RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, human

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RARA-209	ENST00000579727		M0R3E3	92 aa		11.83	□□□□□ -0.52
RARA-209	ENST00000579727	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.83	□□□□□ -0.52
RARA-209	ENST00000579727	EXOC3-AS1	Q8N2X6	119 aa		11.83	□□□□□ -0.52
RARA-209	ENST00000579727	ZNF503	Q96F45	646 aa		11.83	□□□□□ -0.52
RARA-209	ENST00000579727	TRAV12-2	A0A075B6T6	113 aa		11.82	□□□□□ -0.52
RARA-209	ENST00000579727	HMGB3	O15347	200 aa	Known RBP	11.82	□□□□□ -0.52
RARA-209	ENST00000579727	RBMY1A1	P0DJD3	496 aa	Known RBP	11.82	□□□□□ -0.52
RARA-209	ENST00000579727	RBMY1C	P0DJD4	496 aa		11.82	□□□□□ -0.52
RARA-209	ENST00000579727	M6PR	P20645	277 aa		11.82	□□□□□ -0.52
RARA-209	ENST00000579727	UBE2L3	P68036	154 aa	Known RBP	11.82	□□□□□ -0.52
RARA-209	ENST00000579727	RBMY1F	Q15415	496 aa	Known RBP	11.82	□□□□□ -0.52
RARA-209	ENST00000579727	BAP18	Q8IXM2	172 aa		11.82	□□□□□ -0.52
RARA-209	ENST00000579727	RNF141	Q8WVD5	230 aa		11.82	□□□□□ -0.52
RARA-209	ENST00000579727	FXYD5	Q96DB9	178 aa		11.82	□□□□□ -0.52
RARA-209	ENST00000579727	PHYHIPL	Q96FC7	376 aa		11.82	□□□□□ -0.52
RARA-209	ENST00000579727	C11orf68	Q9H3H3	251 aa	Known RBP	11.82	□□□□□ -0.52
RARA-209	ENST00000579727	PPP1R14D	Q9NXH3	145 aa		11.82	□□□□□ -0.52
RARA-209	ENST00000579727	CXorf65	A6NEN9	183 aa		11.81	□□□□□ -0.52
RARA-209	ENST00000579727	BOLA2-SMG1P6	H3BVE0	249 aa		11.81	□□□□□ -0.52
RARA-209	ENST00000579727	ZNF253	O75346	499 aa		11.81	□□□□□ -0.52
RARA-209	ENST00000579727	NBEAP1	P0C6P0	100 aa		11.81	□□□□□ -0.52
RARA-209	ENST00000579727	MIF	P14174	115 aa		11.81	□□□□□ -0.52
RARA-209	ENST00000579727	KHDC3L	Q587J8	217 aa		11.81	□□□□□ -0.52
RARA-209	ENST00000579727	C1orf158	Q8N1D5	194 aa		11.81	□□□□□ -0.52
RARA-209	ENST00000579727	OR10G4	Q8NGN3	311 aa		11.81	□□□□□ -0.52
RARA-209	ENST00000579727	OR10G9	Q8NGN4	311 aa		11.81	□□□□□ -0.52
RARA-209	ENST00000579727	OR10G7	Q8NGN6	311 aa		11.81	□□□□□ -0.52
RARA-209	ENST00000579727	OR10J6P	Q8NGY7	276 aa		11.81	□□□□□ -0.52
RARA-209	ENST00000579727	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.8	□□□□□ -0.52
RARA-209	ENST00000579727	LCE6A	A0A183	80 aa		11.8	□□□□□ -0.52
RARA-209	ENST00000579727		A0A1W2PPV4	95 aa		11.8	□□□□□ -0.52
RARA-209	ENST00000579727	CRX	O43186	299 aa	Predicted RBP	11.8	□□□□□ -0.52
RARA-209	ENST00000579727	NANOS2	P60321	138 aa	Known RBP	11.8	□□□□□ -0.52
RARA-209	ENST00000579727	PDE6H	Q13956	83 aa		11.8	□□□□□ -0.52
RARA-209	ENST00000579727	ICAM4	Q14773	271 aa		11.8	□□□□□ -0.52
RARA-209	ENST00000579727	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.8	□□□□□ -0.52
RARA-209	ENST00000579727	OR11H4	Q8NGC9	324 aa		11.8	□□□□□ -0.52
RARA-209	ENST00000579727	hCG_2014768	A0A024R1R8	64 aa		11.79	□□□□□ -0.52
RARA-209	ENST00000579727		J3KRW8	73 aa		11.79	□□□□□ -0.52
RARA-209	ENST00000579727	INS	P01308	110 aa		11.79	□□□□□ -0.52
RARA-209	ENST00000579727	TAS2R45	P59539	299 aa		11.79	□□□□□ -0.52
RARA-209	ENST00000579727	ERCC8	Q13216	396 aa		11.79	□□□□□ -0.52
RARA-209	ENST00000579727	OR2G3	Q8NGZ4	309 aa		11.79	□□□□□ -0.52
RARA-209	ENST00000579727	C11orf45	Q8TAV5	145 aa		11.79	□□□□□ -0.52
RARA-209	ENST00000579727	IGF2BP2-AS1	Q96M15	143 aa		11.79	□□□□□ -0.52
RARA-209	ENST00000579727	PSMG3	Q9BT73	122 aa	Predicted RBP	11.79	□□□□□ -0.52
RARA-209	ENST00000579727	AAMDC	Q9H7C9	122 aa		11.79	□□□□□ -0.52
RARA-209	ENST00000579727	GOLT1B	Q9Y3E0	138 aa		11.79	□□□□□ -0.52
RARA-209	ENST00000579727	CDC34	P49427	236 aa	Predicted RBP	11.78	□□□□□ -0.52
RARA-209	ENST00000579727	EMP1	P54849	157 aa		11.78	□□□□□ -0.52
RARA-209	ENST00000579727	KIR3DS1	Q14943	382 aa		11.78	□□□□□ -0.52
RARA-209	ENST00000579727	TMEM208	Q9BTX3	173 aa		11.78	□□□□□ -0.52
RARA-209	ENST00000579727	CELA1	Q9UNI1	258 aa		11.78	□□□□□ -0.52
RARA-209	ENST00000579727	PLEC	Q15149	4684 aa	Known RBP	11.77	□□□□□ -0.52
RARA-209	ENST00000579727	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.77	□□□□□ -0.53
RARA-209	ENST00000579727	NPIPB6	E9PJ23	425 aa		11.77	□□□□□ -0.53
RARA-209	ENST00000579727	IGKV2D-40	P01614	121 aa	Predicted RBP	11.77	□□□□□ -0.53
RARA-209	ENST00000579727	AMBP	P02760	352 aa		11.77	□□□□□ -0.53
RARA-209	ENST00000579727	PRM2	P04554	102 aa		11.77	□□□□□ -0.53
RARA-209	ENST00000579727	RAN	P62826	216 aa	Known RBP	11.77	□□□□□ -0.53
RARA-209	ENST00000579727		Q6ZNX1	250 aa		11.77	□□□□□ -0.53
RARA-209	ENST00000579727	ZNF767P	Q75MW2	155 aa		11.77	□□□□□ -0.53
RARA-209	ENST00000579727	RPP25L	Q8N5L8	163 aa	Known RBP	11.77	□□□□□ -0.53
RARA-209	ENST00000579727	MRPL53	Q96EL3	112 aa	Known RBP	11.77	□□□□□ -0.53
RARA-209	ENST00000579727	CYTL1	Q9NRR1	136 aa		11.77	□□□□□ -0.53
RARA-209	ENST00000579727	ARL14EPL	P0DKL9	152 aa		11.76	□□□□□ -0.53
RARA-209	ENST00000579727	CT45A10	P0DMU9	189 aa		11.76	□□□□□ -0.53
RARA-209	ENST00000579727	SSX7	Q7RTT5	188 aa		11.76	□□□□□ -0.53
RARA-209	ENST00000579727	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.76	□□□□□ -0.53
RARA-209	ENST00000579727		Q9H3A6	140 aa		11.76	□□□□□ -0.53
RARA-209	ENST00000579727	PRELID1	Q9Y255	219 aa		11.76	□□□□□ -0.53
RARA-209	ENST00000579727	ZNF705G	A8MUZ8	300 aa	Predicted RBP	11.75	□□□□□ -0.53
RARA-209	ENST00000579727	CDKN1B	P46527	198 aa		11.75	□□□□□ -0.53
RARA-209	ENST00000579727	SERF2	P84101	59 aa		11.75	□□□□□ -0.53
RARA-209	ENST00000579727	KCNRG	Q8N5I3	272 aa		11.75	□□□□□ -0.53
RARA-209	ENST00000579727	RAB24	Q969Q5	203 aa		11.75	□□□□□ -0.53
RARA-209	ENST00000579727	ST6GAL2	Q96JF0	529 aa		11.75	□□□□□ -0.53
RARA-209	ENST00000579727	NEU1	Q99519	415 aa		11.75	□□□□□ -0.53
RARA-209	ENST00000579727	RPH3AL	Q9UNE2	315 aa		11.75	□□□□□ -0.53
RARA-209	ENST00000579727	LOC102723971	A0A1B0GUV8	181 aa		11.74	□□□□□ -0.53
RARA-209	ENST00000579727	TAAR5	O14804	337 aa		11.74	□□□□□ -0.53
RARA-209	ENST00000579727	JTB	O76095	146 aa		11.74	□□□□□ -0.53
RARA-209	ENST00000579727	HBE1	P02100	147 aa		11.74	□□□□□ -0.53
RARA-209	ENST00000579727	GFI1B	Q5VTD9	330 aa		11.74	□□□□□ -0.53
RARA-209	ENST00000579727	PQLC2	Q6ZP29	291 aa		11.74	□□□□□ -0.53
RARA-209	ENST00000579727	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.74	□□□□□ -0.53
RARA-209	ENST00000579727	HYLS1	Q96M11	299 aa		11.74	□□□□□ -0.53
RARA-209	ENST00000579727	VGLL1	Q99990	258 aa		11.74	□□□□□ -0.53
RARA-209	ENST00000579727	ARPC5L	Q9BPX5	153 aa		11.74	□□□□□ -0.53
RARA-209	ENST00000579727	MB	P02144	154 aa		11.73	□□□□□ -0.53
RARA-209	ENST00000579727	STAG3L2	P0CL84	134 aa		11.73	□□□□□ -0.53
RARA-209	ENST00000579727	STAG3L3	P0CL85	134 aa		11.73	□□□□□ -0.53
RARA-209	ENST00000579727	HTN1	P15515	57 aa		11.73	□□□□□ -0.53
RARA-209	ENST00000579727	ZNF345	Q14585	488 aa		11.73	□□□□□ -0.53
RARA-209	ENST00000579727	RRN3P1	Q2M238	152 aa		11.73	□□□□□ -0.53
RARA-209	ENST00000579727	LINC01587	Q99440	93 aa		11.73	□□□□□ -0.53
RARA-209	ENST00000579727	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.73	□□□□□ -0.53
RARA-209	ENST00000579727	AGPAT4-IT1	Q9H0P7	198 aa		11.73	□□□□□ -0.53
RARA-209	ENST00000579727	SMIM9	A6NGZ8	99 aa		11.72	□□□□□ -0.53
RARA-209	ENST00000579727	HMSD	A8MTL9	139 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms