RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 ZNF705FA8MVS1 300 aaPredicted RBP16.66■□□□□ 0.26
NDEL1-207ENST00000580012 C4BPBP20851 252 aa16.66■□□□□ 0.26
NDEL1-207ENST00000580012 MORN3Q6PF18 240 aaPredicted RBP16.66■□□□□ 0.26
NDEL1-207ENST00000580012 Q6ZWC4 215 aa16.66■□□□□ 0.26
NDEL1-207ENST00000580012 OR8A1Q8NGG7 326 aa16.66■□□□□ 0.26
NDEL1-207ENST00000580012 PHYHIPLQ96FC7 376 aa16.66■□□□□ 0.26
NDEL1-207ENST00000580012 ARL14EPLP0DKL9 152 aa16.65■□□□□ 0.26
NDEL1-207ENST00000580012 EXOC3-AS1Q8N2X6 119 aa16.65■□□□□ 0.26
NDEL1-207ENST00000580012 TMED6Q8WW62 240 aa16.65■□□□□ 0.26
NDEL1-207ENST00000580012 SPATA25Q9BR10 227 aa16.65■□□□□ 0.26
NDEL1-207ENST00000580012 PRAC2D3DTV9 90 aa16.64■□□□□ 0.25
NDEL1-207ENST00000580012 DUSP14O95147 198 aaKnown RBP16.64■□□□□ 0.25
NDEL1-207ENST00000580012 CXorf1O96002 111 aa16.64■□□□□ 0.25
NDEL1-207ENST00000580012 GCHFRP30047 84 aa16.64■□□□□ 0.25
NDEL1-207ENST00000580012 NKX2-5P52952 324 aaPredicted RBP16.64■□□□□ 0.25
NDEL1-207ENST00000580012 AMTNQ6UX39 209 aa16.64■□□□□ 0.25
NDEL1-207ENST00000580012 M0R3E3 92 aa16.63■□□□□ 0.25
NDEL1-207ENST00000580012 FHITP49789 147 aa16.63■□□□□ 0.25
NDEL1-207ENST00000580012 CNN1P51911 297 aaKnown RBP16.63■□□□□ 0.25
NDEL1-207ENST00000580012 RANP62826 216 aaKnown RBP16.63■□□□□ 0.25
NDEL1-207ENST00000580012 ICAM4Q14773 271 aa16.63■□□□□ 0.25
NDEL1-207ENST00000580012 EIF5AL1Q6IS14 154 aaKnown RBP16.63■□□□□ 0.25
NDEL1-207ENST00000580012 DPPA3Q6W0C5 159 aa16.63■□□□□ 0.25
NDEL1-207ENST00000580012 TP53TG1Q9Y2A0 90 aa16.63■□□□□ 0.25
NDEL1-207ENST00000580012 AGRNO00468 2067 aa16.62■□□□□ 0.25
NDEL1-207ENST00000580012 ZNF705DP0CH99 300 aaPredicted RBP16.62■□□□□ 0.25
NDEL1-207ENST00000580012 ZNF705BP0CI00 300 aaPredicted RBP16.62■□□□□ 0.25
NDEL1-207ENST00000580012 OR4B1Q8NGF8 309 aa16.62■□□□□ 0.25
NDEL1-207ENST00000580012 MBD3L1Q8WWY6 194 aa16.62■□□□□ 0.25
NDEL1-207ENST00000580012 OVOL2Q9BRP0 275 aa16.62■□□□□ 0.25
NDEL1-207ENST00000580012 Q9H3A6 140 aa16.62■□□□□ 0.25
NDEL1-207ENST00000580012 AAMDCQ9H7C9 122 aa16.62■□□□□ 0.25
NDEL1-207ENST00000580012 ZMAT4Q9H898 229 aa16.62■□□□□ 0.25
NDEL1-207ENST00000580012 NBEAL2Q6ZNJ1 2754 aa16.62■□□□□ 0.25
NDEL1-207ENST00000580012 RNF183Q96D59 192 aa16.61■□□□□ 0.25
NDEL1-207ENST00000580012 TMEM167BQ9NRX6 74 aa16.61■□□□□ 0.25
NDEL1-207ENST00000580012 CA1P00915 261 aaPredicted RBP16.6■□□□□ 0.25
NDEL1-207ENST00000580012 IGKV3-20P01619 116 aa16.6■□□□□ 0.25
NDEL1-207ENST00000580012 NUTF2P61970 127 aaKnown RBP16.6■□□□□ 0.25
NDEL1-207ENST00000580012 CSNK1G2-AS1Q8NCQ2 148 aa16.6■□□□□ 0.25
NDEL1-207ENST00000580012 OTORQ9NRC9 128 aa16.6■□□□□ 0.25
NDEL1-207ENST00000580012 PRB4P10163 310 aaPredicted RBP16.59■□□□□ 0.25
NDEL1-207ENST00000580012 RAB5CP51148 216 aa16.59■□□□□ 0.25
NDEL1-207ENST00000580012 HIST1H1AQ02539 215 aaPredicted RBP16.59■□□□□ 0.25
NDEL1-207ENST00000580012 ARL6IP6Q8N6S5 226 aa16.59■□□□□ 0.25
NDEL1-207ENST00000580012 RETNQ9HD89 108 aa16.59■□□□□ 0.25
NDEL1-207ENST00000580012 BOLA1Q9Y3E2 137 aa16.59■□□□□ 0.25
NDEL1-207ENST00000580012 COL7A1Q02388 2944 aa16.59■□□□□ 0.25
NDEL1-207ENST00000580012 MAP1LC3B2A6NCE7 125 aa16.58■□□□□ 0.24
NDEL1-207ENST00000580012 SPRY2O43597 315 aa16.58■□□□□ 0.24
NDEL1-207ENST00000580012 SULT1A2P50226 295 aa16.58■□□□□ 0.24
NDEL1-207ENST00000580012 DEFB135Q30KP9 77 aa16.58■□□□□ 0.24
NDEL1-207ENST00000580012 FAM213BQ8TBF2 198 aa16.58■□□□□ 0.24
NDEL1-207ENST00000580012 RCHY1Q96PM5 261 aa16.58■□□□□ 0.24
NDEL1-207ENST00000580012 MAP1LC3BQ9GZQ8 125 aa16.58■□□□□ 0.24
NDEL1-207ENST00000580012 SLC35B3Q9H1N7 401 aa16.58■□□□□ 0.24
NDEL1-207ENST00000580012 TMPRSS5Q9H3S3 457 aa16.58■□□□□ 0.24
NDEL1-207ENST00000580012 U3KQK5 164 aa16.58■□□□□ 0.24
NDEL1-207ENST00000580012 PGPA6NDG6 321 aa16.57■□□□□ 0.24
NDEL1-207ENST00000580012 NPIPB6E9PJ23 425 aa16.57■□□□□ 0.24
NDEL1-207ENST00000580012 FGF8P55075 233 aaPredicted RBP16.57■□□□□ 0.24
NDEL1-207ENST00000580012 OR10J6PQ8NGY7 276 aa16.57■□□□□ 0.24
NDEL1-207ENST00000580012 RXFP4Q8TDU9 374 aa16.57■□□□□ 0.24
NDEL1-207ENST00000580012 C1QTNF4Q9BXJ3 329 aa16.56■□□□□ 0.24
NDEL1-207ENST00000580012 A0A1W2PRE2 83 aa16.55■□□□□ 0.24
NDEL1-207ENST00000580012 C9orf47Q6ZRZ4 202 aa16.55■□□□□ 0.24
NDEL1-207ENST00000580012 SFT2D1Q8WV19 159 aa16.55■□□□□ 0.24
NDEL1-207ENST00000580012 AGPAT4-IT1Q9H0P7 198 aa16.55■□□□□ 0.24
NDEL1-207ENST00000580012 XCL2Q9UBD3 114 aa16.55■□□□□ 0.24
NDEL1-207ENST00000580012 TENM3Q9P273 2699 aa16.55■□□□□ 0.24
NDEL1-207ENST00000580012 TRAV1-1A0A0B4J248 108 aa16.54■□□□□ 0.24
NDEL1-207ENST00000580012 DIRC3C9JPN6 131 aa16.54■□□□□ 0.24
NDEL1-207ENST00000580012 CT45A10P0DMU9 189 aa16.54■□□□□ 0.24
NDEL1-207ENST00000580012 CSN1S1P47710 185 aa16.54■□□□□ 0.24
NDEL1-207ENST00000580012 FXYD7P58549 80 aa16.54■□□□□ 0.24
NDEL1-207ENST00000580012 FAM74A1Q5RGS3 127 aa16.54■□□□□ 0.24
NDEL1-207ENST00000580012 LINC00477Q96M19 166 aa16.54■□□□□ 0.24
NDEL1-207ENST00000580012 ODF3Q96PU9 254 aa16.54■□□□□ 0.24
NDEL1-207ENST00000580012 RBAKDNA6NC62 111 aa16.53■□□□□ 0.24
NDEL1-207ENST00000580012 CRXO43186 299 aaPredicted RBP16.53■□□□□ 0.24
NDEL1-207ENST00000580012 AMBPP02760 352 aa16.53■□□□□ 0.24
NDEL1-207ENST00000580012 H2AFB1P0C5Y9 115 aa16.53■□□□□ 0.24
NDEL1-207ENST00000580012 ERCC8Q13216 396 aa16.53■□□□□ 0.24
NDEL1-207ENST00000580012 FAM19A4Q96LR4 140 aa16.53■□□□□ 0.24
NDEL1-207ENST00000580012 BOLA2-SMG1P6H3BVE0 249 aa16.52■□□□□ 0.24
NDEL1-207ENST00000580012 SLC25A5P05141 298 aaKnown RBP16.52■□□□□ 0.24
NDEL1-207ENST00000580012 VGLL1Q99990 258 aa16.52■□□□□ 0.24
NDEL1-207ENST00000580012 YTHDF2Q9Y5A9 579 aaKnown RBP16.52■□□□□ 0.24
NDEL1-207ENST00000580012 STAB2Q8WWQ8 2551 aa16.51■□□□□ 0.23
NDEL1-207ENST00000580012 IGKV2-40A0A087WW87 121 aaPredicted RBP16.51■□□□□ 0.23
NDEL1-207ENST00000580012 ZNF705EA8MWA4 302 aaPredicted RBP16.51■□□□□ 0.23
NDEL1-207ENST00000580012 GGTLC3B5MD39 225 aa16.51■□□□□ 0.23
NDEL1-207ENST00000580012 IGKV2D-40P01614 121 aaPredicted RBP16.51■□□□□ 0.23
NDEL1-207ENST00000580012 SUMO1P63165 101 aaKnown RBP16.51■□□□□ 0.23
NDEL1-207ENST00000580012 SPINK13Q1W4C9 94 aa16.51■□□□□ 0.23
NDEL1-207ENST00000580012 IQCF2Q8IXL9 164 aa16.51■□□□□ 0.23
NDEL1-207ENST00000580012 CMTM2Q8TAZ6 248 aa16.51■□□□□ 0.23
NDEL1-207ENST00000580012 IGF2BP2-AS1Q96M15 143 aa16.51■□□□□ 0.23
NDEL1-207ENST00000580012 FAM74A7A6NL05 159 aa16.5■□□□□ 0.23
NDEL1-207ENST00000580012 M0R2Z0 102 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms