RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 RPL35AP18077 110 aaKnown RBP11.56□□□□□ -0.56
CCNE1-204ENST00000574121 HLA-DMBP28068 263 aa11.56□□□□□ -0.56
CCNE1-204ENST00000574121 GDF5OSQ5U4N7 250 aa11.56□□□□□ -0.56
CCNE1-204ENST00000574121 Q6ZWC4 215 aa11.56□□□□□ -0.56
CCNE1-204ENST00000574121 SSX7Q7RTT5 188 aa11.56□□□□□ -0.56
CCNE1-204ENST00000574121 TM2D3Q9BRN9 247 aa11.56□□□□□ -0.56
CCNE1-204ENST00000574121 PLA2G2EQ9NZK7 142 aa11.56□□□□□ -0.56
CCNE1-204ENST00000574121 MAP1LC3B2A6NCE7 125 aa11.55□□□□□ -0.56
CCNE1-204ENST00000574121 EIF3GO75821 320 aaKnown RBP eCLIP11.55□□□□□ -0.56
CCNE1-204ENST00000574121 RANP62826 216 aaKnown RBP11.55□□□□□ -0.56
CCNE1-204ENST00000574121 ICAM4Q14773 271 aa11.55□□□□□ -0.56
CCNE1-204ENST00000574121 FAM74A1Q5RGS3 127 aa11.55□□□□□ -0.56
CCNE1-204ENST00000574121 ARL6IP6Q8N6S5 226 aa11.55□□□□□ -0.56
CCNE1-204ENST00000574121 OR8A1Q8NGG7 326 aa11.55□□□□□ -0.56
CCNE1-204ENST00000574121 MBD3L1Q8WWY6 194 aa11.55□□□□□ -0.56
CCNE1-204ENST00000574121 SPATA25Q9BR10 227 aa11.55□□□□□ -0.56
CCNE1-204ENST00000574121 MAP1LC3BQ9GZQ8 125 aa11.55□□□□□ -0.56
CCNE1-204ENST00000574121 OTORQ9NRC9 128 aa11.55□□□□□ -0.56
CCNE1-204ENST00000574121 F6UB75 175 aa11.54□□□□□ -0.56
CCNE1-204ENST00000574121 FHITP49789 147 aa11.54□□□□□ -0.56
CCNE1-204ENST00000574121 SULT1A2P50226 295 aa11.54□□□□□ -0.56
CCNE1-204ENST00000574121 CNN1P51911 297 aaKnown RBP11.54□□□□□ -0.56
CCNE1-204ENST00000574121 DEFB1P60022 68 aa11.54□□□□□ -0.56
CCNE1-204ENST00000574121 EXOC3-AS1Q8N2X6 119 aa11.54□□□□□ -0.56
CCNE1-204ENST00000574121 OR10J6PQ8NGY7 276 aa11.54□□□□□ -0.56
CCNE1-204ENST00000574121 FAM213BQ8TBF2 198 aa11.54□□□□□ -0.56
CCNE1-204ENST00000574121 RXFP4Q8TDU9 374 aa11.54□□□□□ -0.56
CCNE1-204ENST00000574121 ASCL2Q99929 193 aa11.54□□□□□ -0.56
CCNE1-204ENST00000574121 C1QTNF4Q9BXJ3 329 aa11.54□□□□□ -0.56
CCNE1-204ENST00000574121 Q9H3A6 140 aa11.54□□□□□ -0.56
CCNE1-204ENST00000574121 ZMAT4Q9H898 229 aa11.54□□□□□ -0.56
CCNE1-204ENST00000574121 TP53TG1Q9Y2A0 90 aa11.54□□□□□ -0.56
CCNE1-204ENST00000574121 M0R3E3 92 aa11.53□□□□□ -0.56
CCNE1-204ENST00000574121 CA1P00915 261 aaPredicted RBP11.53□□□□□ -0.56
CCNE1-204ENST00000574121 CSN1S1P47710 185 aa11.53□□□□□ -0.56
CCNE1-204ENST00000574121 OR4B1Q8NGF8 309 aa11.53□□□□□ -0.56
CCNE1-204ENST00000574121 A0A1W2PRE2 83 aa11.52□□□□□ -0.57
CCNE1-204ENST00000574121 ZNF705FA8MVS1 300 aaPredicted RBP11.52□□□□□ -0.57
CCNE1-204ENST00000574121 H2AFB1P0C5Y9 115 aa11.52□□□□□ -0.57
CCNE1-204ENST00000574121 HIST1H1AQ02539 215 aaPredicted RBP11.52□□□□□ -0.57
CCNE1-204ENST00000574121 SFT2D1Q8WV19 159 aa11.52□□□□□ -0.57
CCNE1-204ENST00000574121 TRAV1-1A0A0B4J248 108 aa11.51□□□□□ -0.57
CCNE1-204ENST00000574121 PRAC2D3DTV9 90 aa11.51□□□□□ -0.57
CCNE1-204ENST00000574121 NPIPB6E9PJ23 425 aa11.51□□□□□ -0.57
CCNE1-204ENST00000574121 AMBPP02760 352 aa11.51□□□□□ -0.57
CCNE1-204ENST00000574121 AMTNQ6UX39 209 aa11.51□□□□□ -0.57
CCNE1-204ENST00000574121 IQCF2Q8IXL9 164 aa11.51□□□□□ -0.57
CCNE1-204ENST00000574121 CMTM2Q8TAZ6 248 aa11.51□□□□□ -0.57
CCNE1-204ENST00000574121 NKX6-2Q9C056 277 aaPredicted RBP11.51□□□□□ -0.57
CCNE1-204ENST00000574121 BOLA1Q9Y3E2 137 aa11.51□□□□□ -0.57
CCNE1-204ENST00000574121 ARL2-SNX15V9GYD0 113 aa11.51□□□□□ -0.57
CCNE1-204ENST00000574121 RBAKDNA6NC62 111 aa11.5□□□□□ -0.57
CCNE1-204ENST00000574121 PGPA6NDG6 321 aa11.5□□□□□ -0.57
CCNE1-204ENST00000574121 TEX46H3BTG2 121 aa11.5□□□□□ -0.57
CCNE1-204ENST00000574121 IGKV3-20P01619 116 aa11.5□□□□□ -0.57
CCNE1-204ENST00000574121 GIG44P09565 113 aaPredicted RBP11.5□□□□□ -0.57
CCNE1-204ENST00000574121 ZNF705DP0CH99 300 aaPredicted RBP11.5□□□□□ -0.57
CCNE1-204ENST00000574121 ZNF705BP0CI00 300 aaPredicted RBP11.5□□□□□ -0.57
CCNE1-204ENST00000574121 FGF8P55075 233 aaPredicted RBP11.5□□□□□ -0.57
CCNE1-204ENST00000574121 C5orf17Q8NAS9 161 aa11.5□□□□□ -0.57
CCNE1-204ENST00000574121 RNF183Q96D59 192 aa11.5□□□□□ -0.57
CCNE1-204ENST00000574121 ODF3Q96PU9 254 aa11.5□□□□□ -0.57
CCNE1-204ENST00000574121 SERTM2A0A1B0GWG4 89 aa11.49□□□□□ -0.57
CCNE1-204ENST00000574121 BOLA2-SMG1P6H3BVE0 249 aa11.49□□□□□ -0.57
CCNE1-204ENST00000574121 HBE1P02100 147 aa11.49□□□□□ -0.57
CCNE1-204ENST00000574121 SLC25A5P05141 298 aaKnown RBP11.49□□□□□ -0.57
CCNE1-204ENST00000574121 PPT1P50897 306 aa11.49□□□□□ -0.57
CCNE1-204ENST00000574121 DEFB135Q30KP9 77 aa11.49□□□□□ -0.57
CCNE1-204ENST00000574121 C9orf47Q6ZRZ4 202 aa11.49□□□□□ -0.57
CCNE1-204ENST00000574121 LINC00477Q96M19 166 aa11.49□□□□□ -0.57
CCNE1-204ENST00000574121 RCHY1Q96PM5 261 aa11.49□□□□□ -0.57
CCNE1-204ENST00000574121 TMPRSS5Q9H3S3 457 aa11.49□□□□□ -0.57
CCNE1-204ENST00000574121 PPP1R14DQ9NXH3 145 aa11.49□□□□□ -0.57
CCNE1-204ENST00000574121 DIRC3C9JPN6 131 aa11.48□□□□□ -0.57
CCNE1-204ENST00000574121 SPRY2O43597 315 aa11.48□□□□□ -0.57
CCNE1-204ENST00000574121 TSPOP30536 169 aa11.48□□□□□ -0.57
CCNE1-204ENST00000574121 ALKAL2Q6UX46 152 aa11.48□□□□□ -0.57
CCNE1-204ENST00000574121 OVOL2Q9BRP0 275 aa11.48□□□□□ -0.57
CCNE1-204ENST00000574121 TCEAL7Q9BRU2 100 aa11.48□□□□□ -0.57
CCNE1-204ENST00000574121 SLC35B3Q9H1N7 401 aa11.48□□□□□ -0.57
CCNE1-204ENST00000574121 AGRNO00468 2067 aa11.47□□□□□ -0.57
CCNE1-204ENST00000574121 TRBV7-9A0A0J9YWB2 115 aa11.47□□□□□ -0.57
CCNE1-204ENST00000574121 FAM74A7A6NL05 159 aa11.47□□□□□ -0.57
CCNE1-204ENST00000574121 GGTLC3B5MD39 225 aa11.47□□□□□ -0.57
CCNE1-204ENST00000574121 SUMO1P63165 101 aaKnown RBP11.47□□□□□ -0.57
CCNE1-204ENST00000574121 TMEM78Q5T7P6 136 aa11.47□□□□□ -0.57
CCNE1-204ENST00000574121 CSNK1G2-AS1Q8NCQ2 148 aa11.47□□□□□ -0.57
CCNE1-204ENST00000574121 XCL2Q9UBD3 114 aa11.47□□□□□ -0.57
CCNE1-204ENST00000574121 U3KQK5 164 aa11.47□□□□□ -0.57
CCNE1-204ENST00000574121 IGKV2-40A0A087WW87 121 aaPredicted RBP11.46□□□□□ -0.57
CCNE1-204ENST00000574121 ZNF705EA8MWA4 302 aaPredicted RBP11.46□□□□□ -0.57
CCNE1-204ENST00000574121 IGKV2D-40P01614 121 aaPredicted RBP11.46□□□□□ -0.57
CCNE1-204ENST00000574121 NMBP08949 121 aa11.46□□□□□ -0.57
CCNE1-204ENST00000574121 CDKN1BP46527 198 aa11.46□□□□□ -0.57
CCNE1-204ENST00000574121 IGF2BP2-AS1Q96M15 143 aa11.46□□□□□ -0.57
CCNE1-204ENST00000574121 AGPAT4-IT1Q9H0P7 198 aa11.46□□□□□ -0.57
CCNE1-204ENST00000574121 EPDR1Q9UM22 224 aa11.46□□□□□ -0.57
CCNE1-204ENST00000574121 YTHDF2Q9Y5A9 579 aaKnown RBP11.46□□□□□ -0.57
CCNE1-204ENST00000574121 LENEPQ9Y5L5 61 aa11.46□□□□□ -0.57
CCNE1-204ENST00000574121 K7EQM0 130 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms