RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 GDF5OSQ5U4N7 250 aa10.31□□□□□ -0.76
RPAIN-217ENST00000575711 TRPT1Q86TN4 253 aaKnown RBP10.31□□□□□ -0.76
RPAIN-217ENST00000575711 SBSPONQ8IVN8 264 aa10.31□□□□□ -0.76
RPAIN-217ENST00000575711 KIR2DL5AQ8N109 375 aa10.31□□□□□ -0.76
RPAIN-217ENST00000575711 LYPD1Q8N2G4 141 aa10.31□□□□□ -0.76
RPAIN-217ENST00000575711 EXOC3-AS1Q8N2X6 119 aa10.31□□□□□ -0.76
RPAIN-217ENST00000575711 KIR2DL5BQ8NHK3 375 aa10.31□□□□□ -0.76
RPAIN-217ENST00000575711 RPUSD4Q96CM3 377 aaKnown RBP10.31□□□□□ -0.76
RPAIN-217ENST00000575711 ASCL2Q99929 193 aa10.31□□□□□ -0.76
RPAIN-217ENST00000575711 MAP1LC3BQ9GZQ8 125 aa10.31□□□□□ -0.76
RPAIN-217ENST00000575711 TMEM167BQ9NRX6 74 aa10.31□□□□□ -0.76
RPAIN-217ENST00000575711 A0A0J9YX75 114 aa10.3□□□□□ -0.76
RPAIN-217ENST00000575711 BOLA2-SMG1P6H3BVE0 249 aa10.3□□□□□ -0.76
RPAIN-217ENST00000575711 DUSP14O95147 198 aaKnown RBP10.3□□□□□ -0.76
RPAIN-217ENST00000575711 FGF8P55075 233 aaPredicted RBP10.3□□□□□ -0.76
RPAIN-217ENST00000575711 ICAM4Q14773 271 aa10.3□□□□□ -0.76
RPAIN-217ENST00000575711 OR4B1Q8NGF8 309 aa10.3□□□□□ -0.76
RPAIN-217ENST00000575711 CSTL1Q9H114 145 aa10.3□□□□□ -0.76
RPAIN-217ENST00000575711 Q9H3A6 140 aa10.3□□□□□ -0.76
RPAIN-217ENST00000575711 ZNF705FA8MVS1 300 aaPredicted RBP10.29□□□□□ -0.76
RPAIN-217ENST00000575711 M0R3E3 92 aa10.29□□□□□ -0.76
RPAIN-217ENST00000575711 UBE2CO00762 179 aa10.29□□□□□ -0.76
RPAIN-217ENST00000575711 IGKV3-20P01619 116 aa10.29□□□□□ -0.76
RPAIN-217ENST00000575711 SULT1A2P50226 295 aa10.29□□□□□ -0.76
RPAIN-217ENST00000575711 NUTF2P61970 127 aaKnown RBP10.29□□□□□ -0.76
RPAIN-217ENST00000575711 FAM74A1Q5RGS3 127 aa10.29□□□□□ -0.76
RPAIN-217ENST00000575711 MORN3Q6PF18 240 aaPredicted RBP10.29□□□□□ -0.76
RPAIN-217ENST00000575711 OR8A1Q8NGG7 326 aa10.29□□□□□ -0.76
RPAIN-217ENST00000575711 SUN5Q8TC36 379 aa10.29□□□□□ -0.76
RPAIN-217ENST00000575711 H2AFB1P0C5Y9 115 aa10.28□□□□□ -0.76
RPAIN-217ENST00000575711 CSN1S1P47710 185 aa10.28□□□□□ -0.76
RPAIN-217ENST00000575711 CNN1P51911 297 aaKnown RBP10.28□□□□□ -0.76
RPAIN-217ENST00000575711 HIST1H1AQ02539 215 aaPredicted RBP10.28□□□□□ -0.76
RPAIN-217ENST00000575711 OR10J6PQ8NGY7 276 aa10.28□□□□□ -0.76
RPAIN-217ENST00000575711 SFT2D1Q8WV19 159 aa10.28□□□□□ -0.76
RPAIN-217ENST00000575711 MBD3L1Q8WWY6 194 aa10.28□□□□□ -0.76
RPAIN-217ENST00000575711 CLUHP3Q96NS8 147 aa10.28□□□□□ -0.76
RPAIN-217ENST00000575711 OTORQ9NRC9 128 aa10.28□□□□□ -0.76
RPAIN-217ENST00000575711 PRKDCP78527 4128 aaKnown RBP10.27□□□□□ -0.77
RPAIN-217ENST00000575711 PRAC2D3DTV9 90 aa10.27□□□□□ -0.77
RPAIN-217ENST00000575711 CA1P00915 261 aaPredicted RBP10.27□□□□□ -0.77
RPAIN-217ENST00000575711 NHLRC4P0CG21 123 aaPredicted RBP10.27□□□□□ -0.77
RPAIN-217ENST00000575711 ZNF705DP0CH99 300 aaPredicted RBP10.27□□□□□ -0.77
RPAIN-217ENST00000575711 ZNF705BP0CI00 300 aaPredicted RBP10.27□□□□□ -0.77
RPAIN-217ENST00000575711 PRB4P10163 310 aaPredicted RBP10.27□□□□□ -0.77
RPAIN-217ENST00000575711 ALKAL2Q6UX46 152 aa10.27□□□□□ -0.77
RPAIN-217ENST00000575711 CMTM2Q8TAZ6 248 aa10.27□□□□□ -0.77
RPAIN-217ENST00000575711 SPATA25Q9BR10 227 aa10.27□□□□□ -0.77
RPAIN-217ENST00000575711 ZMAT4Q9H898 229 aa10.27□□□□□ -0.77
RPAIN-217ENST00000575711 PGPA6NDG6 321 aa10.26□□□□□ -0.77
RPAIN-217ENST00000575711 Q6ZWC4 215 aa10.26□□□□□ -0.77
RPAIN-217ENST00000575711 RXFP4Q8TDU9 374 aa10.26□□□□□ -0.77
RPAIN-217ENST00000575711 TM2D3Q9BRN9 247 aa10.26□□□□□ -0.77
RPAIN-217ENST00000575711 TMPRSS5Q9H3S3 457 aa10.26□□□□□ -0.77
RPAIN-217ENST00000575711 PPP1R14DQ9NXH3 145 aa10.26□□□□□ -0.77
RPAIN-217ENST00000575711 A0A1B0GV50 99 aa10.25□□□□□ -0.77
RPAIN-217ENST00000575711 A0A1W2PRE2 83 aa10.25□□□□□ -0.77
RPAIN-217ENST00000575711 A8MTW9 85 aa10.25□□□□□ -0.77
RPAIN-217ENST00000575711 ZNF705EA8MWA4 302 aaPredicted RBP10.25□□□□□ -0.77
RPAIN-217ENST00000575711 TEX46H3BTG2 121 aa10.25□□□□□ -0.77
RPAIN-217ENST00000575711 C1QTNF4Q9BXJ3 329 aa10.25□□□□□ -0.77
RPAIN-217ENST00000575711 IGKV2-40A0A087WW87 121 aaPredicted RBP10.24□□□□□ -0.77
RPAIN-217ENST00000575711 NPIPB6E9PJ23 425 aa10.24□□□□□ -0.77
RPAIN-217ENST00000575711 IGKV2D-40P01614 121 aaPredicted RBP10.24□□□□□ -0.77
RPAIN-217ENST00000575711 HBE1P02100 147 aa10.24□□□□□ -0.77
RPAIN-217ENST00000575711 SLC25A5P05141 298 aaKnown RBP10.24□□□□□ -0.77
RPAIN-217ENST00000575711 FXYD7P58549 80 aa10.24□□□□□ -0.77
RPAIN-217ENST00000575711 UBE2G2P60604 165 aa10.24□□□□□ -0.77
RPAIN-217ENST00000575711 DEFB135Q30KP9 77 aa10.24□□□□□ -0.77
RPAIN-217ENST00000575711 RCHY1Q96PM5 261 aa10.24□□□□□ -0.77
RPAIN-217ENST00000575711 SLC35B3Q9H1N7 401 aa10.24□□□□□ -0.77
RPAIN-217ENST00000575711 RPH3ALQ9UNE2 315 aa10.24□□□□□ -0.77
RPAIN-217ENST00000575711 TRAV1-1A0A0B4J248 108 aa10.23□□□□□ -0.77
RPAIN-217ENST00000575711 FAM74A7A6NL05 159 aa10.23□□□□□ -0.77
RPAIN-217ENST00000575711 GGTLC3B5MD39 225 aa10.23□□□□□ -0.77
RPAIN-217ENST00000575711 DIRC3C9JPN6 131 aa10.23□□□□□ -0.77
RPAIN-217ENST00000575711 PPT1P50897 306 aa10.23□□□□□ -0.77
RPAIN-217ENST00000575711 SUMO1P63165 101 aaKnown RBP10.23□□□□□ -0.77
RPAIN-217ENST00000575711 AMTNQ6UX39 209 aa10.23□□□□□ -0.77
RPAIN-217ENST00000575711 ARL6IP6Q8N6S5 226 aa10.23□□□□□ -0.77
RPAIN-217ENST00000575711 C5orf17Q8NAS9 161 aa10.23□□□□□ -0.77
RPAIN-217ENST00000575711 LINC00477Q96M19 166 aa10.23□□□□□ -0.77
RPAIN-217ENST00000575711 NKX6-2Q9C056 277 aaPredicted RBP10.23□□□□□ -0.77
RPAIN-217ENST00000575711 RETNQ9HD89 108 aa10.23□□□□□ -0.77
RPAIN-217ENST00000575711 XCL2Q9UBD3 114 aa10.23□□□□□ -0.77
RPAIN-217ENST00000575711 TP53TG1Q9Y2A0 90 aa10.23□□□□□ -0.77
RPAIN-217ENST00000575711 YTHDF2Q9Y5A9 579 aaKnown RBP10.23□□□□□ -0.77
RPAIN-217ENST00000575711 RBAKDNA6NC62 111 aa10.22□□□□□ -0.77
RPAIN-217ENST00000575711 SPRY2O43597 315 aa10.22□□□□□ -0.77
RPAIN-217ENST00000575711 AMBPP02760 352 aa10.22□□□□□ -0.77
RPAIN-217ENST00000575711 GIG44P09565 113 aaPredicted RBP10.22□□□□□ -0.77
RPAIN-217ENST00000575711 ERCC8Q13216 396 aa10.22□□□□□ -0.77
RPAIN-217ENST00000575711 SPINK13Q1W4C9 94 aa10.22□□□□□ -0.77
RPAIN-217ENST00000575711 TMEM78Q5T7P6 136 aa10.22□□□□□ -0.77
RPAIN-217ENST00000575711 C9orf47Q6ZRZ4 202 aa10.22□□□□□ -0.77
RPAIN-217ENST00000575711 RNF183Q96D59 192 aa10.22□□□□□ -0.77
RPAIN-217ENST00000575711 ARL2-SNX15V9GYD0 113 aa10.22□□□□□ -0.77
RPAIN-217ENST00000575711 SERTM2A0A1B0GWG4 89 aa10.21□□□□□ -0.77
RPAIN-217ENST00000575711 M0R2Z0 102 aa10.21□□□□□ -0.77
RPAIN-217ENST00000575711 IFNA7P01567 189 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms