RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 PPP1R1AQ13522 171 aa4.55□□□□□ -1.68
SMG6-204ENST00000570606 FCN2Q15485 313 aa4.55□□□□□ -1.68
SMG6-204ENST00000570606 PYDC2Q56P42 97 aa4.55□□□□□ -1.68
SMG6-204ENST00000570606 CYP2G1PQ6ZSU1 146 aa4.55□□□□□ -1.68
SMG6-204ENST00000570606 S100A7AQ86SG5 101 aa4.55□□□□□ -1.68
SMG6-204ENST00000570606 MAPKAPK5-AS1Q8N8E1 139 aa4.55□□□□□ -1.68
SMG6-204ENST00000570606 LRTM2Q8N967 370 aa4.55□□□□□ -1.68
SMG6-204ENST00000570606 OR8A1Q8NGG7 326 aa4.55□□□□□ -1.68
SMG6-204ENST00000570606 ZNRF2Q8NHG8 242 aa4.55□□□□□ -1.68
SMG6-204ENST00000570606 MCFD2Q8NI22 146 aa4.55□□□□□ -1.68
SMG6-204ENST00000570606 C16orf74Q96GX8 76 aa4.55□□□□□ -1.68
SMG6-204ENST00000570606 C17orf77Q96MU5 243 aa4.55□□□□□ -1.68
SMG6-204ENST00000570606 BCL7BQ9BQE9 202 aa4.55□□□□□ -1.68
SMG6-204ENST00000570606 SHANK2-AS3Q9BTD1 123 aa4.55□□□□□ -1.68
SMG6-204ENST00000570606 KRTAP4-5Q9BYR2 181 aa4.55□□□□□ -1.68
SMG6-204ENST00000570606 PLAC8L1A1L4L8 177 aa4.54□□□□□ -1.68
SMG6-204ENST00000570606 CBY3A6NI87 242 aa4.54□□□□□ -1.68
SMG6-204ENST00000570606 SSSCA1O60232 199 aa4.54□□□□□ -1.68
SMG6-204ENST00000570606 CDK2AP2O75956 126 aa4.54□□□□□ -1.68
SMG6-204ENST00000570606 PRB4P10163 310 aaPredicted RBP4.54□□□□□ -1.68
SMG6-204ENST00000570606 AZU1P20160 251 aa4.54□□□□□ -1.68
SMG6-204ENST00000570606 TNFSF8P32971 234 aa4.54□□□□□ -1.68
SMG6-204ENST00000570606 TMBIM6P55061 237 aa4.54□□□□□ -1.68
SMG6-204ENST00000570606 TAS2R60P59551 318 aa4.54□□□□□ -1.68
SMG6-204ENST00000570606 RRAS2P62070 204 aaPredicted RBP4.54□□□□□ -1.68
SMG6-204ENST00000570606 SELENOTP62341 195 aa4.54□□□□□ -1.68
SMG6-204ENST00000570606 PSG3Q16557 428 aa4.54□□□□□ -1.68
SMG6-204ENST00000570606 TTC32Q5I0X7 151 aa4.54□□□□□ -1.68
SMG6-204ENST00000570606 SUMO4Q6EEV6 95 aa4.54□□□□□ -1.68
SMG6-204ENST00000570606 TMEM182Q6ZP80 229 aaPredicted RBP4.54□□□□□ -1.68
SMG6-204ENST00000570606 SSX7Q7RTT5 188 aa4.54□□□□□ -1.68
SMG6-204ENST00000570606 TMEM144Q7Z5S9 345 aa4.54□□□□□ -1.68
SMG6-204ENST00000570606 OR10J6PQ8NGY7 276 aa4.54□□□□□ -1.68
SMG6-204ENST00000570606 TMEM263Q8WUH6 116 aaKnown RBP4.54□□□□□ -1.68
SMG6-204ENST00000570606 RPUSD4Q96CM3 377 aaKnown RBP4.54□□□□□ -1.68
SMG6-204ENST00000570606 UHRF2Q96PU4 802 aa4.54□□□□□ -1.68
SMG6-204ENST00000570606 SLC25A21Q9BQT8 299 aaPredicted RBP4.54□□□□□ -1.68
SMG6-204ENST00000570606 SLIRPQ9GZT3 109 aaKnown RBP4.54□□□□□ -1.68
SMG6-204ENST00000570606 NOP10Q9NPE3 64 aaKnown RBP4.54□□□□□ -1.68
SMG6-204ENST00000570606 PSENENQ9NZ42 101 aa4.54□□□□□ -1.68
SMG6-204ENST00000570606 LINC00588Q9Y4M8 146 aa4.54□□□□□ -1.68
SMG6-204ENST00000570606 TIMM8BQ9Y5J9 83 aaPredicted RBP4.54□□□□□ -1.68
SMG6-204ENST00000570606 APOBP04114 4563 aaKnown RBP4.53□□□□□ -1.68
SMG6-204ENST00000570606 A0A087X0K7 114 aa4.53□□□□□ -1.68
SMG6-204ENST00000570606 H3BMQ9 156 aa4.53□□□□□ -1.68
SMG6-204ENST00000570606 ADAP1O75689 374 aa4.53□□□□□ -1.68
SMG6-204ENST00000570606 CXCL2P19875 107 aa4.53□□□□□ -1.68
SMG6-204ENST00000570606 CXCL3P19876 107 aa4.53□□□□□ -1.68
SMG6-204ENST00000570606 ANXA7P20073 488 aaKnown RBP4.53□□□□□ -1.68
SMG6-204ENST00000570606 S100A5P33763 92 aa4.53□□□□□ -1.68
SMG6-204ENST00000570606 CDKN1BP46527 198 aa4.53□□□□□ -1.68
SMG6-204ENST00000570606 UBE2MP61081 183 aaKnown RBP4.53□□□□□ -1.68
SMG6-204ENST00000570606 POLR2GP62487 172 aaKnown RBP eCLIP4.53□□□□□ -1.68
SMG6-204ENST00000570606 DLK1P80370 383 aa4.53□□□□□ -1.68
SMG6-204ENST00000570606 SLC38A11Q08AI6 406 aa4.53□□□□□ -1.68
SMG6-204ENST00000570606 OR5I1Q13606 314 aa4.53□□□□□ -1.68
SMG6-204ENST00000570606 LCN15Q6UWW0 184 aa4.53□□□□□ -1.68
SMG6-204ENST00000570606 ZNF493Q6ZR52 646 aa4.53□□□□□ -1.68
SMG6-204ENST00000570606 SPATA12Q7Z6I5 190 aa4.53□□□□□ -1.68
SMG6-204ENST00000570606 CCDC190Q86UF4 302 aa4.53□□□□□ -1.68
SMG6-204ENST00000570606 RNASE8Q8TDE3 154 aaKnown RBP4.53□□□□□ -1.68
SMG6-204ENST00000570606 GNPNAT1Q96EK6 184 aaPredicted RBP4.53□□□□□ -1.68
SMG6-204ENST00000570606 SOSTQ9BQB4 213 aa4.53□□□□□ -1.68
SMG6-204ENST00000570606 ARL6Q9H0F7 186 aa4.53□□□□□ -1.68
SMG6-204ENST00000570606 ARV1Q9H2C2 271 aa4.53□□□□□ -1.68
SMG6-204ENST00000570606 RNF24Q9Y225 148 aa4.53□□□□□ -1.68
SMG6-204ENST00000570606 TRAV26-1A0A087WT03 109 aa4.52□□□□□ -1.69
SMG6-204ENST00000570606 A0A0J9YY99 117 aa4.52□□□□□ -1.69
SMG6-204ENST00000570606 SNURFLB1AK76 121 aa4.52□□□□□ -1.69
SMG6-204ENST00000570606 H7BYZ3 331 aa4.52□□□□□ -1.69
SMG6-204ENST00000570606 COX7A2P2O60397 106 aa4.52□□□□□ -1.69
SMG6-204ENST00000570606 CCNKO75909 580 aa4.52□□□□□ -1.69
SMG6-204ENST00000570606 SCGB1D1O95968 90 aa4.52□□□□□ -1.69
SMG6-204ENST00000570606 RLN2P04090 185 aa4.52□□□□□ -1.69
SMG6-204ENST00000570606 SNRPCP09234 159 aaKnown RBP4.52□□□□□ -1.69
SMG6-204ENST00000570606 METTL15P1P0C7V9 234 aa4.52□□□□□ -1.69
SMG6-204ENST00000570606 M6PRP20645 277 aa4.52□□□□□ -1.69
SMG6-204ENST00000570606 INPP1P49441 399 aa4.52□□□□□ -1.69
SMG6-204ENST00000570606 PLP1P60201 277 aa4.52□□□□□ -1.69
SMG6-204ENST00000570606 ZNF546Q86UE3 836 aa4.52□□□□□ -1.69
SMG6-204ENST00000570606 DEDD2Q8WXF8 326 aa4.52□□□□□ -1.69
SMG6-204ENST00000570606 SLC50A1Q9BRV3 221 aa4.52□□□□□ -1.69
SMG6-204ENST00000570606 V9GYH0 126 aa4.52□□□□□ -1.69
SMG6-204ENST00000570606 DMBT1Q9UGM3 2413 aaPredicted RBP4.51□□□□□ -1.69
SMG6-204ENST00000570606 C9orf170A2RU37 121 aa4.51□□□□□ -1.69
SMG6-204ENST00000570606 CCDC160A6NGH7 325 aa4.51□□□□□ -1.69
SMG6-204ENST00000570606 PMS2P5A8MQ11 134 aa4.51□□□□□ -1.69
SMG6-204ENST00000570606 FNDC10F2Z333 226 aa4.51□□□□□ -1.69
SMG6-204ENST00000570606 H3BTX0 84 aa4.51□□□□□ -1.69
SMG6-204ENST00000570606 GOSR2O14653 212 aa4.51□□□□□ -1.69
SMG6-204ENST00000570606 GAGE7O76087 117 aa4.51□□□□□ -1.69
SMG6-204ENST00000570606 GAGE12FP0CL80 117 aa4.51□□□□□ -1.69
SMG6-204ENST00000570606 GAGE12GP0CL81 117 aa4.51□□□□□ -1.69
SMG6-204ENST00000570606 GAGE12IP0CL82 117 aa4.51□□□□□ -1.69
SMG6-204ENST00000570606 FHL2Q14192 279 aa4.51□□□□□ -1.69
SMG6-204ENST00000570606 PXDC1Q5TGL8 231 aa4.51□□□□□ -1.69
SMG6-204ENST00000570606 GFI1BQ5VTD9 330 aa4.51□□□□□ -1.69
SMG6-204ENST00000570606 TRIQKQ629K1 86 aa4.51□□□□□ -1.69
SMG6-204ENST00000570606 LINC00305Q7Z4B0 112 aa4.51□□□□□ -1.69
SMG6-204ENST00000570606 BPIFA4PQ86YQ2 179 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms