RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 Q9H3A6 140 aa17.2■□□□□ 0.34
TVP23A-206ENST00000572980 HLA-DRB4X5D2U9 266 aa17.2■□□□□ 0.34
TVP23A-206ENST00000572980 A0A0J9YX75 114 aa17.19■□□□□ 0.34
TVP23A-206ENST00000572980 F6UB75 175 aa17.19■□□□□ 0.34
TVP23A-206ENST00000572980 H3BMM0 161 aa17.19■□□□□ 0.34
TVP23A-206ENST00000572980 RPL35AP18077 110 aaKnown RBP17.19■□□□□ 0.34
TVP23A-206ENST00000572980 DEFB1P60022 68 aa17.19■□□□□ 0.34
TVP23A-206ENST00000572980 FAM74A1Q5RGS3 127 aa17.19■□□□□ 0.34
TVP23A-206ENST00000572980 GDF5OSQ5U4N7 250 aa17.19■□□□□ 0.34
TVP23A-206ENST00000572980 ZNF705FA8MVS1 300 aaPredicted RBP17.19■□□□□ 0.34
TVP23A-206ENST00000572980 TRPT1Q86TN4 253 aaKnown RBP17.19■□□□□ 0.34
TVP23A-206ENST00000572980 TEX46H3BTG2 121 aa17.18■□□□□ 0.34
TVP23A-206ENST00000572980 DUSP14O95147 198 aaKnown RBP17.18■□□□□ 0.34
TVP23A-206ENST00000572980 APOC4P55056 127 aa17.18■□□□□ 0.34
TVP23A-206ENST00000572980 TMPRSS5Q9H3S3 457 aa17.18■□□□□ 0.34
TVP23A-206ENST00000572980 OTORQ9NRC9 128 aa17.18■□□□□ 0.34
TVP23A-206ENST00000572980 M0R3E3 92 aa17.17■□□□□ 0.34
TVP23A-206ENST00000572980 CSN1S1P47710 185 aa17.17■□□□□ 0.34
TVP23A-206ENST00000572980 OR4B1Q8NGF8 309 aa17.17■□□□□ 0.34
TVP23A-206ENST00000572980 OR8A1Q8NGG7 326 aa17.17■□□□□ 0.34
TVP23A-206ENST00000572980 KIR2DL5BA0A0G2JN68 375 aa17.16■□□□□ 0.34
TVP23A-206ENST00000572980 KIR2DL5BA0A0G2JPC4 375 aa17.16■□□□□ 0.34
TVP23A-206ENST00000572980 PGPA6NDG6 321 aa17.16■□□□□ 0.34
TVP23A-206ENST00000572980 ZNF705EA8MWA4 302 aaPredicted RBP17.16■□□□□ 0.34
TVP23A-206ENST00000572980 KIR2DL5AQ8N109 375 aa17.16■□□□□ 0.34
TVP23A-206ENST00000572980 KIR2DL5BQ8NHK3 375 aa17.16■□□□□ 0.34
TVP23A-206ENST00000572980 RXFP4Q8TDU9 374 aa17.16■□□□□ 0.34
TVP23A-206ENST00000572980 B9D2Q9BPU9 175 aa17.16■□□□□ 0.34
TVP23A-206ENST00000572980 AGRNO00468 2067 aa17.16■□□□□ 0.34
TVP23A-206ENST00000572980 NUTF2P61970 127 aaKnown RBP17.15■□□□□ 0.34
TVP23A-206ENST00000572980 OR10J6PQ8NGY7 276 aa17.15■□□□□ 0.34
TVP23A-206ENST00000572980 CMTM2Q8TAZ6 248 aa17.15■□□□□ 0.34
TVP23A-206ENST00000572980 CLUHP3Q96NS8 147 aa17.15■□□□□ 0.34
TVP23A-206ENST00000572980 CSTL1Q9H114 145 aa17.15■□□□□ 0.34
TVP23A-206ENST00000572980 TRAV1-1A0A0B4J248 108 aa17.15■□□□□ 0.34
TVP23A-206ENST00000572980 A0A1W2PRE2 83 aa17.15■□□□□ 0.34
TVP23A-206ENST00000572980 IGKV3-20P01619 116 aa17.15■□□□□ 0.34
TVP23A-206ENST00000572980 HBE1P02100 147 aa17.15■□□□□ 0.34
TVP23A-206ENST00000572980 ZNF705DP0CH99 300 aaPredicted RBP17.15■□□□□ 0.34
TVP23A-206ENST00000572980 ZNF705BP0CI00 300 aaPredicted RBP17.15■□□□□ 0.34
TVP23A-206ENST00000572980 CNN1P51911 297 aaKnown RBP17.15■□□□□ 0.34
TVP23A-206ENST00000572980 HIST1H1AQ02539 215 aaPredicted RBP17.15■□□□□ 0.34
TVP23A-206ENST00000572980 HAGHQ16775 308 aa17.15■□□□□ 0.34
TVP23A-206ENST00000572980 MORN3Q6PF18 240 aaPredicted RBP17.15■□□□□ 0.34
TVP23A-206ENST00000572980 A0A1B0GV50 99 aa17.14■□□□□ 0.33
TVP23A-206ENST00000572980 PRAC2D3DTV9 90 aa17.14■□□□□ 0.33
TVP23A-206ENST00000572980 SBSPONQ8IVN8 264 aa17.14■□□□□ 0.33
TVP23A-206ENST00000572980 UBE2CO00762 179 aa17.13■□□□□ 0.33
TVP23A-206ENST00000572980 ARL6IP6Q8N6S5 226 aa17.13■□□□□ 0.33
TVP23A-206ENST00000572980 NKX6-2Q9C056 277 aaPredicted RBP17.13■□□□□ 0.33
TVP23A-206ENST00000572980 PRB4P10163 310 aaPredicted RBP17.12■□□□□ 0.33
TVP23A-206ENST00000572980 PPT1P50897 306 aa17.12■□□□□ 0.33
TVP23A-206ENST00000572980 SUMO1P63165 101 aaKnown RBP17.12■□□□□ 0.33
TVP23A-206ENST00000572980 BLOC1S1P78537 153 aa17.12■□□□□ 0.33
TVP23A-206ENST00000572980 TEX261Q6UWH6 196 aa17.12■□□□□ 0.33
TVP23A-206ENST00000572980 UBE2G2P60604 165 aa17.11■□□□□ 0.33
TVP23A-206ENST00000572980 ASCL2Q99929 193 aa17.11■□□□□ 0.33
TVP23A-206ENST00000572980 A8MTW9 85 aa17.11■□□□□ 0.33
TVP23A-206ENST00000572980 SLC25A5P05141 298 aaKnown RBP17.11■□□□□ 0.33
TVP23A-206ENST00000572980 C5orf17Q8NAS9 161 aa17.11■□□□□ 0.33
TVP23A-206ENST00000572980 PPP1R14DQ9NXH3 145 aa17.11■□□□□ 0.33
TVP23A-206ENST00000572980 YTHDF2Q9Y5A9 579 aaKnown RBP17.11■□□□□ 0.33
TVP23A-206ENST00000572980 ARL2-SNX15V9GYD0 113 aa17.11■□□□□ 0.33
TVP23A-206ENST00000572980 FAM74A7A6NL05 159 aa17.1■□□□□ 0.33
TVP23A-206ENST00000572980 IFNA7P01567 189 aa17.1■□□□□ 0.33
TVP23A-206ENST00000572980 GGTLC3B5MD39 225 aa17.09■□□□□ 0.33
TVP23A-206ENST00000572980 DIRC3C9JPN6 131 aa17.09■□□□□ 0.33
TVP23A-206ENST00000572980 NPIPB6E9PJ23 425 aa17.09■□□□□ 0.33
TVP23A-206ENST00000572980 CA1P00915 261 aaPredicted RBP17.09■□□□□ 0.33
TVP23A-206ENST00000572980 ZNF680Q8NEM1 530 aa17.09■□□□□ 0.33
TVP23A-206ENST00000572980 C1QTNF4Q9BXJ3 329 aa17.09■□□□□ 0.33
TVP23A-206ENST00000572980 RBAKDNA6NC62 111 aa17.08■□□□□ 0.32
TVP23A-206ENST00000572980 CST9LP1Q5W188 147 aa17.08■□□□□ 0.32
TVP23A-206ENST00000572980 Q6ZWC4 215 aa17.08■□□□□ 0.32
TVP23A-206ENST00000572980 LINC00477Q96M19 166 aa17.08■□□□□ 0.32
TVP23A-206ENST00000572980 RPH3ALQ9UNE2 315 aa17.08■□□□□ 0.32
TVP23A-206ENST00000572980 IGKV2-40A0A087WW87 121 aaPredicted RBP17.07■□□□□ 0.32
TVP23A-206ENST00000572980 PAGE4O60829 102 aa17.07■□□□□ 0.32
TVP23A-206ENST00000572980 IGKV2D-40P01614 121 aaPredicted RBP17.07■□□□□ 0.32
TVP23A-206ENST00000572980 NHLRC4P0CG21 123 aaPredicted RBP17.07■□□□□ 0.32
TVP23A-206ENST00000572980 CCL20P78556 96 aa17.07■□□□□ 0.32
TVP23A-206ENST00000572980 AMTNQ6UX39 209 aa17.07■□□□□ 0.32
TVP23A-206ENST00000572980 C9orf47Q6ZRZ4 202 aa17.07■□□□□ 0.32
TVP23A-206ENST00000572980 TMEM78Q5T7P6 136 aa17.06■□□□□ 0.32
TVP23A-206ENST00000572980 SLC35B3Q9H1N7 401 aa17.06■□□□□ 0.32
TVP23A-206ENST00000572980 ZMAT4Q9H898 229 aa17.06■□□□□ 0.32
TVP23A-206ENST00000572980 MANBALQ9NQG1 85 aa17.06■□□□□ 0.32
TVP23A-206ENST00000572980 GNG13Q9P2W3 67 aa17.06■□□□□ 0.32
TVP23A-206ENST00000572980 EPDR1Q9UM22 224 aa17.06■□□□□ 0.32
TVP23A-206ENST00000572980 SERTM2A0A1B0GWG4 89 aa17.06■□□□□ 0.32
TVP23A-206ENST00000572980 ERCC8Q13216 396 aa17.06■□□□□ 0.32
TVP23A-206ENST00000572980 SPATA25Q9BR10 227 aa17.06■□□□□ 0.32
TVP23A-206ENST00000572980 TM2D3Q9BRN9 247 aa17.06■□□□□ 0.32
TVP23A-206ENST00000572980 AGPAT4-IT1Q9H0P7 198 aa17.06■□□□□ 0.32
TVP23A-206ENST00000572980 K7EQM0 130 aa17.05■□□□□ 0.32
TVP23A-206ENST00000572980 AMBPP02760 352 aa17.05■□□□□ 0.32
TVP23A-206ENST00000572980 TCRAP04437 139 aa17.05■□□□□ 0.32
TVP23A-206ENST00000572980 GIG44P09565 113 aaPredicted RBP17.05■□□□□ 0.32
TVP23A-206ENST00000572980 FXYD7P58549 80 aa17.05■□□□□ 0.32
TVP23A-206ENST00000572980 GNG5P63218 68 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms