RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 C11orf1Q9H5F2 150 aa6.84□□□□□ -1.31
NPLOC4-212ENST00000573328 SLC39A9Q9NUM3 307 aa6.84□□□□□ -1.31
NPLOC4-212ENST00000573328 HECTD4Q9Y4D8 3996 aa6.84□□□□□ -1.31
NPLOC4-212ENST00000573328 PRAC2D3DTV9 90 aa6.83□□□□□ -1.32
NPLOC4-212ENST00000573328 H3BQ15 152 aa6.83□□□□□ -1.32
NPLOC4-212ENST00000573328 H7BYZ3 331 aa6.83□□□□□ -1.32
NPLOC4-212ENST00000573328 SIX6O95475 246 aa6.83□□□□□ -1.32
NPLOC4-212ENST00000573328 NUDT3O95989 172 aa6.83□□□□□ -1.32
NPLOC4-212ENST00000573328 RLN2P04090 185 aa6.83□□□□□ -1.32
NPLOC4-212ENST00000573328 ATP5G1P05496 136 aa6.83□□□□□ -1.32
NPLOC4-212ENST00000573328 RPL29P47914 159 aaKnown RBP6.83□□□□□ -1.32
NPLOC4-212ENST00000573328 ATP5G3P48201 142 aa6.83□□□□□ -1.32
NPLOC4-212ENST00000573328 GUK1Q16774 197 aa6.83□□□□□ -1.32
NPLOC4-212ENST00000573328 ATP6V1FQ16864 119 aa6.83□□□□□ -1.32
NPLOC4-212ENST00000573328 VWC2Q2TAL6 325 aa6.83□□□□□ -1.32
NPLOC4-212ENST00000573328 LRRC37A5PQ49AS3 106 aa6.83□□□□□ -1.32
NPLOC4-212ENST00000573328 LINC00299Q6ZSB3 139 aa6.83□□□□□ -1.32
NPLOC4-212ENST00000573328 CCDC28AQ8IWP9 274 aa6.83□□□□□ -1.32
NPLOC4-212ENST00000573328 TIMM8BQ9Y5J9 83 aaPredicted RBP6.83□□□□□ -1.32
NPLOC4-212ENST00000573328 MPDU1O75352 247 aa6.82□□□□□ -1.32
NPLOC4-212ENST00000573328 UPK1BO75841 260 aa6.82□□□□□ -1.32
NPLOC4-212ENST00000573328 LEPP41159 167 aa6.82□□□□□ -1.32
NPLOC4-212ENST00000573328 RNF212Q495C1 297 aa6.82□□□□□ -1.32
NPLOC4-212ENST00000573328 GFI1BQ5VTD9 330 aa6.82□□□□□ -1.32
NPLOC4-212ENST00000573328 ZNF493Q6ZR52 646 aa6.82□□□□□ -1.32
NPLOC4-212ENST00000573328 THAP6Q8TBB0 222 aa6.82□□□□□ -1.32
NPLOC4-212ENST00000573328 TMEM263Q8WUH6 116 aaKnown RBP6.82□□□□□ -1.32
NPLOC4-212ENST00000573328 BLNKQ8WV28 456 aa6.82□□□□□ -1.32
NPLOC4-212ENST00000573328 C20orf144Q9BQM9 153 aa6.82□□□□□ -1.32
NPLOC4-212ENST00000573328 NPCDR1Q9BY65 106 aa6.82□□□□□ -1.32
NPLOC4-212ENST00000573328 SLC25A31Q9H0C2 315 aa6.82□□□□□ -1.32
NPLOC4-212ENST00000573328 NOP10Q9NPE3 64 aaKnown RBP6.82□□□□□ -1.32
NPLOC4-212ENST00000573328 TIMM9Q9Y5J7 89 aa6.82□□□□□ -1.32
NPLOC4-212ENST00000573328 TRAV12-3A0A0B4J271 114 aa6.81□□□□□ -1.32
NPLOC4-212ENST00000573328 PLAC8L1A1L4L8 177 aa6.81□□□□□ -1.32
NPLOC4-212ENST00000573328 PRSS29PA6NIE9 313 aa6.81□□□□□ -1.32
NPLOC4-212ENST00000573328 SNURFLB1AK76 121 aa6.81□□□□□ -1.32
NPLOC4-212ENST00000573328 E5RGE8 158 aa6.81□□□□□ -1.32
NPLOC4-212ENST00000573328 PRAF2O60831 178 aa6.81□□□□□ -1.32
NPLOC4-212ENST00000573328 ZNF253O75346 499 aa6.81□□□□□ -1.32
NPLOC4-212ENST00000573328 PYYP10082 97 aa6.81□□□□□ -1.32
NPLOC4-212ENST00000573328 NHLH2Q02577 135 aa6.81□□□□□ -1.32
NPLOC4-212ENST00000573328 IL15RAQ13261 267 aa6.81□□□□□ -1.32
NPLOC4-212ENST00000573328 CLINT1Q14677 625 aa6.81□□□□□ -1.32
NPLOC4-212ENST00000573328 KIR3DS1Q14943 382 aa6.81□□□□□ -1.32
NPLOC4-212ENST00000573328 LGALS9BQ3B8N2 356 aa6.81□□□□□ -1.32
NPLOC4-212ENST00000573328 OR5C1Q8NGR4 320 aa6.81□□□□□ -1.32
NPLOC4-212ENST00000573328 RNASE8Q8TDE3 154 aaKnown RBP6.81□□□□□ -1.32
NPLOC4-212ENST00000573328 SAT2Q96F10 170 aaPredicted RBP6.81□□□□□ -1.32
NPLOC4-212ENST00000573328 AAMDCQ9H7C9 122 aa6.81□□□□□ -1.32
NPLOC4-212ENST00000573328 ZNF586Q9NXT0 402 aa6.81□□□□□ -1.32
NPLOC4-212ENST00000573328 TRBV19A0A075B6N1 114 aa6.8□□□□□ -1.32
NPLOC4-212ENST00000573328 CBY3A6NI87 242 aa6.8□□□□□ -1.32
NPLOC4-212ENST00000573328 NPIPB6E9PJ23 425 aa6.8□□□□□ -1.32
NPLOC4-212ENST00000573328 INMT-MINDY4F8WBC2 141 aa6.8□□□□□ -1.32
NPLOC4-212ENST00000573328 M0R3E3 92 aa6.8□□□□□ -1.32
NPLOC4-212ENST00000573328 GCSAMLQ5JQS6 135 aa6.8□□□□□ -1.32
NPLOC4-212ENST00000573328 SOHLH1Q5JUK2 328 aa6.8□□□□□ -1.32
NPLOC4-212ENST00000573328 NMES1Q9C002 83 aa6.8□□□□□ -1.32
NPLOC4-212ENST00000573328 KCNIP2Q9NS61 270 aa6.8□□□□□ -1.32
NPLOC4-212ENST00000573328 PTTG2Q9NZH5 202 aa6.8□□□□□ -1.32
NPLOC4-212ENST00000573328 OR5AC2Q9NZP5 309 aa6.8□□□□□ -1.32
NPLOC4-212ENST00000573328 GAGE12BA1L429 117 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 C17orf112F2Z3M2 114 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 RTL8CO15255 209 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 SSNA1O43805 119 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 GAGE7O76087 117 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 GAGE12FP0CL80 117 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 GAGE12GP0CL81 117 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 GAGE12IP0CL82 117 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 PET100P0DJ07 73 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 CT45A10P0DMU9 189 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 HIST1H1EP10412 219 aaKnown RBP6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 DEFA1P59665 94 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 DEFA3P59666 94 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 CYCSP99999 105 aaKnown RBP6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 ERCC8Q13216 396 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 OR5I1Q13606 314 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 PDE6HQ13956 83 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 EXOC3-AS1Q8N2X6 119 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 CHAC2Q8WUX2 184 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 MRPL53Q96EL3 112 aaKnown RBP6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 ODF3Q96PU9 254 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 TMEM14CQ9P0S9 112 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 PRELID1Q9Y255 219 aa6.79□□□□□ -1.32
NPLOC4-212ENST00000573328 C7orf71A4D174 169 aa6.78□□□□□ -1.32
NPLOC4-212ENST00000573328 SLC25A5P05141 298 aaKnown RBP6.78□□□□□ -1.32
NPLOC4-212ENST00000573328 CCL18P55774 89 aa6.78□□□□□ -1.32
NPLOC4-212ENST00000573328 FAM3BP58499 235 aaPredicted RBP6.78□□□□□ -1.32
NPLOC4-212ENST00000573328 ICAM4Q14773 271 aa6.78□□□□□ -1.32
NPLOC4-212ENST00000573328 TMEM78Q5T7P6 136 aa6.78□□□□□ -1.32
NPLOC4-212ENST00000573328 FAM122CQ6P4D5 195 aa6.78□□□□□ -1.32
NPLOC4-212ENST00000573328 MIR17HGQ75NE6 70 aa6.78□□□□□ -1.32
NPLOC4-212ENST00000573328 RNF141Q8WVD5 230 aa6.78□□□□□ -1.32
NPLOC4-212ENST00000573328 PYGO2Q9BRQ0 406 aa6.78□□□□□ -1.32
NPLOC4-212ENST00000573328 SLC25A2Q9BXI2 301 aa6.78□□□□□ -1.32
NPLOC4-212ENST00000573328 MRPL32Q9BYC8 188 aaKnown RBP6.78□□□□□ -1.32
NPLOC4-212ENST00000573328 TRAV26-1A0A087WT03 109 aa6.77□□□□□ -1.33
NPLOC4-212ENST00000573328 IGKV2-40A0A087WW87 121 aaPredicted RBP6.77□□□□□ -1.33
NPLOC4-212ENST00000573328 OR7C2O60412 319 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 315 ms