RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 GAGE12BA1L429 117 aa15.2■□□□□ 0.02
SNF8-216ENST00000573795 C7orf66A4D0T2 115 aa15.2■□□□□ 0.02
SNF8-216ENST00000573795 GAGE7O76087 117 aa15.2■□□□□ 0.02
SNF8-216ENST00000573795 GAGE12FP0CL80 117 aa15.2■□□□□ 0.02
SNF8-216ENST00000573795 GAGE12GP0CL81 117 aa15.2■□□□□ 0.02
SNF8-216ENST00000573795 GAGE12IP0CL82 117 aa15.2■□□□□ 0.02
SNF8-216ENST00000573795 CT45A10P0DMU9 189 aa15.2■□□□□ 0.02
SNF8-216ENST00000573795 KRTAP10-2P60368 255 aa15.2■□□□□ 0.02
SNF8-216ENST00000573795 SDHCQ99643 169 aaPredicted RBP15.2■□□□□ 0.02
SNF8-216ENST00000573795 GGACTQ9BVM4 153 aa15.2■□□□□ 0.02
SNF8-216ENST00000573795 RBM38Q9H0Z9 239 aaKnown RBP15.2■□□□□ 0.02
SNF8-216ENST00000573795 COX7A2P2O60397 106 aa15.19■□□□□ 0.02
SNF8-216ENST00000573795 MBPP02686 304 aaPredicted RBP15.19■□□□□ 0.02
SNF8-216ENST00000573795 C4orf46Q504U0 113 aa15.19■□□□□ 0.02
SNF8-216ENST00000573795 Q8N1X5 172 aa15.19■□□□□ 0.02
SNF8-216ENST00000573795 FAT1Q14517 4588 aa15.18■□□□□ 0.02
SNF8-216ENST00000573795 TTC32Q5I0X7 151 aa15.18■□□□□ 0.02
SNF8-216ENST00000573795 SPANXN2Q5MJ10 180 aa15.18■□□□□ 0.02
SNF8-216ENST00000573795 CCDC28AQ8IWP9 274 aa15.18■□□□□ 0.02
SNF8-216ENST00000573795 MITD1Q8WV92 249 aa15.18■□□□□ 0.02
SNF8-216ENST00000573795 TMPRSS5Q9H3S3 457 aa15.18■□□□□ 0.02
SNF8-216ENST00000573795 GSKIPQ9P0R6 139 aa15.18■□□□□ 0.02
SNF8-216ENST00000573795 MRPS16Q9Y3D3 137 aaKnown RBP15.18■□□□□ 0.02
SNF8-216ENST00000573795 PXMP4Q9Y6I8 212 aa15.18■□□□□ 0.02
SNF8-216ENST00000573795 TRAV5A0A0B4J249 113 aa15.17■□□□□ 0.02
SNF8-216ENST00000573795 NPIPB6E9PJ23 425 aa15.17■□□□□ 0.02
SNF8-216ENST00000573795 H3BNG1 76 aa15.17■□□□□ 0.02
SNF8-216ENST00000573795 J3KRW8 73 aa15.17■□□□□ 0.02
SNF8-216ENST00000573795 RLN2P04090 185 aa15.17■□□□□ 0.02
SNF8-216ENST00000573795 C10orf113Q5VZT2 155 aa15.17■□□□□ 0.02
SNF8-216ENST00000573795 TRIQKQ629K1 86 aa15.17■□□□□ 0.02
SNF8-216ENST00000573795 ZNF431Q8TF32 576 aaPredicted RBP15.17■□□□□ 0.02
SNF8-216ENST00000573795 ODF3Q96PU9 254 aa15.17■□□□□ 0.02
SNF8-216ENST00000573795 TRAV12-3A0A0B4J271 114 aa15.16■□□□□ 0.02
SNF8-216ENST00000573795 CCDC160A6NGH7 325 aa15.16■□□□□ 0.02
SNF8-216ENST00000573795 SNURFLB1AK76 121 aa15.16■□□□□ 0.02
SNF8-216ENST00000573795 Q6ZTI0 123 aa15.16■□□□□ 0.02
SNF8-216ENST00000573795 A0A1W2PPQ1 181 aa15.15■□□□□ 0.02
SNF8-216ENST00000573795 CCSO14618 274 aa15.15■□□□□ 0.02
SNF8-216ENST00000573795 BTF3P20290 206 aaKnown RBP15.15■□□□□ 0.02
SNF8-216ENST00000573795 INPP1P49441 399 aa15.15■□□□□ 0.02
SNF8-216ENST00000573795 DAZ2Q13117 558 aaKnown RBP15.15■□□□□ 0.02
SNF8-216ENST00000573795 VSIG2Q96IQ7 327 aa15.15■□□□□ 0.02
SNF8-216ENST00000573795 C11orf1Q9H5F2 150 aa15.15■□□□□ 0.02
SNF8-216ENST00000573795 LEPP41159 167 aa15.14■□□□□ 0.01
SNF8-216ENST00000573795 CAMLGP49069 296 aa15.14■□□□□ 0.01
SNF8-216ENST00000573795 MIC13Q5XKP0 118 aa15.14■□□□□ 0.01
SNF8-216ENST00000573795 NRARPQ7Z6K4 114 aa15.14■□□□□ 0.01
SNF8-216ENST00000573795 PYGO2Q9BRQ0 406 aa15.14■□□□□ 0.01
SNF8-216ENST00000573795 DNAJC4Q9NNZ3 241 aa15.14■□□□□ 0.01
SNF8-216ENST00000573795 ZNF586Q9NXT0 402 aa15.14■□□□□ 0.01
SNF8-216ENST00000573795 C11orf72Q8NBR9 251 aa15.13■□□□□ 0.01
SNF8-216ENST00000573795 SCRT2Q9NQ03 307 aa15.13■□□□□ 0.01
SNF8-216ENST00000573795 A0A096LPF7 62 aa15.12■□□□□ 0.01
SNF8-216ENST00000573795 GUK1Q16774 197 aa15.12■□□□□ 0.01
SNF8-216ENST00000573795 WDR83OSQ9Y284 106 aa15.12■□□□□ 0.01
SNF8-216ENST00000573795 M0R3E3 92 aa15.11■□□□□ 0.01
SNF8-216ENST00000573795 Q6ZRN7 208 aaPredicted RBP15.11■□□□□ 0.01
SNF8-216ENST00000573795 FAM19A4Q96LR4 140 aa15.11■□□□□ 0.01
SNF8-216ENST00000573795 C18orf15Q96N68 181 aa15.11■□□□□ 0.01
SNF8-216ENST00000573795 GSN-AS1Q9NRJ2 163 aa15.11■□□□□ 0.01
SNF8-216ENST00000573795 ZNF253O75346 499 aa15.1■□□□□ 0.01
SNF8-216ENST00000573795 CST7O76096 145 aa15.1■□□□□ 0.01
SNF8-216ENST00000573795 IL7P13232 177 aa15.1■□□□□ 0.01
SNF8-216ENST00000573795 LINC00315P59091 139 aa15.1■□□□□ 0.01
SNF8-216ENST00000573795 ERCC8Q13216 396 aa15.1■□□□□ 0.01
SNF8-216ENST00000573795 VWC2Q2TAL6 325 aa15.1■□□□□ 0.01
SNF8-216ENST00000573795 Q6ZRG5 221 aa15.1■□□□□ 0.01
SNF8-216ENST00000573795 LSM5Q9Y4Y9 91 aaKnown RBP15.1■□□□□ 0.01
SNF8-216ENST00000573795 TRBV19A0A075B6N1 114 aa15.09■□□□□ 0.01
SNF8-216ENST00000573795 C7orf71A4D174 169 aa15.09■□□□□ 0.01
SNF8-216ENST00000573795 FAM24AA6NFZ4 105 aa15.09■□□□□ 0.01
SNF8-216ENST00000573795 KLLNB2CW77 178 aa15.09■□□□□ 0.01
SNF8-216ENST00000573795 L7N2F9 121 aa15.09■□□□□ 0.01
SNF8-216ENST00000573795 ZNF324O75467 553 aaPredicted RBP15.09■□□□□ 0.01
SNF8-216ENST00000573795 NDUFB4O95168 129 aa15.09■□□□□ 0.01
SNF8-216ENST00000573795 SLC25A5P05141 298 aaKnown RBP15.09■□□□□ 0.01
SNF8-216ENST00000573795 VAMP2P63027 116 aa15.09■□□□□ 0.01
SNF8-216ENST00000573795 OR1L4Q8NGR5 311 aa15.09■□□□□ 0.01
SNF8-216ENST00000573795 MRPL53Q96EL3 112 aaKnown RBP15.09■□□□□ 0.01
SNF8-216ENST00000573795 C20orf85Q9H1P6 137 aa15.09■□□□□ 0.01
SNF8-216ENST00000573795 CENPXA8MT69 81 aa15.08■□□□□ 0
SNF8-216ENST00000573795 BCAP31P51572 246 aa15.08■□□□□ 0
SNF8-216ENST00000573795 CAV2P51636 162 aa15.08■□□□□ 0
SNF8-216ENST00000573795 CD300CQ08708 224 aa15.08■□□□□ 0
SNF8-216ENST00000573795 BTN1A1Q13410 526 aa15.08■□□□□ 0
SNF8-216ENST00000573795 RAB31Q13636 194 aa15.08■□□□□ 0
SNF8-216ENST00000573795 LINC00467Q9BRT7 94 aa15.08■□□□□ 0
SNF8-216ENST00000573795 UQCC1Q9NVA1 299 aa15.08■□□□□ 0
SNF8-216ENST00000573795 VPS13BQ7Z7G8 4022 aa15.07■□□□□ 0
SNF8-216ENST00000573795 PLA2G10O15496 165 aa15.07■□□□□ 0
SNF8-216ENST00000573795 RPL29P47914 159 aaKnown RBP15.07■□□□□ 0
SNF8-216ENST00000573795 ZNF680Q8NEM1 530 aa15.07■□□□□ 0
SNF8-216ENST00000573795 PFDN5Q99471 154 aa15.07■□□□□ 0
SNF8-216ENST00000573795 SLC39A9Q9NUM3 307 aa15.07■□□□□ 0
SNF8-216ENST00000573795 TRGV2A0A075B6R0 118 aa15.06■□□□□ 0
SNF8-216ENST00000573795 UBE2L5PA0A1B0GUS4 154 aa15.06■□□□□ 0
SNF8-216ENST00000573795 ZNF846Q147U1 533 aa15.06■□□□□ 0
SNF8-216ENST00000573795 CNPY1Q3B7I2 92 aa15.06■□□□□ 0
SNF8-216ENST00000573795 ANXA2RQ3ZCQ2 193 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms