RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 RPUSD4Q96CM3 377 aaKnown RBP16.21■□□□□ 0.19
RAB40B-207ENST00000572603 CLEC5AQ9NY25 188 aa16.21■□□□□ 0.19
RAB40B-207ENST00000572603 NBEAL2Q6ZNJ1 2754 aa16.21■□□□□ 0.18
RAB40B-207ENST00000572603 KIR2DL5BA0A0G2JN68 375 aa16.2■□□□□ 0.18
RAB40B-207ENST00000572603 KIR2DL5BA0A0G2JPC4 375 aa16.2■□□□□ 0.18
RAB40B-207ENST00000572603 MAP1LC3B2A6NCE7 125 aa16.2■□□□□ 0.18
RAB40B-207ENST00000572603 PRAC2D3DTV9 90 aa16.2■□□□□ 0.18
RAB40B-207ENST00000572603 DPPA3Q6W0C5 159 aa16.2■□□□□ 0.18
RAB40B-207ENST00000572603 KIR2DL5AQ8N109 375 aa16.2■□□□□ 0.18
RAB40B-207ENST00000572603 KIR2DL5BQ8NHK3 375 aa16.2■□□□□ 0.18
RAB40B-207ENST00000572603 FAM213BQ8TBF2 198 aa16.2■□□□□ 0.18
RAB40B-207ENST00000572603 MRPL53Q96EL3 112 aaKnown RBP16.2■□□□□ 0.18
RAB40B-207ENST00000572603 MAP1LC3BQ9GZQ8 125 aa16.2■□□□□ 0.18
RAB40B-207ENST00000572603 ZNF705DP0CH99 300 aaPredicted RBP16.19■□□□□ 0.18
RAB40B-207ENST00000572603 ZNF705BP0CI00 300 aaPredicted RBP16.19■□□□□ 0.18
RAB40B-207ENST00000572603 FGF8P55075 233 aaPredicted RBP16.19■□□□□ 0.18
RAB40B-207ENST00000572603 ICAM4Q14773 271 aa16.19■□□□□ 0.18
RAB40B-207ENST00000572603 EIF5AL1Q6IS14 154 aaKnown RBP16.19■□□□□ 0.18
RAB40B-207ENST00000572603 EBLN2Q6P2I7 272 aa16.19■□□□□ 0.18
RAB40B-207ENST00000572603 OR8A1Q8NGG7 326 aa16.19■□□□□ 0.18
RAB40B-207ENST00000572603 CLUHP3Q96NS8 147 aa16.19■□□□□ 0.18
RAB40B-207ENST00000572603 TM2D3Q9BRN9 247 aa16.19■□□□□ 0.18
RAB40B-207ENST00000572603 Q9H3A6 140 aa16.19■□□□□ 0.18
RAB40B-207ENST00000572603 GIG44P09565 113 aaPredicted RBP16.18■□□□□ 0.18
RAB40B-207ENST00000572603 SULT1A2P50226 295 aa16.18■□□□□ 0.18
RAB40B-207ENST00000572603 APOC4P55056 127 aa16.18■□□□□ 0.18
RAB40B-207ENST00000572603 LYPD1Q8N2G4 141 aa16.18■□□□□ 0.18
RAB40B-207ENST00000572603 MBD3L1Q8WWY6 194 aa16.18■□□□□ 0.18
RAB40B-207ENST00000572603 PRELID1Q9Y255 219 aa16.18■□□□□ 0.18
RAB40B-207ENST00000572603 CNN1P51911 297 aaKnown RBP16.17■□□□□ 0.18
RAB40B-207ENST00000572603 RANP62826 216 aaKnown RBP16.17■□□□□ 0.18
RAB40B-207ENST00000572603 AMTNQ6UX39 209 aa16.17■□□□□ 0.18
RAB40B-207ENST00000572603 TMPRSS5Q9H3S3 457 aa16.17■□□□□ 0.18
RAB40B-207ENST00000572603 AAMDCQ9H7C9 122 aa16.17■□□□□ 0.18
RAB40B-207ENST00000572603 TMEM167BQ9NRX6 74 aa16.17■□□□□ 0.18
RAB40B-207ENST00000572603 RAB5CP51148 216 aa16.16■□□□□ 0.18
RAB40B-207ENST00000572603 FAM74A1Q5RGS3 127 aa16.16■□□□□ 0.18
RAB40B-207ENST00000572603 IGKV3-20P01619 116 aa16.15■□□□□ 0.18
RAB40B-207ENST00000572603 HIST1H1AQ02539 215 aaPredicted RBP16.15■□□□□ 0.18
RAB40B-207ENST00000572603 CSTL1Q9H114 145 aa16.15■□□□□ 0.18
RAB40B-207ENST00000572603 RETNQ9HD89 108 aa16.15■□□□□ 0.18
RAB40B-207ENST00000572603 OTORQ9NRC9 128 aa16.15■□□□□ 0.18
RAB40B-207ENST00000572603 STAB2Q8WWQ8 2551 aa16.14■□□□□ 0.17
RAB40B-207ENST00000572603 DUSP14O95147 198 aaKnown RBP16.14■□□□□ 0.17
RAB40B-207ENST00000572603 CA1P00915 261 aaPredicted RBP16.14■□□□□ 0.17
RAB40B-207ENST00000572603 MORN3Q6PF18 240 aaPredicted RBP16.14■□□□□ 0.17
RAB40B-207ENST00000572603 ALKAL2Q6UX46 152 aa16.14■□□□□ 0.17
RAB40B-207ENST00000572603 IQCF2Q8IXL9 164 aa16.14■□□□□ 0.17
RAB40B-207ENST00000572603 OR4B1Q8NGF8 309 aa16.14■□□□□ 0.17
RAB40B-207ENST00000572603 GGTLC3B5MD39 225 aa16.13■□□□□ 0.17
RAB40B-207ENST00000572603 NPIPB6E9PJ23 425 aa16.13■□□□□ 0.17
RAB40B-207ENST00000572603 UBE2CO00762 179 aa16.13■□□□□ 0.17
RAB40B-207ENST00000572603 SFT2D1Q8WV19 159 aa16.13■□□□□ 0.17
RAB40B-207ENST00000572603 SLC35B3Q9H1N7 401 aa16.13■□□□□ 0.17
RAB40B-207ENST00000572603 H2AFB1P0C5Y9 115 aa16.12■□□□□ 0.17
RAB40B-207ENST00000572603 NHLRC4P0CG21 123 aaPredicted RBP16.12■□□□□ 0.17
RAB40B-207ENST00000572603 DEFB135Q30KP9 77 aa16.12■□□□□ 0.17
RAB40B-207ENST00000572603 SPATA25Q9BR10 227 aa16.12■□□□□ 0.17
RAB40B-207ENST00000572603 YTHDF2Q9Y5A9 579 aaKnown RBP16.12■□□□□ 0.17
RAB40B-207ENST00000572603 IGKV2-40A0A087WW87 121 aaPredicted RBP16.11■□□□□ 0.17
RAB40B-207ENST00000572603 PGPA6NDG6 321 aa16.11■□□□□ 0.17
RAB40B-207ENST00000572603 IGKV2D-40P01614 121 aaPredicted RBP16.11■□□□□ 0.17
RAB40B-207ENST00000572603 Q6ZWC4 215 aa16.11■□□□□ 0.17
RAB40B-207ENST00000572603 A0A1B0GV50 99 aa16.1■□□□□ 0.17
RAB40B-207ENST00000572603 A0A1W2PRE2 83 aa16.1■□□□□ 0.17
RAB40B-207ENST00000572603 FXYD7P58549 80 aa16.1■□□□□ 0.17
RAB40B-207ENST00000572603 CSNK1G2-AS1Q8NCQ2 148 aa16.1■□□□□ 0.17
RAB40B-207ENST00000572603 OR10J6PQ8NGY7 276 aa16.1■□□□□ 0.17
RAB40B-207ENST00000572603 TRAV1-1A0A0B4J248 108 aa16.09■□□□□ 0.17
RAB40B-207ENST00000572603 DIRC3C9JPN6 131 aa16.09■□□□□ 0.17
RAB40B-207ENST00000572603 UBE2G2P60604 165 aa16.09■□□□□ 0.17
RAB40B-207ENST00000572603 ERCC8Q13216 396 aa16.09■□□□□ 0.17
RAB40B-207ENST00000572603 RNF183Q96D59 192 aa16.09■□□□□ 0.17
RAB40B-207ENST00000572603 OVOL2Q9BRP0 275 aa16.09■□□□□ 0.17
RAB40B-207ENST00000572603 FAM74A7A6NL05 159 aa16.08■□□□□ 0.16
RAB40B-207ENST00000572603 CT45A10P0DMU9 189 aa16.08■□□□□ 0.16
RAB40B-207ENST00000572603 NUTF2P61970 127 aaKnown RBP16.08■□□□□ 0.16
RAB40B-207ENST00000572603 GNG5P63218 68 aa16.08■□□□□ 0.16
RAB40B-207ENST00000572603 C9orf47Q6ZRZ4 202 aa16.08■□□□□ 0.16
RAB40B-207ENST00000572603 ARL6IP6Q8N6S5 226 aa16.08■□□□□ 0.16
RAB40B-207ENST00000572603 VGLL1Q99990 258 aa16.08■□□□□ 0.16
RAB40B-207ENST00000572603 TP53TG1Q9Y2A0 90 aa16.08■□□□□ 0.16
RAB40B-207ENST00000572603 M0R2Z0 102 aa16.07■□□□□ 0.16
RAB40B-207ENST00000572603 CRXO43186 299 aaPredicted RBP16.07■□□□□ 0.16
RAB40B-207ENST00000572603 CSN1S1P47710 185 aa16.07■□□□□ 0.16
RAB40B-207ENST00000572603 CCL20P78556 96 aa16.07■□□□□ 0.16
RAB40B-207ENST00000572603 SPINK13Q1W4C9 94 aa16.07■□□□□ 0.16
RAB40B-207ENST00000572603 C5orf17Q8NAS9 161 aa16.07■□□□□ 0.16
RAB40B-207ENST00000572603 RXFP4Q8TDU9 374 aa16.07■□□□□ 0.16
RAB40B-207ENST00000572603 ODF3Q96PU9 254 aa16.07■□□□□ 0.16
RAB40B-207ENST00000572603 AGPAT4-IT1Q9H0P7 198 aa16.07■□□□□ 0.16
RAB40B-207ENST00000572603 ZMAT4Q9H898 229 aa16.07■□□□□ 0.16
RAB40B-207ENST00000572603 XCL2Q9UBD3 114 aa16.07■□□□□ 0.16
RAB40B-207ENST00000572603 ARL2-SNX15V9GYD0 113 aa16.07■□□□□ 0.16
RAB40B-207ENST00000572603 RBAKDNA6NC62 111 aa16.06■□□□□ 0.16
RAB40B-207ENST00000572603 ZNF705EA8MWA4 302 aaPredicted RBP16.06■□□□□ 0.16
RAB40B-207ENST00000572603 SLC25A5P05141 298 aaKnown RBP16.06■□□□□ 0.16
RAB40B-207ENST00000572603 SUMO1P63165 101 aaKnown RBP16.06■□□□□ 0.16
RAB40B-207ENST00000572603 CMTM2Q8TAZ6 248 aa16.06■□□□□ 0.16
RAB40B-207ENST00000572603 FAM19A4Q96LR4 140 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms