RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 FAM24AA6NFZ4 105 aa6.48□□□□□ -1.37
CDK5RAP3-211ENST00000578996 PRAC2D3DTV9 90 aa6.48□□□□□ -1.37
CDK5RAP3-211ENST00000578996 H7BYZ3 331 aa6.48□□□□□ -1.37
CDK5RAP3-211ENST00000578996 TCRBP04435 133 aa6.48□□□□□ -1.37
CDK5RAP3-211ENST00000578996 PVALBP20472 110 aaPredicted RBP6.48□□□□□ -1.37
CDK5RAP3-211ENST00000578996 BAXQ07812 192 aa6.48□□□□□ -1.37
CDK5RAP3-211ENST00000578996 CLINT1Q14677 625 aa6.48□□□□□ -1.37
CDK5RAP3-211ENST00000578996 KIR3DS1Q14943 382 aa6.48□□□□□ -1.37
CDK5RAP3-211ENST00000578996 MIC13Q5XKP0 118 aa6.48□□□□□ -1.37
CDK5RAP3-211ENST00000578996 Q6ZR54 194 aa6.48□□□□□ -1.37
CDK5RAP3-211ENST00000578996 OR1L4Q8NGR5 311 aa6.48□□□□□ -1.37
CDK5RAP3-211ENST00000578996 ENKURQ8TC29 256 aa6.48□□□□□ -1.37
CDK5RAP3-211ENST00000578996 ZNF431Q8TF32 576 aaPredicted RBP6.48□□□□□ -1.37
CDK5RAP3-211ENST00000578996 TMEM263Q8WUH6 116 aaKnown RBP6.48□□□□□ -1.37
CDK5RAP3-211ENST00000578996 NUDT15Q9NV35 164 aa6.48□□□□□ -1.37
CDK5RAP3-211ENST00000578996 UQCC1Q9NVA1 299 aa6.48□□□□□ -1.37
CDK5RAP3-211ENST00000578996 TRAV5A0A0B4J249 113 aa6.47□□□□□ -1.37
CDK5RAP3-211ENST00000578996 FAM240BA0A1B0GVZ2 78 aa6.47□□□□□ -1.37
CDK5RAP3-211ENST00000578996 CBY3A6NI87 242 aa6.47□□□□□ -1.37
CDK5RAP3-211ENST00000578996 PFDN1O60925 122 aa6.47□□□□□ -1.37
CDK5RAP3-211ENST00000578996 MED14OSP0DP75 135 aa6.47□□□□□ -1.37
CDK5RAP3-211ENST00000578996 CCL18P55774 89 aa6.47□□□□□ -1.37
CDK5RAP3-211ENST00000578996 OR5I1Q13606 314 aa6.47□□□□□ -1.37
CDK5RAP3-211ENST00000578996 GFI1BQ5VTD9 330 aa6.47□□□□□ -1.37
CDK5RAP3-211ENST00000578996 CCDC28AQ8IWP9 274 aa6.47□□□□□ -1.37
CDK5RAP3-211ENST00000578996 C12orf45Q8N5I9 185 aaPredicted RBP6.47□□□□□ -1.37
CDK5RAP3-211ENST00000578996 RNASE8Q8TDE3 154 aaKnown RBP6.47□□□□□ -1.37
CDK5RAP3-211ENST00000578996 RNF141Q8WVD5 230 aa6.47□□□□□ -1.37
CDK5RAP3-211ENST00000578996 C2orf50Q96LR7 162 aa6.47□□□□□ -1.37
CDK5RAP3-211ENST00000578996 DNAJC4Q9NNZ3 241 aa6.47□□□□□ -1.37
CDK5RAP3-211ENST00000578996 PXMP4Q9Y6I8 212 aa6.47□□□□□ -1.37
CDK5RAP3-211ENST00000578996 PKD1P98161 4303 aa6.47□□□□□ -1.37
CDK5RAP3-211ENST00000578996 PKHD1P08F94 4074 aa6.46□□□□□ -1.37
CDK5RAP3-211ENST00000578996 TRAV12-3A0A0B4J271 114 aa6.46□□□□□ -1.38
CDK5RAP3-211ENST00000578996 GAGE12BA1L429 117 aa6.46□□□□□ -1.38
CDK5RAP3-211ENST00000578996 SNURFLB1AK76 121 aa6.46□□□□□ -1.38
CDK5RAP3-211ENST00000578996 H3BQ15 152 aa6.46□□□□□ -1.38
CDK5RAP3-211ENST00000578996 GAGE7O76087 117 aa6.46□□□□□ -1.38
CDK5RAP3-211ENST00000578996 H2AFB2P0C5Z0 115 aa6.46□□□□□ -1.38
CDK5RAP3-211ENST00000578996 GAGE12FP0CL80 117 aa6.46□□□□□ -1.38
CDK5RAP3-211ENST00000578996 GAGE12GP0CL81 117 aa6.46□□□□□ -1.38
CDK5RAP3-211ENST00000578996 GAGE12IP0CL82 117 aa6.46□□□□□ -1.38
CDK5RAP3-211ENST00000578996 IGLC2P0DOY2 106 aa6.46□□□□□ -1.38
CDK5RAP3-211ENST00000578996 FGF7P21781 194 aa6.46□□□□□ -1.38
CDK5RAP3-211ENST00000578996 FAM3BP58499 235 aaPredicted RBP6.46□□□□□ -1.38
CDK5RAP3-211ENST00000578996 RAB32Q13637 225 aa6.46□□□□□ -1.38
CDK5RAP3-211ENST00000578996 ZNF493Q6ZR52 646 aa6.46□□□□□ -1.38
CDK5RAP3-211ENST00000578996 ZNF575Q86XF7 245 aa6.46□□□□□ -1.38
CDK5RAP3-211ENST00000578996 STX12Q86Y82 276 aa6.46□□□□□ -1.38
CDK5RAP3-211ENST00000578996 PFDN5Q99471 154 aa6.46□□□□□ -1.38
CDK5RAP3-211ENST00000578996 C20orf144Q9BQM9 153 aa6.46□□□□□ -1.38
CDK5RAP3-211ENST00000578996 WDR83OSQ9Y284 106 aa6.46□□□□□ -1.38
CDK5RAP3-211ENST00000578996 hCG_2014768A0A024R1R8 64 aa6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 A0A0J9YY99 117 aa6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 NBDYA0A0U1RRE5 68 aa6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 IGSF23A1L1A6 192 aa6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 RLN2P04090 185 aa6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 CT45A10P0DMU9 189 aa6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 S100A11P31949 105 aa6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 LEPP41159 167 aa6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 SULT1A1P50225 295 aa6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 HBG1P69891 147 aa6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 HBG2P69892 147 aa6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 GUK1Q16774 197 aa6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 TMEM252Q8N6L7 170 aa6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 GNPNAT1Q96EK6 184 aaPredicted RBP6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 SAT2Q96F10 170 aaPredicted RBP6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 GPN1Q9HCN4 374 aaPredicted RBP6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 LYRM2Q9NU23 88 aaPredicted RBP6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 SLC39A9Q9NUM3 307 aa6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 ZNF586Q9NXT0 402 aa6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 LINC00588Q9Y4M8 146 aa6.45□□□□□ -1.38
CDK5RAP3-211ENST00000578996 DYNC1H1Q14204 4646 aaKnown RBP6.44□□□□□ -1.38
CDK5RAP3-211ENST00000578996 DNAH11Q96DT5 4516 aa6.44□□□□□ -1.38
CDK5RAP3-211ENST00000578996 TRAV26-1A0A087WT03 109 aa6.44□□□□□ -1.38
CDK5RAP3-211ENST00000578996 INMT-MINDY4F8WBC2 141 aa6.44□□□□□ -1.38
CDK5RAP3-211ENST00000578996 M0R3E3 92 aa6.44□□□□□ -1.38
CDK5RAP3-211ENST00000578996 PRAF2O60831 178 aa6.44□□□□□ -1.38
CDK5RAP3-211ENST00000578996 RPL29P47914 159 aaKnown RBP6.44□□□□□ -1.38
CDK5RAP3-211ENST00000578996 ERCC8Q13216 396 aa6.44□□□□□ -1.38
CDK5RAP3-211ENST00000578996 SSX7Q7RTT5 188 aa6.44□□□□□ -1.38
CDK5RAP3-211ENST00000578996 C6orf223Q8N319 242 aa6.44□□□□□ -1.38
CDK5RAP3-211ENST00000578996 ZNRF2Q8NHG8 242 aa6.44□□□□□ -1.38
CDK5RAP3-211ENST00000578996 BLNKQ8WV28 456 aa6.44□□□□□ -1.38
CDK5RAP3-211ENST00000578996 C11orf1Q9H5F2 150 aa6.44□□□□□ -1.38
CDK5RAP3-211ENST00000578996 TIMM9Q9Y5J7 89 aa6.44□□□□□ -1.38
CDK5RAP3-211ENST00000578996 PCLOQ9Y6V0 5065 aa6.43□□□□□ -1.38
CDK5RAP3-211ENST00000578996 TRBV19A0A075B6N1 114 aa6.43□□□□□ -1.38
CDK5RAP3-211ENST00000578996 NPIPB6E9PJ23 425 aa6.43□□□□□ -1.38
CDK5RAP3-211ENST00000578996 PYYP10082 97 aa6.43□□□□□ -1.38
CDK5RAP3-211ENST00000578996 M6PRP20645 277 aa6.43□□□□□ -1.38
CDK5RAP3-211ENST00000578996 TNP2Q05952 138 aa6.43□□□□□ -1.38
CDK5RAP3-211ENST00000578996 VWC2Q2TAL6 325 aa6.43□□□□□ -1.38
CDK5RAP3-211ENST00000578996 LRRC37A5PQ49AS3 106 aa6.43□□□□□ -1.38
CDK5RAP3-211ENST00000578996 GCSAMLQ5JQS6 135 aa6.43□□□□□ -1.38
CDK5RAP3-211ENST00000578996 THAP6Q8TBB0 222 aa6.43□□□□□ -1.38
CDK5RAP3-211ENST00000578996 NACAE9PAV3 2078 aa6.42□□□□□ -1.38
CDK5RAP3-211ENST00000578996 TRGV2A0A075B6R0 118 aa6.42□□□□□ -1.38
CDK5RAP3-211ENST00000578996 C7orf71A4D174 169 aa6.42□□□□□ -1.38
CDK5RAP3-211ENST00000578996 ZNF253O75346 499 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms