RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 J3KRW8 73 aa5.85□□□□□ -1.47
CASC3-206ENST00000579238 SLC17A3O00476 420 aa5.85□□□□□ -1.47
CASC3-206ENST00000579238 GOSR2O14653 212 aa5.85□□□□□ -1.47
CASC3-206ENST00000579238 SSSCA1O60232 199 aa5.85□□□□□ -1.47
CASC3-206ENST00000579238 CCNKO75909 580 aa5.85□□□□□ -1.47
CASC3-206ENST00000579238 NXPH4O95158 308 aa5.85□□□□□ -1.47
CASC3-206ENST00000579238 SNRPCP09234 159 aaKnown RBP5.85□□□□□ -1.47
CASC3-206ENST00000579238 METTL15P1P0C7V9 234 aa5.85□□□□□ -1.47
CASC3-206ENST00000579238 CT45A10P0DMU9 189 aa5.85□□□□□ -1.47
CASC3-206ENST00000579238 FUSP35637 526 aaKnown RBP eCLIP5.85□□□□□ -1.47
CASC3-206ENST00000579238 UBE2MP61081 183 aaKnown RBP5.85□□□□□ -1.47
CASC3-206ENST00000579238 Q5VSD8 79 aa5.85□□□□□ -1.47
CASC3-206ENST00000579238 TMEM14EPQ6UXP3 125 aa5.85□□□□□ -1.47
CASC3-206ENST00000579238 ZNF546Q86UE3 836 aa5.85□□□□□ -1.47
CASC3-206ENST00000579238 NFE4Q86UQ8 179 aa5.85□□□□□ -1.47
CASC3-206ENST00000579238 ZNF680Q8NEM1 530 aa5.85□□□□□ -1.47
CASC3-206ENST00000579238 OR10P1Q8NGE3 313 aa5.85□□□□□ -1.47
CASC3-206ENST00000579238 MCFD2Q8NI22 146 aa5.85□□□□□ -1.47
CASC3-206ENST00000579238 ZNF431Q8TF32 576 aaPredicted RBP5.85□□□□□ -1.47
CASC3-206ENST00000579238 DEDD2Q8WXF8 326 aa5.85□□□□□ -1.47
CASC3-206ENST00000579238 SAT2Q96F10 170 aaPredicted RBP5.85□□□□□ -1.47
CASC3-206ENST00000579238 BCL7BQ9BQE9 202 aa5.85□□□□□ -1.47
CASC3-206ENST00000579238 SLIRPQ9GZT3 109 aaKnown RBP5.85□□□□□ -1.47
CASC3-206ENST00000579238 MGAT4CQ9UBM8 478 aa5.85□□□□□ -1.47
CASC3-206ENST00000579238 LINC00854A0A1B0GVQ3 168 aa5.84□□□□□ -1.47
CASC3-206ENST00000579238 NPIPB6E9PJ23 425 aa5.84□□□□□ -1.47
CASC3-206ENST00000579238 H3BTX0 84 aa5.84□□□□□ -1.47
CASC3-206ENST00000579238 AGPAT2O15120 278 aa5.84□□□□□ -1.47
CASC3-206ENST00000579238 COX7A2P2O60397 106 aa5.84□□□□□ -1.47
CASC3-206ENST00000579238 IFNA5P01569 189 aa5.84□□□□□ -1.47
CASC3-206ENST00000579238 SLC25A5P05141 298 aaKnown RBP5.84□□□□□ -1.47
CASC3-206ENST00000579238 IGLC2P0DOY2 106 aa5.84□□□□□ -1.47
CASC3-206ENST00000579238 TMBIM6P55061 237 aa5.84□□□□□ -1.47
CASC3-206ENST00000579238 TAS2R30P59541 319 aa5.84□□□□□ -1.47
CASC3-206ENST00000579238 KRTAP10-1P60331 282 aa5.84□□□□□ -1.47
CASC3-206ENST00000579238 OPCMLQ14982 345 aa5.84□□□□□ -1.47
CASC3-206ENST00000579238 PYDC2Q56P42 97 aa5.84□□□□□ -1.47
CASC3-206ENST00000579238 C11orf72Q8NBR9 251 aa5.84□□□□□ -1.47
CASC3-206ENST00000579238 LINC00467Q9BRT7 94 aa5.84□□□□□ -1.47
CASC3-206ENST00000579238 GSN-AS1Q9NRJ2 163 aa5.84□□□□□ -1.47
CASC3-206ENST00000579238 FUT9Q9Y231 359 aa5.84□□□□□ -1.47
CASC3-206ENST00000579238 ICOSQ9Y6W8 199 aa5.84□□□□□ -1.47
CASC3-206ENST00000579238 A0A087WTM6 91 aa5.83□□□□□ -1.48
CASC3-206ENST00000579238 TRGV1A0A0A0MS02 117 aa5.83□□□□□ -1.48
CASC3-206ENST00000579238 C9orf170A2RU37 121 aa5.83□□□□□ -1.48
CASC3-206ENST00000579238 C7orf71A4D174 169 aa5.83□□□□□ -1.48
CASC3-206ENST00000579238 H3BQ15 152 aa5.83□□□□□ -1.48
CASC3-206ENST00000579238 PAX4O43316 350 aa5.83□□□□□ -1.48
CASC3-206ENST00000579238 TSC22D2O75157 780 aa5.83□□□□□ -1.48
CASC3-206ENST00000579238 ZNF324O75467 553 aaPredicted RBP5.83□□□□□ -1.48
CASC3-206ENST00000579238 GUK1Q16774 197 aa5.83□□□□□ -1.48
CASC3-206ENST00000579238 ANXA2RQ3ZCQ2 193 aa5.83□□□□□ -1.48
CASC3-206ENST00000579238 MORN5Q5VZ52 161 aa5.83□□□□□ -1.48
CASC3-206ENST00000579238 TMEM37Q8WXS4 190 aa5.83□□□□□ -1.48
CASC3-206ENST00000579238 MRPL53Q96EL3 112 aaKnown RBP5.83□□□□□ -1.48
CASC3-206ENST00000579238 GGACTQ9BVM4 153 aa5.83□□□□□ -1.48
CASC3-206ENST00000579238 TNFRSF18Q9Y5U5 241 aa5.83□□□□□ -1.48
CASC3-206ENST00000579238 TRAV9-2A0A087WT02 112 aa5.82□□□□□ -1.48
CASC3-206ENST00000579238 SPINK4O60575 86 aa5.82□□□□□ -1.48
CASC3-206ENST00000579238 ZNF253O75346 499 aa5.82□□□□□ -1.48
CASC3-206ENST00000579238 DNAH10OSP0CZ25 163 aa5.82□□□□□ -1.48
CASC3-206ENST00000579238 TCL1AP56279 114 aa5.82□□□□□ -1.48
CASC3-206ENST00000579238 ARL16Q0P5N6 197 aa5.82□□□□□ -1.48
CASC3-206ENST00000579238 SLAQ13239 276 aa5.82□□□□□ -1.48
CASC3-206ENST00000579238 ICAM4Q14773 271 aa5.82□□□□□ -1.48
CASC3-206ENST00000579238 C10orf113Q5VZT2 155 aa5.82□□□□□ -1.48
CASC3-206ENST00000579238 EIF4E3Q8N5X7 224 aaKnown RBP5.82□□□□□ -1.48
CASC3-206ENST00000579238 ST6GAL2Q96JF0 529 aa5.82□□□□□ -1.48
CASC3-206ENST00000579238 MGST2Q99735 147 aa5.82□□□□□ -1.48
CASC3-206ENST00000579238 DNAJC4Q9NNZ3 241 aa5.82□□□□□ -1.48
CASC3-206ENST00000579238 PRO0255Q9UI72 69 aa5.82□□□□□ -1.48
CASC3-206ENST00000579238 KLF12Q9Y4X4 402 aa5.82□□□□□ -1.48
CASC3-206ENST00000579238 V9GYH0 126 aa5.82□□□□□ -1.48
CASC3-206ENST00000579238 VPS13BQ7Z7G8 4022 aa5.81□□□□□ -1.48
CASC3-206ENST00000579238 KLLNB2CW77 178 aa5.81□□□□□ -1.48
CASC3-206ENST00000579238 H3BMQ9 156 aa5.81□□□□□ -1.48
CASC3-206ENST00000579238 K7EP13 123 aa5.81□□□□□ -1.48
CASC3-206ENST00000579238 NOL3O60936 208 aaKnown RBP5.81□□□□□ -1.48
CASC3-206ENST00000579238 SCGB1D2O95969 90 aa5.81□□□□□ -1.48
CASC3-206ENST00000579238 OR4E1P0C645 316 aa5.81□□□□□ -1.48
CASC3-206ENST00000579238 GCSHP23434 173 aa5.81□□□□□ -1.48
CASC3-206ENST00000579238 BTN1A1Q13410 526 aa5.81□□□□□ -1.48
CASC3-206ENST00000579238 RAB31Q13636 194 aa5.81□□□□□ -1.48
CASC3-206ENST00000579238 MRPL23Q16540 153 aaKnown RBP5.81□□□□□ -1.48
CASC3-206ENST00000579238 IAH1Q2TAA2 248 aaPredicted RBP5.81□□□□□ -1.48
CASC3-206ENST00000579238 IBA57Q5T440 356 aaKnown RBP5.81□□□□□ -1.48
CASC3-206ENST00000579238 LYPD5Q6UWN5 251 aa5.81□□□□□ -1.48
CASC3-206ENST00000579238 Q6ZRG5 221 aa5.81□□□□□ -1.48
CASC3-206ENST00000579238 OR1L4Q8NGR5 311 aa5.81□□□□□ -1.48
CASC3-206ENST00000579238 FAM19A4Q96LR4 140 aa5.81□□□□□ -1.48
CASC3-206ENST00000579238 LINC00477Q96M19 166 aa5.81□□□□□ -1.48
CASC3-206ENST00000579238 FLG2Q5D862 2391 aaPredicted RBP5.81□□□□□ -1.48
CASC3-206ENST00000579238 MYCBP2O75592 4640 aa5.81□□□□□ -1.48
CASC3-206ENST00000579238 TRAV5A0A0B4J249 113 aa5.8□□□□□ -1.48
CASC3-206ENST00000579238 FAM229AH3BQW9 127 aa5.8□□□□□ -1.48
CASC3-206ENST00000579238 M0R3E3 92 aa5.8□□□□□ -1.48
CASC3-206ENST00000579238 MPDU1O75352 247 aa5.8□□□□□ -1.48
CASC3-206ENST00000579238 NDUFB6O95139 128 aa5.8□□□□□ -1.48
CASC3-206ENST00000579238 IGHV3-53P01767 116 aa5.8□□□□□ -1.48
CASC3-206ENST00000579238 SMR3BP02814 79 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms