RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 LCN15Q6UWW0 184 aa6.21□□□□□ -1.42
GGA3-207ENST00000578896 ZNF546Q86UE3 836 aa6.21□□□□□ -1.42
GGA3-207ENST00000578896 TMEM263Q8WUH6 116 aaKnown RBP6.21□□□□□ -1.42
GGA3-207ENST00000578896 MITD1Q8WV92 249 aa6.21□□□□□ -1.42
GGA3-207ENST00000578896 SEC22CQ9BRL7 303 aa6.21□□□□□ -1.42
GGA3-207ENST00000578896 KRTAP1-5Q9BYS1 174 aa6.21□□□□□ -1.42
GGA3-207ENST00000578896 TRAV6A0A075B6T7 132 aa6.2□□□□□ -1.42
GGA3-207ENST00000578896 FNDC10F2Z333 226 aa6.2□□□□□ -1.42
GGA3-207ENST00000578896 H7BYZ3 331 aa6.2□□□□□ -1.42
GGA3-207ENST00000578896 PLA2G10O15496 165 aa6.2□□□□□ -1.42
GGA3-207ENST00000578896 IGLC2P0DOY2 106 aa6.2□□□□□ -1.42
GGA3-207ENST00000578896 IL7P13232 177 aa6.2□□□□□ -1.42
GGA3-207ENST00000578896 CAMLGP49069 296 aa6.2□□□□□ -1.42
GGA3-207ENST00000578896 TAS2R30P59541 319 aa6.2□□□□□ -1.42
GGA3-207ENST00000578896 ESRGQ1W209 222 aa6.2□□□□□ -1.42
GGA3-207ENST00000578896 NRARPQ7Z6K4 114 aa6.2□□□□□ -1.42
GGA3-207ENST00000578896 BPIFA4PQ86YQ2 179 aa6.2□□□□□ -1.42
GGA3-207ENST00000578896 CCDC28AQ8IWP9 274 aa6.2□□□□□ -1.42
GGA3-207ENST00000578896 OR10J6PQ8NGY7 276 aa6.2□□□□□ -1.42
GGA3-207ENST00000578896 GNPNAT1Q96EK6 184 aaPredicted RBP6.2□□□□□ -1.42
GGA3-207ENST00000578896 SAT2Q96F10 170 aaPredicted RBP6.2□□□□□ -1.42
GGA3-207ENST00000578896 SLC50A1Q9BRV3 221 aa6.2□□□□□ -1.42
GGA3-207ENST00000578896 Q9H8V8 135 aa6.2□□□□□ -1.42
GGA3-207ENST00000578896 ZNF586Q9NXT0 402 aa6.2□□□□□ -1.42
GGA3-207ENST00000578896 CENPXA8MT69 81 aa6.19□□□□□ -1.42
GGA3-207ENST00000578896 ZNF701M0R085 212 aaPredicted RBP6.19□□□□□ -1.42
GGA3-207ENST00000578896 M0R3E3 92 aa6.19□□□□□ -1.42
GGA3-207ENST00000578896 CXCL2P19875 107 aa6.19□□□□□ -1.42
GGA3-207ENST00000578896 CAV2P51636 162 aa6.19□□□□□ -1.42
GGA3-207ENST00000578896 PXDC1Q5TGL8 231 aa6.19□□□□□ -1.42
GGA3-207ENST00000578896 ZNF493Q6ZR52 646 aa6.19□□□□□ -1.42
GGA3-207ENST00000578896 Q6ZTI0 123 aa6.19□□□□□ -1.42
GGA3-207ENST00000578896 SPATA12Q7Z6I5 190 aa6.19□□□□□ -1.42
GGA3-207ENST00000578896 S100A7AQ86SG5 101 aa6.19□□□□□ -1.42
GGA3-207ENST00000578896 LINC00612Q8N6U2 182 aa6.19□□□□□ -1.42
GGA3-207ENST00000578896 RXFP4Q8TDU9 374 aa6.19□□□□□ -1.42
GGA3-207ENST00000578896 ZNF431Q8TF32 576 aaPredicted RBP6.19□□□□□ -1.42
GGA3-207ENST00000578896 C20orf85Q9H1P6 137 aa6.19□□□□□ -1.42
GGA3-207ENST00000578896 TMPRSS5Q9H3S3 457 aa6.19□□□□□ -1.42
GGA3-207ENST00000578896 DNAJC4Q9NNZ3 241 aa6.19□□□□□ -1.42
GGA3-207ENST00000578896 UBE2L5PA0A1B0GUS4 154 aa6.18□□□□□ -1.42
GGA3-207ENST00000578896 IGSF23A1L1A6 192 aa6.18□□□□□ -1.42
GGA3-207ENST00000578896 C5orf51A6NDU8 294 aa6.18□□□□□ -1.42
GGA3-207ENST00000578896 SNURFLB1AK76 121 aa6.18□□□□□ -1.42
GGA3-207ENST00000578896 RLN2P04090 185 aa6.18□□□□□ -1.42
GGA3-207ENST00000578896 M6PRP20645 277 aa6.18□□□□□ -1.42
GGA3-207ENST00000578896 FUSP35637 526 aaKnown RBP eCLIP6.18□□□□□ -1.42
GGA3-207ENST00000578896 KRTAP10-2P60368 255 aa6.18□□□□□ -1.42
GGA3-207ENST00000578896 S100A10P60903 97 aa6.18□□□□□ -1.42
GGA3-207ENST00000578896 BTN1A1Q13410 526 aa6.18□□□□□ -1.42
GGA3-207ENST00000578896 ZNF846Q147U1 533 aa6.18□□□□□ -1.42
GGA3-207ENST00000578896 GCSAMLQ5JQS6 135 aa6.18□□□□□ -1.42
GGA3-207ENST00000578896 Q6ZQT7 251 aa6.18□□□□□ -1.42
GGA3-207ENST00000578896 Q6ZRG5 221 aa6.18□□□□□ -1.42
GGA3-207ENST00000578896 MAPKAPK5-AS1Q8N8E1 139 aa6.18□□□□□ -1.42
GGA3-207ENST00000578896 GGACTQ9BVM4 153 aa6.18□□□□□ -1.42
GGA3-207ENST00000578896 C11orf1Q9H5F2 150 aa6.18□□□□□ -1.42
GGA3-207ENST00000578896 GSN-AS1Q9NRJ2 163 aa6.18□□□□□ -1.42
GGA3-207ENST00000578896 WDR83OSQ9Y284 106 aa6.18□□□□□ -1.42
GGA3-207ENST00000578896 PXMP4Q9Y6I8 212 aa6.18□□□□□ -1.42
GGA3-207ENST00000578896 HERC1Q15751 4861 aa6.17□□□□□ -1.42
GGA3-207ENST00000578896 NPIPB6E9PJ23 425 aa6.17□□□□□ -1.42
GGA3-207ENST00000578896 LYRM1O43325 122 aa6.17□□□□□ -1.42
GGA3-207ENST00000578896 NDUFB4O95168 129 aa6.17□□□□□ -1.42
GGA3-207ENST00000578896 TCRBP04435 133 aa6.17□□□□□ -1.42
GGA3-207ENST00000578896 PYYP10082 97 aa6.17□□□□□ -1.42
GGA3-207ENST00000578896 LEPP41159 167 aa6.17□□□□□ -1.42
GGA3-207ENST00000578896 BAXQ07812 192 aa6.17□□□□□ -1.42
GGA3-207ENST00000578896 CD300CQ08708 224 aa6.17□□□□□ -1.42
GGA3-207ENST00000578896 EXOC3-AS1Q8N2X6 119 aa6.17□□□□□ -1.42
GGA3-207ENST00000578896 BLNKQ8WV28 456 aa6.17□□□□□ -1.42
GGA3-207ENST00000578896 VSIG2Q96IQ7 327 aa6.17□□□□□ -1.42
GGA3-207ENST00000578896 C20orf144Q9BQM9 153 aa6.17□□□□□ -1.42
GGA3-207ENST00000578896 SLC39A9Q9NUM3 307 aa6.17□□□□□ -1.42
GGA3-207ENST00000578896 UQCC1Q9NVA1 299 aa6.17□□□□□ -1.42
GGA3-207ENST00000578896 TP53TG3Q9ULZ0 132 aa6.17□□□□□ -1.42
GGA3-207ENST00000578896 RNF24Q9Y225 148 aa6.17□□□□□ -1.42
GGA3-207ENST00000578896 A0A096LPF7 62 aa6.16□□□□□ -1.42
GGA3-207ENST00000578896 C7orf71A4D174 169 aa6.16□□□□□ -1.42
GGA3-207ENST00000578896 IGHV3-53P01767 116 aa6.16□□□□□ -1.42
GGA3-207ENST00000578896 FGF7P21781 194 aa6.16□□□□□ -1.42
GGA3-207ENST00000578896 RNASE4P34096 147 aaKnown RBP6.16□□□□□ -1.42
GGA3-207ENST00000578896 RAB31Q13636 194 aa6.16□□□□□ -1.42
GGA3-207ENST00000578896 RAB32Q13637 225 aa6.16□□□□□ -1.42
GGA3-207ENST00000578896 C12orf45Q8N5I9 185 aaPredicted RBP6.16□□□□□ -1.42
GGA3-207ENST00000578896 TMEM252Q8N6L7 170 aa6.16□□□□□ -1.42
GGA3-207ENST00000578896 OR1L4Q8NGR5 311 aa6.16□□□□□ -1.42
GGA3-207ENST00000578896 C2orf50Q96LR7 162 aa6.16□□□□□ -1.42
GGA3-207ENST00000578896 AGPAT4-IT1Q9H0P7 198 aa6.16□□□□□ -1.42
GGA3-207ENST00000578896 NUDT15Q9NV35 164 aa6.16□□□□□ -1.42
GGA3-207ENST00000578896 KLF12Q9Y4X4 402 aa6.16□□□□□ -1.42
GGA3-207ENST00000578896 TNFRSF18Q9Y5U5 241 aa6.16□□□□□ -1.42
GGA3-207ENST00000578896 TRBV19A0A075B6N1 114 aa6.15□□□□□ -1.42
GGA3-207ENST00000578896 TRGV2A0A075B6R0 118 aa6.15□□□□□ -1.42
GGA3-207ENST00000578896 IGKV2-40A0A087WW87 121 aaPredicted RBP6.15□□□□□ -1.42
GGA3-207ENST00000578896 TRGV1A0A0A0MS02 117 aa6.15□□□□□ -1.42
GGA3-207ENST00000578896 ZNF324O75467 553 aaPredicted RBP6.15□□□□□ -1.42
GGA3-207ENST00000578896 CDK2AP2O75956 126 aa6.15□□□□□ -1.42
GGA3-207ENST00000578896 IGKV2D-40P01614 121 aaPredicted RBP6.15□□□□□ -1.42
GGA3-207ENST00000578896 RPL29P47914 159 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms