RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 LINC00467Q9BRT7 94 aa9.09□□□□□ -0.95
COPS3-214ENST00000577246 PARD6GQ9BYG4 376 aaPredicted RBP9.09□□□□□ -0.95
COPS3-214ENST00000577246 NPVFQ9HCQ7 196 aa9.09□□□□□ -0.95
COPS3-214ENST00000577246 MSRB1Q9NZV6 116 aa9.09□□□□□ -0.95
COPS3-214ENST00000577246 PRO0255Q9UI72 69 aa9.09□□□□□ -0.95
COPS3-214ENST00000577246 CTDSP2O14595 271 aa9.08□□□□□ -0.96
COPS3-214ENST00000577246 SLC25A5P05141 298 aaKnown RBP9.08□□□□□ -0.96
COPS3-214ENST00000577246 PRB4P10163 310 aaPredicted RBP9.08□□□□□ -0.96
COPS3-214ENST00000577246 TEPPQ6URK8 271 aa9.08□□□□□ -0.96
COPS3-214ENST00000577246 LINC00305Q7Z4B0 112 aa9.08□□□□□ -0.96
COPS3-214ENST00000577246 ZNF546Q86UE3 836 aa9.08□□□□□ -0.96
COPS3-214ENST00000577246 ZNF431Q8TF32 576 aaPredicted RBP9.08□□□□□ -0.96
COPS3-214ENST00000577246 NTN5Q8WTR8 489 aaPredicted RBP9.08□□□□□ -0.96
COPS3-214ENST00000577246 ST6GAL2Q96JF0 529 aa9.08□□□□□ -0.96
COPS3-214ENST00000577246 NAA50Q9GZZ1 169 aaKnown RBP9.08□□□□□ -0.96
COPS3-214ENST00000577246 GSN-AS1Q9NRJ2 163 aa9.08□□□□□ -0.96
COPS3-214ENST00000577246 PSENENQ9NZ42 101 aa9.08□□□□□ -0.96
COPS3-214ENST00000577246 MGAT4CQ9UBM8 478 aa9.08□□□□□ -0.96
COPS3-214ENST00000577246 TNFRSF18Q9Y5U5 241 aa9.08□□□□□ -0.96
COPS3-214ENST00000577246 IGLV5-52A0A0A0MRZ9 124 aa9.07□□□□□ -0.96
COPS3-214ENST00000577246 GOSR2O14653 212 aa9.07□□□□□ -0.96
COPS3-214ENST00000577246 CT45A10P0DMU9 189 aa9.07□□□□□ -0.96
COPS3-214ENST00000577246 AP3S2P59780 193 aa9.07□□□□□ -0.96
COPS3-214ENST00000577246 GUK1Q16774 197 aa9.07□□□□□ -0.96
COPS3-214ENST00000577246 ANXA2RQ3ZCQ2 193 aa9.07□□□□□ -0.96
COPS3-214ENST00000577246 LYPD5Q6UWN5 251 aa9.07□□□□□ -0.96
COPS3-214ENST00000577246 NEGR1Q7Z3B1 354 aa9.07□□□□□ -0.96
COPS3-214ENST00000577246 C10orf126Q8N4M7 172 aa9.07□□□□□ -0.96
COPS3-214ENST00000577246 VPS13BQ7Z7G8 4022 aa9.07□□□□□ -0.96
COPS3-214ENST00000577246 C7orf71A4D174 169 aa9.06□□□□□ -0.96
COPS3-214ENST00000577246 PRAC2D3DTV9 90 aa9.06□□□□□ -0.96
COPS3-214ENST00000577246 COX7A2P2O60397 106 aa9.06□□□□□ -0.96
COPS3-214ENST00000577246 SPINK4O60575 86 aa9.06□□□□□ -0.96
COPS3-214ENST00000577246 SFT2D2O95562 160 aa9.06□□□□□ -0.96
COPS3-214ENST00000577246 HOXB5P09067 269 aa9.06□□□□□ -0.96
COPS3-214ENST00000577246 RRAS2P62070 204 aaPredicted RBP9.06□□□□□ -0.96
COPS3-214ENST00000577246 PATE2Q6UY27 113 aa9.06□□□□□ -0.96
COPS3-214ENST00000577246 EIF4E3Q8N5X7 224 aaKnown RBP9.06□□□□□ -0.96
COPS3-214ENST00000577246 C11orf72Q8NBR9 251 aa9.06□□□□□ -0.96
COPS3-214ENST00000577246 OR10P1Q8NGE3 313 aa9.06□□□□□ -0.96
COPS3-214ENST00000577246 SLC25A21Q9BQT8 299 aaPredicted RBP9.06□□□□□ -0.96
COPS3-214ENST00000577246 CCDC59Q9P031 241 aaKnown RBP9.06□□□□□ -0.96
COPS3-214ENST00000577246 SRRM2Q9UQ35 2752 aaKnown RBP9.05□□□□□ -0.96
COPS3-214ENST00000577246 FLG2Q5D862 2391 aaPredicted RBP9.05□□□□□ -0.96
COPS3-214ENST00000577246 SLC17A3O00476 420 aa9.05□□□□□ -0.96
COPS3-214ENST00000577246 PSCAO43653 123 aa9.05□□□□□ -0.96
COPS3-214ENST00000577246 PLA2G1BP04054 148 aaKnown RBP9.05□□□□□ -0.96
COPS3-214ENST00000577246 SNRPCP09234 159 aaKnown RBP9.05□□□□□ -0.96
COPS3-214ENST00000577246 TCL1AP56279 114 aa9.05□□□□□ -0.96
COPS3-214ENST00000577246 POLR2GP62487 172 aaKnown RBP eCLIP9.05□□□□□ -0.96
COPS3-214ENST00000577246 SLC38A11Q08AI6 406 aa9.05□□□□□ -0.96
COPS3-214ENST00000577246 IBA57Q5T440 356 aaKnown RBP9.05□□□□□ -0.96
COPS3-214ENST00000577246 SYT8Q8NBV8 401 aa9.05□□□□□ -0.96
COPS3-214ENST00000577246 VGLL1Q99990 258 aa9.05□□□□□ -0.96
COPS3-214ENST00000577246 HHLA3Q9XRX5 114 aa9.05□□□□□ -0.96
COPS3-214ENST00000577246 LINC00854A0A1B0GVQ3 168 aa9.04□□□□□ -0.96
COPS3-214ENST00000577246 SSSCA1O60232 199 aa9.04□□□□□ -0.96
COPS3-214ENST00000577246 IGLC2P0DOY2 106 aa9.04□□□□□ -0.96
COPS3-214ENST00000577246 SRIP30626 198 aa9.04□□□□□ -0.96
COPS3-214ENST00000577246 CRYBA4P53673 196 aa9.04□□□□□ -0.96
COPS3-214ENST00000577246 ID3Q02535 119 aa9.04□□□□□ -0.96
COPS3-214ENST00000577246 SERTAD4-AS1Q5TG53 156 aa9.04□□□□□ -0.96
COPS3-214ENST00000577246 C10orf113Q5VZT2 155 aa9.04□□□□□ -0.96
COPS3-214ENST00000577246 PCNPQ8WW12 178 aaKnown RBP9.04□□□□□ -0.96
COPS3-214ENST00000577246 MRPL53Q96EL3 112 aaKnown RBP9.04□□□□□ -0.96
COPS3-214ENST00000577246 SMIM8Q96KF7 97 aa9.04□□□□□ -0.96
COPS3-214ENST00000577246 KRTAP29-1A8MX34 341 aaPredicted RBP9.03□□□□□ -0.96
COPS3-214ENST00000577246 H3BTX0 84 aa9.03□□□□□ -0.96
COPS3-214ENST00000577246 AGPAT2O15120 278 aa9.03□□□□□ -0.96
COPS3-214ENST00000577246 ZNF253O75346 499 aa9.03□□□□□ -0.96
COPS3-214ENST00000577246 MPDU1O75352 247 aa9.03□□□□□ -0.96
COPS3-214ENST00000577246 IGHV3-53P01767 116 aa9.03□□□□□ -0.96
COPS3-214ENST00000577246 METTL15P1P0C7V9 234 aa9.03□□□□□ -0.96
COPS3-214ENST00000577246 HAMPP81172 84 aa9.03□□□□□ -0.96
COPS3-214ENST00000577246 PPP1R1AQ13522 171 aa9.03□□□□□ -0.96
COPS3-214ENST00000577246 MCFD2Q8NI22 146 aa9.03□□□□□ -0.96
COPS3-214ENST00000577246 DEDD2Q8WXF8 326 aa9.03□□□□□ -0.96
COPS3-214ENST00000577246 SAT2Q96F10 170 aaPredicted RBP9.03□□□□□ -0.96
COPS3-214ENST00000577246 LINC00477Q96M19 166 aa9.03□□□□□ -0.96
COPS3-214ENST00000577246 GGACTQ9BVM4 153 aa9.03□□□□□ -0.96
COPS3-214ENST00000577246 KLF12Q9Y4X4 402 aa9.03□□□□□ -0.96
COPS3-214ENST00000577246 TRGV4A0A0C4DH28 118 aa9.02□□□□□ -0.97
COPS3-214ENST00000577246 FABP12A6NFH5 140 aa9.02□□□□□ -0.97
COPS3-214ENST00000577246 KLLNB2CW77 178 aa9.02□□□□□ -0.97
COPS3-214ENST00000577246 RGS13O14921 159 aa9.02□□□□□ -0.97
COPS3-214ENST00000577246 PRAF2O60831 178 aa9.02□□□□□ -0.97
COPS3-214ENST00000577246 ORM1P02763 201 aa9.02□□□□□ -0.97
COPS3-214ENST00000577246 CRYGDP07320 174 aa9.02□□□□□ -0.97
COPS3-214ENST00000577246 OR4E1P0C645 316 aa9.02□□□□□ -0.97
COPS3-214ENST00000577246 UBE2MP61081 183 aaKnown RBP9.02□□□□□ -0.97
COPS3-214ENST00000577246 RAB31Q13636 194 aa9.02□□□□□ -0.97
COPS3-214ENST00000577246 OPCMLQ14982 345 aa9.02□□□□□ -0.97
COPS3-214ENST00000577246 TMEM14EPQ6UXP3 125 aa9.02□□□□□ -0.97
COPS3-214ENST00000577246 Q6ZRG5 221 aa9.02□□□□□ -0.97
COPS3-214ENST00000577246 TOMM5Q8N4H5 51 aa9.02□□□□□ -0.97
COPS3-214ENST00000577246 DEFB104AQ8WTQ1 72 aa9.02□□□□□ -0.97
COPS3-214ENST00000577246 C8orf49Q96NF6 230 aa9.02□□□□□ -0.97
COPS3-214ENST00000577246 ARPC5LQ9BPX5 153 aa9.02□□□□□ -0.97
COPS3-214ENST00000577246 TXNDC17Q9BRA2 123 aa9.02□□□□□ -0.97
COPS3-214ENST00000577246 MRPL32Q9BYC8 188 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms