RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 NPCDR1Q9BY65 106 aa13.99□□□□□ -0.17
SCARF1-208ENST00000574545 PLAC8L1A1L4L8 177 aa13.98□□□□□ -0.17
SCARF1-208ENST00000574545 AZU1P20160 251 aa13.98□□□□□ -0.17
SCARF1-208ENST00000574545 TSPOP30536 169 aa13.98□□□□□ -0.17
SCARF1-208ENST00000574545 GUK1Q16774 197 aa13.98□□□□□ -0.17
SCARF1-208ENST00000574545 LRRC37A5PQ49AS3 106 aa13.98□□□□□ -0.17
SCARF1-208ENST00000574545 SLC25A31Q9H0C2 315 aa13.98□□□□□ -0.17
SCARF1-208ENST00000574545 ZNF253O75346 499 aa13.97□□□□□ -0.17
SCARF1-208ENST00000574545 CDKN1BP46527 198 aa13.97□□□□□ -0.17
SCARF1-208ENST00000574545 KIR3DS1Q14943 382 aa13.97□□□□□ -0.17
SCARF1-208ENST00000574545 GCSAMLQ5JQS6 135 aa13.97□□□□□ -0.17
SCARF1-208ENST00000574545 PPP1R1CQ8WVI7 109 aa13.97□□□□□ -0.17
SCARF1-208ENST00000574545 NDUFAF3Q9BU61 184 aa13.97□□□□□ -0.17
SCARF1-208ENST00000574545 TMEM14CQ9P0S9 112 aa13.97□□□□□ -0.17
SCARF1-208ENST00000574545 DEFA1P59665 94 aa13.96□□□□□ -0.17
SCARF1-208ENST00000574545 DEFA3P59666 94 aa13.96□□□□□ -0.17
SCARF1-208ENST00000574545 FAM210BQ96KR6 192 aa13.96□□□□□ -0.17
SCARF1-208ENST00000574545 TRBV19A0A075B6N1 114 aa13.95□□□□□ -0.18
SCARF1-208ENST00000574545 NDUFB4O95168 129 aa13.95□□□□□ -0.18
SCARF1-208ENST00000574545 TMEM256Q8N2U0 113 aa13.95□□□□□ -0.18
SCARF1-208ENST00000574545 THAP6Q8TBB0 222 aa13.95□□□□□ -0.18
SCARF1-208ENST00000574545 LINC01587Q99440 93 aa13.95□□□□□ -0.18
SCARF1-208ENST00000574545 WDR61Q9GZS3 305 aaKnown RBP13.95□□□□□ -0.18
SCARF1-208ENST00000574545 PPP1R14DQ9NXH3 145 aa13.95□□□□□ -0.18
SCARF1-208ENST00000574545 LYRM9A8MSI8 78 aa13.94□□□□□ -0.18
SCARF1-208ENST00000574545 MPC2O95563 127 aa13.94□□□□□ -0.18
SCARF1-208ENST00000574545 HIST1H1EP10412 219 aaKnown RBP13.94□□□□□ -0.18
SCARF1-208ENST00000574545 TAS2R60P59551 318 aa13.94□□□□□ -0.18
SCARF1-208ENST00000574545 FAM167A-AS1Q96KT0 104 aa13.94□□□□□ -0.18
SCARF1-208ENST00000574545 PARD6GQ9BYG4 376 aaPredicted RBP13.94□□□□□ -0.18
SCARF1-208ENST00000574545 CT45A10P0DMU9 189 aa13.93□□□□□ -0.18
SCARF1-208ENST00000574545 DAD1P61803 113 aa13.93□□□□□ -0.18
SCARF1-208ENST00000574545 CLINT1Q14677 625 aa13.93□□□□□ -0.18
SCARF1-208ENST00000574545 OR10J6PQ8NGY7 276 aa13.93□□□□□ -0.18
SCARF1-208ENST00000574545 MRPL53Q96EL3 112 aaKnown RBP13.93□□□□□ -0.18
SCARF1-208ENST00000574545 SLC25A2Q9BXI2 301 aa13.93□□□□□ -0.18
SCARF1-208ENST00000574545 NPIPB6E9PJ23 425 aa13.92□□□□□ -0.18
SCARF1-208ENST00000574545 SSNA1O43805 119 aa13.92□□□□□ -0.18
SCARF1-208ENST00000574545 PYYP10082 97 aa13.92□□□□□ -0.18
SCARF1-208ENST00000574545 PDE6HQ13956 83 aa13.92□□□□□ -0.18
SCARF1-208ENST00000574545 ODF3Q96PU9 254 aa13.92□□□□□ -0.18
SCARF1-208ENST00000574545 C20orf144Q9BQM9 153 aa13.92□□□□□ -0.18
SCARF1-208ENST00000574545 H7BYZ3 331 aa13.91□□□□□ -0.18
SCARF1-208ENST00000574545 M0R3E3 92 aa13.91□□□□□ -0.18
SCARF1-208ENST00000574545 P0DMU3 169 aa13.91□□□□□ -0.18
SCARF1-208ENST00000574545 FAM231AP0DMU4 169 aa13.91□□□□□ -0.18
SCARF1-208ENST00000574545 FAM231CP0DMU5 169 aa13.91□□□□□ -0.18
SCARF1-208ENST00000574545 GFI1BQ5VTD9 330 aa13.91□□□□□ -0.18
SCARF1-208ENST00000574545 MIR17HGQ75NE6 70 aa13.91□□□□□ -0.18
SCARF1-208ENST00000574545 POM121L12Q8N7R1 296 aa13.91□□□□□ -0.18
SCARF1-208ENST00000574545 FCN2Q15485 313 aa13.9□□□□□ -0.18
SCARF1-208ENST00000574545 RNASE8Q8TDE3 154 aaKnown RBP13.9□□□□□ -0.18
SCARF1-208ENST00000574545 HSPB11Q9Y547 144 aa13.9□□□□□ -0.18
SCARF1-208ENST00000574545 DYNC1H1Q14204 4646 aaKnown RBP13.9□□□□□ -0.18
SCARF1-208ENST00000574545 HTN3P15516 51 aa13.89□□□□□ -0.19
SCARF1-208ENST00000574545 ZNF493Q6ZR52 646 aa13.89□□□□□ -0.19
SCARF1-208ENST00000574545 C16orf74Q96GX8 76 aa13.89□□□□□ -0.19
SCARF1-208ENST00000574545 ATP5SQ99766 215 aa13.89□□□□□ -0.19
SCARF1-208ENST00000574545 PRELID1Q9Y255 219 aa13.89□□□□□ -0.19
SCARF1-208ENST00000574545 DNAH11Q96DT5 4516 aa13.89□□□□□ -0.19
SCARF1-208ENST00000574545 HTN1P15515 57 aa13.88□□□□□ -0.19
SCARF1-208ENST00000574545 RPL12P30050 165 aaKnown RBP13.88□□□□□ -0.19
SCARF1-208ENST00000574545 TMEM88Q6PEY1 159 aa13.88□□□□□ -0.19
SCARF1-208ENST00000574545 TMEM263Q8WUH6 116 aaKnown RBP13.88□□□□□ -0.19
SCARF1-208ENST00000574545 FAM19A4Q96LR4 140 aa13.88□□□□□ -0.19
SCARF1-208ENST00000574545 NBEAP1P0C6P0 100 aa13.87□□□□□ -0.19
SCARF1-208ENST00000574545 PET100P0DJ07 73 aa13.87□□□□□ -0.19
SCARF1-208ENST00000574545 DEFB130BP0DP73 79 aa13.87□□□□□ -0.19
SCARF1-208ENST00000574545 DEFB130AP0DP74 79 aa13.87□□□□□ -0.19
SCARF1-208ENST00000574545 ERCC8Q13216 396 aa13.87□□□□□ -0.19
SCARF1-208ENST00000574545 EXOC3-AS1Q8N2X6 119 aa13.87□□□□□ -0.19
SCARF1-208ENST00000574545 BLNKQ8WV28 456 aa13.87□□□□□ -0.19
SCARF1-208ENST00000574545 FXYD5Q96DB9 178 aa13.87□□□□□ -0.19
SCARF1-208ENST00000574545 MRPL32Q9BYC8 188 aaKnown RBP13.87□□□□□ -0.19
SCARF1-208ENST00000574545 AGPAT4-IT1Q9H0P7 198 aa13.87□□□□□ -0.19
SCARF1-208ENST00000574545 OR51M1Q9H341 326 aa13.87□□□□□ -0.19
SCARF1-208ENST00000574545 KCNIP2Q9NS61 270 aa13.87□□□□□ -0.19
SCARF1-208ENST00000574545 MBD2Q9UBB5 411 aa13.87□□□□□ -0.19
SCARF1-208ENST00000574545 FUT9Q9Y231 359 aa13.87□□□□□ -0.19
SCARF1-208ENST00000574545 TIMM9Q9Y5J7 89 aa13.87□□□□□ -0.19
SCARF1-208ENST00000574545 TIMM8BQ9Y5J9 83 aaPredicted RBP13.87□□□□□ -0.19
SCARF1-208ENST00000574545 C17orf112F2Z3M2 114 aa13.86□□□□□ -0.19
SCARF1-208ENST00000574545 LEPP41159 167 aa13.86□□□□□ -0.19
SCARF1-208ENST00000574545 LINC00612Q8N6U2 182 aa13.86□□□□□ -0.19
SCARF1-208ENST00000574545 ZNF503Q96F45 646 aa13.86□□□□□ -0.19
SCARF1-208ENST00000574545 LINC00477Q96M19 166 aa13.86□□□□□ -0.19
SCARF1-208ENST00000574545 WFDC1Q9HC57 220 aa13.86□□□□□ -0.19
SCARF1-208ENST00000574545 ALG5Q9Y673 324 aa13.86□□□□□ -0.19
SCARF1-208ENST00000574545 PKD1P98161 4303 aa13.86□□□□□ -0.19
SCARF1-208ENST00000574545 CBY3A6NI87 242 aa13.85□□□□□ -0.19
SCARF1-208ENST00000574545 C9orf47Q6ZRZ4 202 aa13.85□□□□□ -0.19
SCARF1-208ENST00000574545 RNF141Q8WVD5 230 aa13.85□□□□□ -0.19
SCARF1-208ENST00000574545 NOP10Q9NPE3 64 aaKnown RBP13.85□□□□□ -0.19
SCARF1-208ENST00000574545 TRAV12-3A0A0B4J271 114 aa13.84□□□□□ -0.19
SCARF1-208ENST00000574545 KLLNB2CW77 178 aa13.84□□□□□ -0.19
SCARF1-208ENST00000574545 J3KRW8 73 aa13.84□□□□□ -0.19
SCARF1-208ENST00000574545 ICAM4Q14773 271 aa13.84□□□□□ -0.19
SCARF1-208ENST00000574545 PAXXQ9BUH6 204 aa13.84□□□□□ -0.19
SCARF1-208ENST00000574545 SMIM3Q9BZL3 60 aa13.84□□□□□ -0.19
SCARF1-208ENST00000574545 ZNF324O75467 553 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms