RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 CNN1P51911 297 aaKnown RBP9.34□□□□□ -0.91
TRAPPC1-206ENST00000573989 FAM74A1Q5RGS3 127 aa9.34□□□□□ -0.91
TRAPPC1-206ENST00000573989 TMUB2Q71RG4 321 aa9.34□□□□□ -0.91
TRAPPC1-206ENST00000573989 RPP25LQ8N5L8 163 aaKnown RBP9.34□□□□□ -0.91
TRAPPC1-206ENST00000573989 FXYD5Q96DB9 178 aa9.34□□□□□ -0.91
TRAPPC1-206ENST00000573989 CYTL1Q9NRR1 136 aa9.34□□□□□ -0.91
TRAPPC1-206ENST00000573989 A8MTW9 85 aa9.33□□□□□ -0.92
TRAPPC1-206ENST00000573989 ZNF705FA8MVS1 300 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC1-206ENST00000573989 CXorf1O96002 111 aa9.33□□□□□ -0.92
TRAPPC1-206ENST00000573989 CSN1S1P47710 185 aa9.33□□□□□ -0.92
TRAPPC1-206ENST00000573989 OR11H2Q8NH07 326 aa9.33□□□□□ -0.92
TRAPPC1-206ENST00000573989 RAB24Q969Q5 203 aa9.33□□□□□ -0.92
TRAPPC1-206ENST00000573989 XCL2Q9UBD3 114 aa9.33□□□□□ -0.92
TRAPPC1-206ENST00000573989 CTXND1A0A1B0GTU2 59 aa9.32□□□□□ -0.92
TRAPPC1-206ENST00000573989 NDUFB4O95168 129 aa9.32□□□□□ -0.92
TRAPPC1-206ENST00000573989 GIG44P09565 113 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC1-206ENST00000573989 SEC11BP0C7V7 166 aa9.32□□□□□ -0.92
TRAPPC1-206ENST00000573989 ZNF705DP0CH99 300 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC1-206ENST00000573989 ZNF705BP0CI00 300 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC1-206ENST00000573989 STAG3L2P0CL84 134 aa9.32□□□□□ -0.92
TRAPPC1-206ENST00000573989 STAG3L3P0CL85 134 aa9.32□□□□□ -0.92
TRAPPC1-206ENST00000573989 ARL14EPLP0DKL9 152 aa9.32□□□□□ -0.92
TRAPPC1-206ENST00000573989 TPT1P13693 172 aaKnown RBP9.32□□□□□ -0.92
TRAPPC1-206ENST00000573989 RANP62826 216 aaKnown RBP9.32□□□□□ -0.92
TRAPPC1-206ENST00000573989 ICAM4Q14773 271 aa9.32□□□□□ -0.92
TRAPPC1-206ENST00000573989 EXOC3-AS1Q8N2X6 119 aa9.32□□□□□ -0.92
TRAPPC1-206ENST00000573989 IL17DQ8TAD2 202 aa9.32□□□□□ -0.92
TRAPPC1-206ENST00000573989 ZNF503Q96F45 646 aa9.32□□□□□ -0.92
TRAPPC1-206ENST00000573989 SLC35B3Q9H1N7 401 aa9.32□□□□□ -0.92
TRAPPC1-206ENST00000573989 STAB2Q8WWQ8 2551 aa9.32□□□□□ -0.92
TRAPPC1-206ENST00000573989 TENM3Q9P273 2699 aa9.32□□□□□ -0.92
TRAPPC1-206ENST00000573989 HUWE1Q7Z6Z7 4374 aaKnown RBP9.32□□□□□ -0.92
TRAPPC1-206ENST00000573989 UMAD1C9J7I0 102 aa9.31□□□□□ -0.92
TRAPPC1-206ENST00000573989 BOLA2-SMG1P6H3BVE0 249 aa9.31□□□□□ -0.92
TRAPPC1-206ENST00000573989 HMGB3O15347 200 aaKnown RBP9.31□□□□□ -0.92
TRAPPC1-206ENST00000573989 TSPOP30536 169 aa9.31□□□□□ -0.92
TRAPPC1-206ENST00000573989 FXYD7P58549 80 aa9.31□□□□□ -0.92
TRAPPC1-206ENST00000573989 ZFP69Q49AA0 526 aa9.31□□□□□ -0.92
TRAPPC1-206ENST00000573989 EIF5AL1Q6IS14 154 aaKnown RBP9.31□□□□□ -0.92
TRAPPC1-206ENST00000573989 BAP18Q8IXM2 172 aa9.31□□□□□ -0.92
TRAPPC1-206ENST00000573989 RXFP4Q8TDU9 374 aa9.31□□□□□ -0.92
TRAPPC1-206ENST00000573989 PHYHIPLQ96FC7 376 aa9.31□□□□□ -0.92
TRAPPC1-206ENST00000573989 Q9H3A6 140 aa9.31□□□□□ -0.92
TRAPPC1-206ENST00000573989 TMEM167BQ9NRX6 74 aa9.31□□□□□ -0.92
TRAPPC1-206ENST00000573989 GOLT1BQ9Y3E0 138 aa9.31□□□□□ -0.92
TRAPPC1-206ENST00000573989 M0R3E3 92 aa9.3□□□□□ -0.92
TRAPPC1-206ENST00000573989 INSP01308 110 aa9.3□□□□□ -0.92
TRAPPC1-206ENST00000573989 MIFP14174 115 aa9.3□□□□□ -0.92
TRAPPC1-206ENST00000573989 LGALSLQ3ZCW2 172 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC1-206ENST00000573989 AMTNQ6UX39 209 aa9.3□□□□□ -0.92
TRAPPC1-206ENST00000573989 CSNK1G2-AS1Q8NCQ2 148 aa9.3□□□□□ -0.92
TRAPPC1-206ENST00000573989 CMTM2Q8TAZ6 248 aa9.3□□□□□ -0.92
TRAPPC1-206ENST00000573989 LINC00477Q96M19 166 aa9.3□□□□□ -0.92
TRAPPC1-206ENST00000573989 EDA2RQ9HAV5 297 aa9.3□□□□□ -0.92
TRAPPC1-206ENST00000573989 OTORQ9NRC9 128 aa9.3□□□□□ -0.92
TRAPPC1-206ENST00000573989 A0A1B0GVG6 124 aa9.29□□□□□ -0.92
TRAPPC1-206ENST00000573989 ZNF705EA8MWA4 302 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC1-206ENST00000573989 PRAC2D3DTV9 90 aa9.29□□□□□ -0.92
TRAPPC1-206ENST00000573989 EIF3GO75821 320 aaKnown RBP eCLIP9.29□□□□□ -0.92
TRAPPC1-206ENST00000573989 GCHFRP30047 84 aa9.29□□□□□ -0.92
TRAPPC1-206ENST00000573989 CDKN1BP46527 198 aa9.29□□□□□ -0.92
TRAPPC1-206ENST00000573989 SPINK13Q1W4C9 94 aa9.29□□□□□ -0.92
TRAPPC1-206ENST00000573989 TMEM78Q5T7P6 136 aa9.29□□□□□ -0.92
TRAPPC1-206ENST00000573989 DPPA3Q6W0C5 159 aa9.29□□□□□ -0.92
TRAPPC1-206ENST00000573989 IQCF2Q8IXL9 164 aa9.29□□□□□ -0.92
TRAPPC1-206ENST00000573989 ARL6IP6Q8N6S5 226 aa9.29□□□□□ -0.92
TRAPPC1-206ENST00000573989 STOML3Q8TAV4 291 aa9.29□□□□□ -0.92
TRAPPC1-206ENST00000573989 IGF2BP2-AS1Q96M15 143 aa9.29□□□□□ -0.92
TRAPPC1-206ENST00000573989 ODF3Q96PU9 254 aa9.29□□□□□ -0.92
TRAPPC1-206ENST00000573989 TMEM208Q9BTX3 173 aa9.29□□□□□ -0.92
TRAPPC1-206ENST00000573989 IGHV3OR16-12A0A075B7B8 117 aa9.28□□□□□ -0.92
TRAPPC1-206ENST00000573989 A0A0J9YWU9 116 aa9.28□□□□□ -0.92
TRAPPC1-206ENST00000573989 RBAKDNA6NC62 111 aa9.28□□□□□ -0.92
TRAPPC1-206ENST00000573989 PGPA6NDG6 321 aa9.28□□□□□ -0.92
TRAPPC1-206ENST00000573989 SMIM9A6NGZ8 99 aa9.28□□□□□ -0.92
TRAPPC1-206ENST00000573989 NPIPB6E9PJ23 425 aa9.28□□□□□ -0.92
TRAPPC1-206ENST00000573989 M0R2Z0 102 aa9.28□□□□□ -0.92
TRAPPC1-206ENST00000573989 LEPP41159 167 aa9.28□□□□□ -0.92
TRAPPC1-206ENST00000573989 SLC51BQ86UW2 128 aa9.28□□□□□ -0.92
TRAPPC1-206ENST00000573989 MUC7Q8TAX7 377 aa9.28□□□□□ -0.92
TRAPPC1-206ENST00000573989 NEU1Q99519 415 aa9.28□□□□□ -0.92
TRAPPC1-206ENST00000573989 C11orf68Q9H3H3 251 aaKnown RBP9.28□□□□□ -0.92
TRAPPC1-206ENST00000573989 MAP1LC3B2A6NCE7 125 aa9.27□□□□□ -0.93
TRAPPC1-206ENST00000573989 C3orf84H3BNL1 204 aa9.27□□□□□ -0.93
TRAPPC1-206ENST00000573989 SLC25A5P05141 298 aaKnown RBP9.27□□□□□ -0.93
TRAPPC1-206ENST00000573989 RAB5CP51148 216 aa9.27□□□□□ -0.93
TRAPPC1-206ENST00000573989 ZNF705AQ6ZN79 300 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC1-206ENST00000573989 C9orf47Q6ZRZ4 202 aa9.27□□□□□ -0.93
TRAPPC1-206ENST00000573989 TMEM256Q8N2U0 113 aa9.27□□□□□ -0.93
TRAPPC1-206ENST00000573989 SUN5Q8TC36 379 aa9.27□□□□□ -0.93
TRAPPC1-206ENST00000573989 NKX6-2Q9C056 277 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC1-206ENST00000573989 MAP1LC3BQ9GZQ8 125 aa9.27□□□□□ -0.93
TRAPPC1-206ENST00000573989 SERTM2A0A1B0GWG4 89 aa9.26□□□□□ -0.93
TRAPPC1-206ENST00000573989 K7EQM0 130 aa9.26□□□□□ -0.93
TRAPPC1-206ENST00000573989 HBE1P02100 147 aa9.26□□□□□ -0.93
TRAPPC1-206ENST00000573989 CT45A10P0DMU9 189 aa9.26□□□□□ -0.93
TRAPPC1-206ENST00000573989 PRB4P10163 310 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC1-206ENST00000573989 ZNF726P1Q15940 193 aa9.26□□□□□ -0.93
TRAPPC1-206ENST00000573989 SSX7Q7RTT5 188 aa9.26□□□□□ -0.93
TRAPPC1-206ENST00000573989 FAM213BQ8TBF2 198 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms