RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 OR2K2Q8NGT1 345 aa10.4□□□□□ -0.74
TSEN54-206ENST00000579449 CMTM2Q8TAZ6 248 aa10.4□□□□□ -0.74
TSEN54-206ENST00000579449 CLEC5AQ9NY25 188 aa10.4□□□□□ -0.74
TSEN54-206ENST00000579449 EPDR1Q9UM22 224 aa10.4□□□□□ -0.74
TSEN54-206ENST00000579449 RPH3ALQ9UNE2 315 aa10.4□□□□□ -0.74
TSEN54-206ENST00000579449 PRELID1Q9Y255 219 aa10.4□□□□□ -0.74
TSEN54-206ENST00000579449 ZNF705FA8MVS1 300 aaPredicted RBP10.39□□□□□ -0.75
TSEN54-206ENST00000579449 TMEM250H0YL14 139 aa10.39□□□□□ -0.75
TSEN54-206ENST00000579449 PEX7O00628 323 aa10.39□□□□□ -0.75
TSEN54-206ENST00000579449 INSL3P51460 131 aa10.39□□□□□ -0.75
TSEN54-206ENST00000579449 CEBPGP53567 150 aa10.39□□□□□ -0.75
TSEN54-206ENST00000579449 GUCA2BQ16661 112 aa10.39□□□□□ -0.75
TSEN54-206ENST00000579449 CYB561D1Q8N8Q1 229 aa10.39□□□□□ -0.75
TSEN54-206ENST00000579449 C11orf52Q96A22 123 aa10.39□□□□□ -0.75
TSEN54-206ENST00000579449 LINC00052Q96N35 136 aa10.39□□□□□ -0.75
TSEN54-206ENST00000579449 SPAG8Q99932 426 aaPredicted RBP10.39□□□□□ -0.75
TSEN54-206ENST00000579449 MCRIP2Q9BUT9 160 aaKnown RBP10.39□□□□□ -0.75
TSEN54-206ENST00000579449 SLC35B3Q9H1N7 401 aa10.39□□□□□ -0.75
TSEN54-206ENST00000579449 DIRC3C9JPN6 131 aa10.38□□□□□ -0.75
TSEN54-206ENST00000579449 ZNF688P0C7X2 276 aa10.38□□□□□ -0.75
TSEN54-206ENST00000579449 IGLL1P15814 213 aa10.38□□□□□ -0.75
TSEN54-206ENST00000579449 CSN1S1P47710 185 aa10.38□□□□□ -0.75
TSEN54-206ENST00000579449 LCN12Q6JVE5 192 aa10.38□□□□□ -0.75
TSEN54-206ENST00000579449 ARL6IP6Q8N6S5 226 aa10.38□□□□□ -0.75
TSEN54-206ENST00000579449 ZNF738Q8NE65 137 aa10.38□□□□□ -0.75
TSEN54-206ENST00000579449 HIST1H2BAQ96A08 127 aa10.38□□□□□ -0.75
TSEN54-206ENST00000579449 MRPL53Q96EL3 112 aaKnown RBP10.38□□□□□ -0.75
TSEN54-206ENST00000579449 TCEAL7Q9BRU2 100 aa10.38□□□□□ -0.75
TSEN54-206ENST00000579449 TMEM218A2RU14 115 aa10.37□□□□□ -0.75
TSEN54-206ENST00000579449 TCRAP04437 139 aa10.37□□□□□ -0.75
TSEN54-206ENST00000579449 SFTA3P0C7M3 94 aa10.37□□□□□ -0.75
TSEN54-206ENST00000579449 AKR1C3P42330 323 aa10.37□□□□□ -0.75
TSEN54-206ENST00000579449 SNRPD3P62318 126 aaKnown RBP10.37□□□□□ -0.75
TSEN54-206ENST00000579449 OXLD1Q5BKU9 147 aa10.37□□□□□ -0.75
TSEN54-206ENST00000579449 C4orf48Q5BLP8 95 aa10.37□□□□□ -0.75
TSEN54-206ENST00000579449 GOLT1AQ6ZVE7 132 aa10.37□□□□□ -0.75
TSEN54-206ENST00000579449 C2CD4CQ8TF44 421 aa10.37□□□□□ -0.75
TSEN54-206ENST00000579449 RPUSD4Q96CM3 377 aaKnown RBP10.37□□□□□ -0.75
TSEN54-206ENST00000579449 ATG101Q9BSB4 218 aa10.37□□□□□ -0.75
TSEN54-206ENST00000579449 ZNF256Q9Y2P7 627 aaPredicted RBP10.37□□□□□ -0.75
TSEN54-206ENST00000579449 NOTCH3Q9UM47 2321 aa10.36□□□□□ -0.75
TSEN54-206ENST00000579449 TRRAPQ9Y4A5 3859 aa10.36□□□□□ -0.75
TSEN54-206ENST00000579449 OR4C46A6NHA9 309 aa10.36□□□□□ -0.75
TSEN54-206ENST00000579449 PRAC2D3DTV9 90 aa10.36□□□□□ -0.75
TSEN54-206ENST00000579449 PSMG4Q5JS54 123 aa10.36□□□□□ -0.75
TSEN54-206ENST00000579449 LINC00479Q96M42 142 aa10.36□□□□□ -0.75
TSEN54-206ENST00000579449 DERL1Q9BUN8 251 aa10.36□□□□□ -0.75
TSEN54-206ENST00000579449 IGKV2-40A0A087WW87 121 aaPredicted RBP10.35□□□□□ -0.75
TSEN54-206ENST00000579449 TRAV34A0A0B4J273 112 aa10.35□□□□□ -0.75
TSEN54-206ENST00000579449 IGKV2D-40P01614 121 aaPredicted RBP10.35□□□□□ -0.75
TSEN54-206ENST00000579449 CNN1P51911 297 aaKnown RBP10.35□□□□□ -0.75
TSEN54-206ENST00000579449 DEFB1P60022 68 aa10.35□□□□□ -0.75
TSEN54-206ENST00000579449 ZNF674Q2M3X9 581 aa10.35□□□□□ -0.75
TSEN54-206ENST00000579449 SOHLH1Q5JUK2 328 aa10.35□□□□□ -0.75
TSEN54-206ENST00000579449 PRR31Q5SQ13 230 aa10.35□□□□□ -0.75
TSEN54-206ENST00000579449 PARLQ9H300 379 aa10.35□□□□□ -0.75
TSEN54-206ENST00000579449 AGRNO00468 2067 aa10.34□□□□□ -0.75
TSEN54-206ENST00000579449 ANK2Q01484 3957 aa10.34□□□□□ -0.75
TSEN54-206ENST00000579449 SERTM2A0A1B0GWG4 89 aa10.34□□□□□ -0.75
TSEN54-206ENST00000579449 K7EQM0 130 aa10.34□□□□□ -0.75
TSEN54-206ENST00000579449 ADCYAP1P18509 176 aa10.34□□□□□ -0.75
TSEN54-206ENST00000579449 RPL35P42766 123 aaKnown RBP10.34□□□□□ -0.75
TSEN54-206ENST00000579449 DEFB131AP59861 70 aa10.34□□□□□ -0.75
TSEN54-206ENST00000579449 BEAN1Q3B7T3 259 aa10.34□□□□□ -0.75
TSEN54-206ENST00000579449 LINC01559Q495D7 138 aa10.34□□□□□ -0.75
TSEN54-206ENST00000579449 SGK494Q96LW2 274 aa10.34□□□□□ -0.75
TSEN54-206ENST00000579449 CMYA5Q8N3K9 4069 aa10.33□□□□□ -0.76
TSEN54-206ENST00000579449 TRAV8-1A0A0A6YYK1 113 aa10.33□□□□□ -0.76
TSEN54-206ENST00000579449 F6UB75 175 aa10.33□□□□□ -0.76
TSEN54-206ENST00000579449 F8W036 122 aa10.33□□□□□ -0.76
TSEN54-206ENST00000579449 WIPF1O43516 503 aa10.33□□□□□ -0.76
TSEN54-206ENST00000579449 ZNF705DP0CH99 300 aaPredicted RBP10.33□□□□□ -0.76
TSEN54-206ENST00000579449 ZNF705BP0CI00 300 aaPredicted RBP10.33□□□□□ -0.76
TSEN54-206ENST00000579449 UBE2G1P62253 170 aa10.33□□□□□ -0.76
TSEN54-206ENST00000579449 ERCC8Q13216 396 aa10.33□□□□□ -0.76
TSEN54-206ENST00000579449 TMEM183BQ1AE95 376 aa10.33□□□□□ -0.76
TSEN54-206ENST00000579449 TMEM75Q8N9X5 138 aa10.33□□□□□ -0.76
TSEN54-206ENST00000579449 VGLL1Q99990 258 aa10.33□□□□□ -0.76
TSEN54-206ENST00000579449 SMIM7Q9BQ49 75 aa10.33□□□□□ -0.76
TSEN54-206ENST00000579449 GPR61Q9BZJ8 451 aa10.33□□□□□ -0.76
TSEN54-206ENST00000579449 MAP6D1Q9H9H5 199 aa10.33□□□□□ -0.76
TSEN54-206ENST00000579449 KLF12Q9Y4X4 402 aa10.33□□□□□ -0.76
TSEN54-206ENST00000579449 RBAKDNA6NC62 111 aa10.32□□□□□ -0.76
TSEN54-206ENST00000579449 ZNF727A8MUV8 499 aa10.32□□□□□ -0.76
TSEN54-206ENST00000579449 IGLV2-11P01706 119 aa10.32□□□□□ -0.76
TSEN54-206ENST00000579449 S100A9P06702 114 aaKnown RBP10.32□□□□□ -0.76
TSEN54-206ENST00000579449 TAS2R60P59551 318 aa10.32□□□□□ -0.76
TSEN54-206ENST00000579449 ODF3L2Q3SX64 289 aa10.32□□□□□ -0.76
TSEN54-206ENST00000579449 FAM74A3Q4VXF1 159 aa10.32□□□□□ -0.76
TSEN54-206ENST00000579449 OR8A1Q8NGG7 326 aa10.32□□□□□ -0.76
TSEN54-206ENST00000579449 OR10J6PQ8NGY7 276 aa10.32□□□□□ -0.76
TSEN54-206ENST00000579449 FMC1Q96HJ9 113 aa10.32□□□□□ -0.76
TSEN54-206ENST00000579449 SEC11CQ9BY50 192 aa10.32□□□□□ -0.76
TSEN54-206ENST00000579449 PSG8Q9UQ74 426 aa10.32□□□□□ -0.76
TSEN54-206ENST00000579449 TRBV20OR9-2A0A075B6H5 130 aa10.31□□□□□ -0.76
TSEN54-206ENST00000579449 KRBOX1C9JBD0 128 aa10.31□□□□□ -0.76
TSEN54-206ENST00000579449 ATP6V1G1O75348 118 aa10.31□□□□□ -0.76
TSEN54-206ENST00000579449 CD7P09564 240 aa10.31□□□□□ -0.76
TSEN54-206ENST00000579449 CMC4P56277 68 aaPredicted RBP10.31□□□□□ -0.76
TSEN54-206ENST00000579449 FLI1Q01543 452 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms