□□□□□ -0.65
PMP22-208ENST00000580584 PDE6HQ13956 83 aa10.97□□□□□ -0.65
PMP22-208ENST00000580584 RNASE8Q8TDE3 154 aaKnown RBP10.97□□□□□ -0.65
PMP22-208ENST00000580584 FAM210BQ96KR6 192 aa10.97□□□□□ -0.65
PMP22-208ENST00000580584 IGKV2-40A0A087WW87 121 aaPredicted RBP10.96□□□□□ -0.65
PMP22-208ENST00000580584 TRAV12-3A0A0B4J271 114 aa10.96□□□□□ -0.65
PMP22-208ENST00000580584 C17orf112F2Z3M2 114 aa10.96□□□□□ -0.65
PMP22-208ENST00000580584 IGKV2D-40P01614 121 aaPredicted RBP10.96□□□□□ -0.65
PMP22-208ENST00000580584 ICAM4Q14773 271 aa10.96□□□□□ -0.65
PMP22-208ENST00000580584 FFAR4Q5NUL3 377 aa10.96□□□□□ -0.65
PMP22-208ENST00000580584 FAM122CQ6P4D5 195 aa10.96□□□□□ -0.65
PMP22-208ENST00000580584 POM121L12Q8N7R1 296 aa10.96□□□□□ -0.65
PMP22-208ENST00000580584 ODF3Q96PU9 254 aa10.96□□□□□ -0.65
PMP22-208ENST00000580584 C20orf144Q9BQM9 153 aa10.96□□□□□ -0.65
PMP22-208ENST00000580584 MRPL32Q9BYC8 188 aaKnown RBP10.96□□□□□ -0.65
PMP22-208ENST00000580584 OR51M1Q9H341 326 aa10.96□□□□□ -0.65
PMP22-208ENST00000580584 FUT9Q9Y231 359 aa10.96□□□□□ -0.65
PMP22-208ENST00000580584 PTTG1O95997 202 aa10.95□□□□□ -0.66
PMP22-208ENST00000580584 TMEM263Q8WUH6 116 aaKnown RBP10.95□□□□□ -0.66
PMP22-208ENST00000580584 FXYD5Q96DB9 178 aa10.95□□□□□ -0.66
PMP22-208ENST00000580584 PHYHIPLQ96FC7 376 aa10.95□□□□□ -0.66
PMP22-208ENST00000580584 PAXXQ9BUH6 204 aa10.95□□□□□ -0.66
PMP22-208ENST00000580584 AAMDCQ9H7C9 122 aa10.95□□□□□ -0.66
PMP22-208ENST00000580584 WFDC1Q9HC57 220 aa10.95□□□□□ -0.66
PMP22-208ENST00000580584 NOP10Q9NPE3 64 aaKnown RBP10.95□□□□□ -0.66
PMP22-208ENST00000580584 PRELID1Q9Y255 219 aa10.95□□□□□ -0.66
PMP22-208ENST00000580584 TIMM8BQ9Y5J9 83 aaPredicted RBP10.95□□□□□ -0.66
PMP22-208ENST00000580584 OR7C2O60412 319 aa10.94□□□□□ -0.66
PMP22-208ENST00000580584 EIF3GO75821 320 aaKnown RBP eCLIP10.94□□□□□ -0.66
PMP22-208ENST00000580584 IFNA5P01569 189 aa10.94□□□□□ -0.66
PMP22-208ENST00000580584 NBEAP1P0C6P0 100 aa10.94□□□□□ -0.66
PMP22-208ENST00000580584 ZNF493Q6ZR52 646 aa10.94□□□□□ -0.66
PMP22-208ENST00000580584 UBE2DNLQ8IWF7 75 aa10.94□□□□□ -0.66
PMP22-208ENST00000580584 SCGB1C1Q8TD33 95 aa10.94□□□□□ -0.66
PMP22-208ENST00000580584 RNF141Q8WVD5 230 aa10.94□□□□□ -0.66
PMP22-208ENST00000580584 AGPAT4-IT1Q9H0P7 198 aa10.94□□□□□ -0.66
PMP22-208ENST00000580584 HECTD4Q9Y4D8 3996 aa10.93□□□□□ -0.66
PMP22-208ENST00000580584 F5H768 121 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms