RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, human

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT20-210	ENST00000580357	OR7C2	O60412	319 aa		11.87	□□□□□ -0.51
IFT20-210	ENST00000580357	RBMY1A1	P0DJD3	496 aa	Known RBP	11.87	□□□□□ -0.51
IFT20-210	ENST00000580357	RBMY1C	P0DJD4	496 aa		11.87	□□□□□ -0.51
IFT20-210	ENST00000580357	RBMY1F	Q15415	496 aa	Known RBP	11.87	□□□□□ -0.51
IFT20-210	ENST00000580357	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.87	□□□□□ -0.51
IFT20-210	ENST00000580357	OR2G3	Q8NGZ4	309 aa		11.87	□□□□□ -0.51
IFT20-210	ENST00000580357	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.87	□□□□□ -0.51
IFT20-210	ENST00000580357	TMEM208	Q9BTX3	173 aa		11.87	□□□□□ -0.51
IFT20-210	ENST00000580357	RFNG	Q9Y644	331 aa		11.87	□□□□□ -0.51
IFT20-210	ENST00000580357	IGHV3OR16-12	A0A075B7B8	117 aa		11.86	□□□□□ -0.51
IFT20-210	ENST00000580357	DEFB4A	O15263	64 aa		11.86	□□□□□ -0.51
IFT20-210	ENST00000580357	NDUFB4	O95168	129 aa		11.86	□□□□□ -0.51
IFT20-210	ENST00000580357	INS	P01308	110 aa		11.86	□□□□□ -0.51
IFT20-210	ENST00000580357	HBE1	P02100	147 aa		11.86	□□□□□ -0.51
IFT20-210	ENST00000580357	CDKN1B	P46527	198 aa		11.86	□□□□□ -0.51
IFT20-210	ENST00000580357	SPINK13	Q1W4C9	94 aa		11.86	□□□□□ -0.51
IFT20-210	ENST00000580357	PQLC2	Q6ZP29	291 aa		11.86	□□□□□ -0.51
IFT20-210	ENST00000580357	TMEM256	Q8N2U0	113 aa		11.86	□□□□□ -0.51
IFT20-210	ENST00000580357	OR10G4	Q8NGN3	311 aa		11.86	□□□□□ -0.51
IFT20-210	ENST00000580357	OR10G9	Q8NGN4	311 aa		11.86	□□□□□ -0.51
IFT20-210	ENST00000580357	OR10G7	Q8NGN6	311 aa		11.86	□□□□□ -0.51
IFT20-210	ENST00000580357	LINC00477	Q96M19	166 aa		11.86	□□□□□ -0.51
IFT20-210	ENST00000580357	TEX48	A0A1B0GUV7	120 aa		11.85	□□□□□ -0.51
IFT20-210	ENST00000580357	RNF222	A6NCQ9	220 aa		11.85	□□□□□ -0.51
IFT20-210	ENST00000580357	JTB	O76095	146 aa		11.85	□□□□□ -0.51
IFT20-210	ENST00000580357	C1orf158	Q8N1D5	194 aa		11.85	□□□□□ -0.51
IFT20-210	ENST00000580357	HSD17B11	Q8NBQ5	300 aa		11.85	□□□□□ -0.51
IFT20-210	ENST00000580357	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.85	□□□□□ -0.51
IFT20-210	ENST00000580357	FXYD5	Q96DB9	178 aa		11.85	□□□□□ -0.51
IFT20-210	ENST00000580357	ODF3	Q96PU9	254 aa		11.85	□□□□□ -0.51
IFT20-210	ENST00000580357	C20orf144	Q9BQM9	153 aa		11.85	□□□□□ -0.51
IFT20-210	ENST00000580357	C11orf94	C9JXX5	98 aa		11.84	□□□□□ -0.51
IFT20-210	ENST00000580357		M0R2Z0	102 aa		11.84	□□□□□ -0.51
IFT20-210	ENST00000580357	CSN1S1	P47710	185 aa		11.84	□□□□□ -0.51
IFT20-210	ENST00000580357	PMS2P11	Q13670	270 aa		11.84	□□□□□ -0.51
IFT20-210	ENST00000580357	ICAM4	Q14773	271 aa		11.84	□□□□□ -0.51
IFT20-210	ENST00000580357	RRN3P1	Q2M238	152 aa		11.84	□□□□□ -0.51
IFT20-210	ENST00000580357	PRAC2	D3DTV9	90 aa		11.83	□□□□□ -0.52
IFT20-210	ENST00000580357	NPIPB6	E9PJ23	425 aa		11.83	□□□□□ -0.52
IFT20-210	ENST00000580357	CRX	O43186	299 aa	Predicted RBP	11.83	□□□□□ -0.52
IFT20-210	ENST00000580357	OR10J4	P0C629	311 aa		11.83	□□□□□ -0.52
IFT20-210	ENST00000580357	SPART-AS1	P0CW21	52 aa		11.83	□□□□□ -0.52
IFT20-210	ENST00000580357	ATP6V0C	P27449	155 aa		11.83	□□□□□ -0.52
IFT20-210	ENST00000580357	LEP	P41159	167 aa		11.83	□□□□□ -0.52
IFT20-210	ENST00000580357	NANOS2	P60321	138 aa	Known RBP	11.83	□□□□□ -0.52
IFT20-210	ENST00000580357	FAM74A1	Q5RGS3	127 aa		11.83	□□□□□ -0.52
IFT20-210	ENST00000580357	UBE2L3	P68036	154 aa	Known RBP	11.82	□□□□□ -0.52
IFT20-210	ENST00000580357	RPL7L1	Q6DKI1	246 aa	Known RBP	11.82	□□□□□ -0.52
IFT20-210	ENST00000580357	FAM122C	Q6P4D5	195 aa		11.82	□□□□□ -0.52
IFT20-210	ENST00000580357	EXOC3-AS1	Q8N2X6	119 aa		11.82	□□□□□ -0.52
IFT20-210	ENST00000580357	RPP25L	Q8N5L8	163 aa	Known RBP	11.82	□□□□□ -0.52
IFT20-210	ENST00000580357	ARL6IP6	Q8N6S5	226 aa		11.82	□□□□□ -0.52
IFT20-210	ENST00000580357	RXFP4	Q8TDU9	374 aa		11.82	□□□□□ -0.52
IFT20-210	ENST00000580357	ZNF503	Q96F45	646 aa		11.82	□□□□□ -0.52
IFT20-210	ENST00000580357	HMSD	A8MTL9	139 aa		11.81	□□□□□ -0.52
IFT20-210	ENST00000580357		G3V3Q6	166 aa		11.81	□□□□□ -0.52
IFT20-210	ENST00000580357		M0R3E3	92 aa		11.81	□□□□□ -0.52
IFT20-210	ENST00000580357	ARPC5	O15511	151 aa		11.81	□□□□□ -0.52
IFT20-210	ENST00000580357	CDC34	P49427	236 aa	Predicted RBP	11.81	□□□□□ -0.52
IFT20-210	ENST00000580357	RAB2A	P61019	212 aa		11.81	□□□□□ -0.52
IFT20-210	ENST00000580357	RAN	P62826	216 aa	Known RBP	11.81	□□□□□ -0.52
IFT20-210	ENST00000580357	C9orf47	Q6ZRZ4	202 aa		11.81	□□□□□ -0.52
IFT20-210	ENST00000580357	LINC01587	Q99440	93 aa		11.81	□□□□□ -0.52
IFT20-210	ENST00000580357	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.81	□□□□□ -0.52
IFT20-210	ENST00000580357	DNAH7	Q8WXX0	4024 aa		11.81	□□□□□ -0.52
IFT20-210	ENST00000580357	TRAV12-2	A0A075B6T6	113 aa		11.8	□□□□□ -0.52
IFT20-210	ENST00000580357		A0A0D9SG52	128 aa		11.8	□□□□□ -0.52
IFT20-210	ENST00000580357	LOC102723971	A0A1B0GUV8	181 aa		11.8	□□□□□ -0.52
IFT20-210	ENST00000580357	RBAKDN	A6NC62	111 aa		11.8	□□□□□ -0.52
IFT20-210	ENST00000580357	SLC25A5	P05141	298 aa	Known RBP	11.8	□□□□□ -0.52
IFT20-210	ENST00000580357	NMB	P08949	121 aa		11.8	□□□□□ -0.52
IFT20-210	ENST00000580357	CT45A10	P0DMU9	189 aa		11.8	□□□□□ -0.52
IFT20-210	ENST00000580357	TCTA	P57738	103 aa		11.8	□□□□□ -0.52
IFT20-210	ENST00000580357	TAS2R60	P59551	318 aa		11.8	□□□□□ -0.52
IFT20-210	ENST00000580357	ZNF345	Q14585	488 aa		11.8	□□□□□ -0.52
IFT20-210	ENST00000580357	TMEM78	Q5T7P6	136 aa		11.8	□□□□□ -0.52
IFT20-210	ENST00000580357	BAP18	Q8IXM2	172 aa		11.8	□□□□□ -0.52
IFT20-210	ENST00000580357		Q9H3A6	140 aa		11.8	□□□□□ -0.52
IFT20-210	ENST00000580357	TRBV7-9	A0A0J9YWB2	115 aa		11.79	□□□□□ -0.52
IFT20-210	ENST00000580357	LCE6A	A0A183	80 aa		11.79	□□□□□ -0.52
IFT20-210	ENST00000580357		H7BYZ3	331 aa		11.79	□□□□□ -0.52
IFT20-210	ENST00000580357	C2CD4C	Q8TF44	421 aa		11.79	□□□□□ -0.52
IFT20-210	ENST00000580357	RAB24	Q969Q5	203 aa		11.79	□□□□□ -0.52
IFT20-210	ENST00000580357	PHYHIPL	Q96FC7	376 aa		11.79	□□□□□ -0.52
IFT20-210	ENST00000580357	AGPAT4-IT1	Q9H0P7	198 aa		11.79	□□□□□ -0.52
IFT20-210	ENST00000580357	TRAV10	A0A0B4J240	114 aa		11.78	□□□□□ -0.52
IFT20-210	ENST00000580357	CXorf1	O96002	111 aa		11.78	□□□□□ -0.52
IFT20-210	ENST00000580357	STAG3L2	P0CL84	134 aa		11.78	□□□□□ -0.52
IFT20-210	ENST00000580357	STAG3L3	P0CL85	134 aa		11.78	□□□□□ -0.52
IFT20-210	ENST00000580357	EMP1	P54849	157 aa		11.78	□□□□□ -0.52
IFT20-210	ENST00000580357	ZNF493	Q6ZR52	646 aa		11.78	□□□□□ -0.52
IFT20-210	ENST00000580357	CCDC28A	Q8IWP9	274 aa		11.78	□□□□□ -0.52
IFT20-210	ENST00000580357	KCNRG	Q8N5I3	272 aa		11.78	□□□□□ -0.52
IFT20-210	ENST00000580357	CMTM2	Q8TAZ6	248 aa		11.78	□□□□□ -0.52
IFT20-210	ENST00000580357	ARPC5L	Q9BPX5	153 aa		11.78	□□□□□ -0.52
IFT20-210	ENST00000580357	OTOR	Q9NRC9	128 aa		11.78	□□□□□ -0.52
IFT20-210	ENST00000580357	BIRC6	Q9NR09	4857 aa		11.77	□□□□□ -0.52
IFT20-210	ENST00000580357	PGP	A6NDG6	321 aa		11.77	□□□□□ -0.53
IFT20-210	ENST00000580357	ZNF705G	A8MUZ8	300 aa	Predicted RBP	11.77	□□□□□ -0.53
IFT20-210	ENST00000580357	ERCC8	Q13216	396 aa		11.77	□□□□□ -0.53

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