RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 HYLS1Q96M11 299 aa11.25□□□□□ -0.61
IFT20-208ENST00000578985 ACTR3CQ9C0K3 210 aaPredicted RBP11.25□□□□□ -0.61
IFT20-208ENST00000578985 PRELID1Q9Y255 219 aa11.25□□□□□ -0.61
IFT20-208ENST00000578985 DNAH9Q9NYC9 4486 aa11.25□□□□□ -0.61
IFT20-208ENST00000578985 CNN1P51911 297 aaKnown RBP11.24□□□□□ -0.61
IFT20-208ENST00000578985 FXYD7P58549 80 aa11.24□□□□□ -0.61
IFT20-208ENST00000578985 EIF5AP63241 154 aaKnown RBP11.24□□□□□ -0.61
IFT20-208ENST00000578985 LGALSLQ3ZCW2 172 aaPredicted RBP11.24□□□□□ -0.61
IFT20-208ENST00000578985 AKR1C8PQ5T2L2 129 aa11.24□□□□□ -0.61
IFT20-208ENST00000578985 EXOC3-AS1Q8N2X6 119 aa11.24□□□□□ -0.61
IFT20-208ENST00000578985 MRPL53Q96EL3 112 aaKnown RBP11.24□□□□□ -0.61
IFT20-208ENST00000578985 C1QTNF4Q9BXJ3 329 aa11.24□□□□□ -0.61
IFT20-208ENST00000578985 AAMDCQ9H7C9 122 aa11.24□□□□□ -0.61
IFT20-208ENST00000578985 XCL2Q9UBD3 114 aa11.24□□□□□ -0.61
IFT20-208ENST00000578985 PRAC2D3DTV9 90 aa11.23□□□□□ -0.61
IFT20-208ENST00000578985 STAG3L2P0CL84 134 aa11.23□□□□□ -0.61
IFT20-208ENST00000578985 STAG3L3P0CL85 134 aa11.23□□□□□ -0.61
IFT20-208ENST00000578985 ICAM4Q14773 271 aa11.23□□□□□ -0.61
IFT20-208ENST00000578985 AMTNQ6UX39 209 aa11.23□□□□□ -0.61
IFT20-208ENST00000578985 OR10J6PQ8NGY7 276 aa11.23□□□□□ -0.61
IFT20-208ENST00000578985 PHYHIPLQ96FC7 376 aa11.23□□□□□ -0.61
IFT20-208ENST00000578985 SLC35B3Q9H1N7 401 aa11.23□□□□□ -0.61
IFT20-208ENST00000578985 KMT2CQ8NEZ4 4911 aaKnown RBP11.23□□□□□ -0.61
IFT20-208ENST00000578985 TENM3Q9P273 2699 aa11.22□□□□□ -0.61
IFT20-208ENST00000578985 M0R3E3 92 aa11.22□□□□□ -0.61
IFT20-208ENST00000578985 ARL14EPLP0DKL9 152 aa11.22□□□□□ -0.61
IFT20-208ENST00000578985 RANP62826 216 aaKnown RBP11.22□□□□□ -0.61
IFT20-208ENST00000578985 ZFP69Q49AA0 526 aa11.22□□□□□ -0.61
IFT20-208ENST00000578985 OR11H2Q8NH07 326 aa11.22□□□□□ -0.61
IFT20-208ENST00000578985 WWC2-AS2Q96NR7 200 aa11.22□□□□□ -0.61
IFT20-208ENST00000578985 CTXND1A0A1B0GTU2 59 aa11.21□□□□□ -0.61
IFT20-208ENST00000578985 SEC11BP0C7V7 166 aa11.21□□□□□ -0.61
IFT20-208ENST00000578985 GCHFRP30047 84 aa11.21□□□□□ -0.61
IFT20-208ENST00000578985 BAP18Q8IXM2 172 aa11.21□□□□□ -0.61
IFT20-208ENST00000578985 LYPD1Q8N2G4 141 aa11.21□□□□□ -0.61
IFT20-208ENST00000578985 CSNK1G2-AS1Q8NCQ2 148 aa11.21□□□□□ -0.61
IFT20-208ENST00000578985 RARRES2Q99969 163 aa11.21□□□□□ -0.61
IFT20-208ENST00000578985 Q9H3A6 140 aa11.21□□□□□ -0.61
IFT20-208ENST00000578985 PPP1R14DQ9NXH3 145 aa11.21□□□□□ -0.61
IFT20-208ENST00000578985 CXorf1O96002 111 aa11.2□□□□□ -0.62
IFT20-208ENST00000578985 TPT1P13693 172 aaKnown RBP11.2□□□□□ -0.62
IFT20-208ENST00000578985 ZNF726P1Q15940 193 aa11.2□□□□□ -0.62
IFT20-208ENST00000578985 SSX7Q7RTT5 188 aa11.2□□□□□ -0.62
IFT20-208ENST00000578985 STOML3Q8TAV4 291 aa11.2□□□□□ -0.62
IFT20-208ENST00000578985 COL7A1Q02388 2944 aa11.2□□□□□ -0.62
IFT20-208ENST00000578985 BOLA2-SMG1P6H3BVE0 249 aa11.19□□□□□ -0.62
IFT20-208ENST00000578985 AMBPP02760 352 aa11.19□□□□□ -0.62
IFT20-208ENST00000578985 SPINK13Q1W4C9 94 aa11.19□□□□□ -0.62
IFT20-208ENST00000578985 EDA2RQ9HAV5 297 aa11.19□□□□□ -0.62
IFT20-208ENST00000578985 OTORQ9NRC9 128 aa11.19□□□□□ -0.62
IFT20-208ENST00000578985 PLA2G2EQ9NZK7 142 aa11.19□□□□□ -0.62
IFT20-208ENST00000578985 UMAD1C9J7I0 102 aa11.18□□□□□ -0.62
IFT20-208ENST00000578985 NPIPB6E9PJ23 425 aa11.18□□□□□ -0.62
IFT20-208ENST00000578985 M0R2Z0 102 aa11.18□□□□□ -0.62
IFT20-208ENST00000578985 CSN1S1P47710 185 aa11.18□□□□□ -0.62
IFT20-208ENST00000578985 IQCF2Q8IXL9 164 aa11.18□□□□□ -0.62
IFT20-208ENST00000578985 C9orf62Q8N4C0 152 aa11.18□□□□□ -0.62
IFT20-208ENST00000578985 SUN5Q8TC36 379 aa11.18□□□□□ -0.62
IFT20-208ENST00000578985 TMED6Q8WW62 240 aa11.18□□□□□ -0.62
IFT20-208ENST00000578985 TMEM167BQ9NRX6 74 aa11.18□□□□□ -0.62
IFT20-208ENST00000578985 STAB2Q8WWQ8 2551 aa11.17□□□□□ -0.62
IFT20-208ENST00000578985 IGKV2-40A0A087WW87 121 aaPredicted RBP11.17□□□□□ -0.62
IFT20-208ENST00000578985 PGPA6NDG6 321 aa11.17□□□□□ -0.62
IFT20-208ENST00000578985 ZNF705EA8MWA4 302 aaPredicted RBP11.17□□□□□ -0.62
IFT20-208ENST00000578985 IGKV2D-40P01614 121 aaPredicted RBP11.17□□□□□ -0.62
IFT20-208ENST00000578985 ERCC8Q13216 396 aa11.17□□□□□ -0.62
IFT20-208ENST00000578985 FAM74A1Q5RGS3 127 aa11.17□□□□□ -0.62
IFT20-208ENST00000578985 RXFP4Q8TDU9 374 aa11.17□□□□□ -0.62
IFT20-208ENST00000578985 IGF2BP2-AS1Q96M15 143 aa11.17□□□□□ -0.62
IFT20-208ENST00000578985 LINC00477Q96M19 166 aa11.17□□□□□ -0.62
IFT20-208ENST00000578985 GOLT1BQ9Y3E0 138 aa11.17□□□□□ -0.62
IFT20-208ENST00000578985 HUWE1Q7Z6Z7 4374 aaKnown RBP11.17□□□□□ -0.62
IFT20-208ENST00000578985 A0A0J9YWU9 116 aa11.16□□□□□ -0.62
IFT20-208ENST00000578985 MAP1LC3B2A6NCE7 125 aa11.16□□□□□ -0.62
IFT20-208ENST00000578985 CT45A10P0DMU9 189 aa11.16□□□□□ -0.62
IFT20-208ENST00000578985 TSPOP30536 169 aa11.16□□□□□ -0.62
IFT20-208ENST00000578985 FGF8P55075 233 aaPredicted RBP11.16□□□□□ -0.62
IFT20-208ENST00000578985 EIF5AL1Q6IS14 154 aaKnown RBP11.16□□□□□ -0.62
IFT20-208ENST00000578985 C9orf47Q6ZRZ4 202 aa11.16□□□□□ -0.62
IFT20-208ENST00000578985 SLC51BQ86UW2 128 aa11.16□□□□□ -0.62
IFT20-208ENST00000578985 CMTM2Q8TAZ6 248 aa11.16□□□□□ -0.62
IFT20-208ENST00000578985 FAM213BQ8TBF2 198 aa11.16□□□□□ -0.62
IFT20-208ENST00000578985 MAP1LC3BQ9GZQ8 125 aa11.16□□□□□ -0.62
IFT20-208ENST00000578985 AGPAT4-IT1Q9H0P7 198 aa11.16□□□□□ -0.62
IFT20-208ENST00000578985 X6R8D5 127 aa11.16□□□□□ -0.62
IFT20-208ENST00000578985 IGHV3OR16-12A0A075B7B8 117 aa11.15□□□□□ -0.62
IFT20-208ENST00000578985 CRXO43186 299 aaPredicted RBP11.15□□□□□ -0.62
IFT20-208ENST00000578985 INSP01308 110 aa11.15□□□□□ -0.62
IFT20-208ENST00000578985 LEPP41159 167 aa11.15□□□□□ -0.62
IFT20-208ENST00000578985 CDKN1BP46527 198 aa11.15□□□□□ -0.62
IFT20-208ENST00000578985 FHITP49789 147 aa11.15□□□□□ -0.62
IFT20-208ENST00000578985 DPPA3Q6W0C5 159 aa11.15□□□□□ -0.62
IFT20-208ENST00000578985 ZNF705AQ6ZN79 300 aaPredicted RBP11.15□□□□□ -0.62
IFT20-208ENST00000578985 C1orf158Q8N1D5 194 aa11.15□□□□□ -0.62
IFT20-208ENST00000578985 ODF3Q96PU9 254 aa11.15□□□□□ -0.62
IFT20-208ENST00000578985 VGLL1Q99990 258 aa11.15□□□□□ -0.62
IFT20-208ENST00000578985 TMPRSS5Q9H3S3 457 aa11.15□□□□□ -0.62
IFT20-208ENST00000578985 TRAV12-2A0A075B6T6 113 aa11.14□□□□□ -0.63
IFT20-208ENST00000578985 DIRC3C9JPN6 131 aa11.14□□□□□ -0.63
IFT20-208ENST00000578985 MIFP14174 115 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms