RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 BANF2Q9H503 90 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 KLK5Q9Y337 293 aaPredicted RBP5.29□□□□□ -1.56
SMG1-217ENST00000569764 IGKV1-9A0A0C4DH69 117 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 NAP1L6A6NFF2 107 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 NAPSAO96009 420 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 LGALS1P09382 135 aaKnown RBP5.28□□□□□ -1.56
SMG1-217ENST00000569764 COL8A2P25067 703 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 HERVK_113P63121 156 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 ACP7Q6ZNF0 438 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 TMEM170AQ8WVE7 144 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 SPANXCQ9NY87 97 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 JMJD1CQ15652 2540 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 SDCBPO00560 298 aaPredicted RBP5.28□□□□□ -1.56
SMG1-217ENST00000569764 DPM2O94777 84 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 ATP5G3P48201 142 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 IL15RAQ13261 267 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 ZNF146Q15072 292 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 KLF17Q5JT82 389 aaPredicted RBP5.28□□□□□ -1.56
SMG1-217ENST00000569764 ZNF626Q68DY1 528 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 NEUROG1Q92886 237 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 CHST6Q9GZX3 395 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 KAAG1Q9UBP8 84 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 IGHV3OR16-10A0A075B7F0 116 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 TAS2R46P59540 309 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 KRTDAPP60985 99 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 DAZ2Q13117 558 aaKnown RBP5.28□□□□□ -1.56
SMG1-217ENST00000569764 DAZ4Q86SG3 579 aaKnown RBP5.28□□□□□ -1.56
SMG1-217ENST00000569764 TRPT1Q86TN4 253 aaKnown RBP5.28□□□□□ -1.56
SMG1-217ENST00000569764 KCNRGQ8N5I3 272 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 C1orf147Q96MC9 270 aaPredicted RBP5.28□□□□□ -1.56
SMG1-217ENST00000569764 RNF5Q99942 180 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 DAZ1Q9NQZ3 744 aaKnown RBP5.28□□□□□ -1.56
SMG1-217ENST00000569764 DAZ3Q9NR90 486 aaKnown RBP5.28□□□□□ -1.56
SMG1-217ENST00000569764 VSIG4Q9Y279 399 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 DSCAMO60469 2012 aa5.28□□□□□ -1.56
SMG1-217ENST00000569764 A0A0A6YYD4 124 aa5.27□□□□□ -1.57
SMG1-217ENST00000569764 PAX4O43316 350 aa5.27□□□□□ -1.57
SMG1-217ENST00000569764 QRFPP83859 136 aa5.27□□□□□ -1.57
SMG1-217ENST00000569764 OR11H6Q8NGC7 330 aa5.27□□□□□ -1.57
SMG1-217ENST00000569764 S100A16Q96FQ6 103 aaKnown RBP5.27□□□□□ -1.57
SMG1-217ENST00000569764 J3QQQ9 107 aa5.27□□□□□ -1.57
SMG1-217ENST00000569764 VSIG8P0DPA2 414 aa5.27□□□□□ -1.57
SMG1-217ENST00000569764 SMIM4Q8WVI0 70 aa5.27□□□□□ -1.57
SMG1-217ENST00000569764 GNB4Q9HAV0 340 aa5.27□□□□□ -1.57
SMG1-217ENST00000569764 USP9XQ93008 2570 aaPredicted RBP5.27□□□□□ -1.57
SMG1-217ENST00000569764 FAM181BA6NEQ2 426 aa5.27□□□□□ -1.57
SMG1-217ENST00000569764 TRIAP1O43715 76 aa5.27□□□□□ -1.57
SMG1-217ENST00000569764 PRH1P02810 166 aa5.27□□□□□ -1.57
SMG1-217ENST00000569764 RND3P61587 244 aa5.27□□□□□ -1.57
SMG1-217ENST00000569764 HBG1P69891 147 aa5.27□□□□□ -1.57
SMG1-217ENST00000569764 HBG2P69892 147 aa5.27□□□□□ -1.57
SMG1-217ENST00000569764 TTC9CQ8N5M4 171 aa5.27□□□□□ -1.57
SMG1-217ENST00000569764 FAM3DQ96BQ1 224 aa5.27□□□□□ -1.57
SMG1-217ENST00000569764 TRAV5A0A0B4J249 113 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 TRAV26-2A0A0B4J265 109 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 TAS2R19P59542 299 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 PAX8Q06710 450 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 TMEM187Q14656 261 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 C11orf87Q6NUJ2 197 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 NIPSNAP3BQ9BS92 247 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 SLC39A9Q9NUM3 307 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 HILPDAQ9Y5L2 63 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 ABCA1O95477 2261 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 LYNX1G3V0Z9 82 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 IGLV3-1P01715 115 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 LYNX1P0DP58 116 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 KRTAP10-9P60411 292 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 FOXL2NBQ6ZUU3 175 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 VMO1Q7Z5L0 202 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 LIME1Q9H400 295 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 SPCS1Q9Y6A9 102 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 HRNRQ86YZ3 2850 aaPredicted RBP5.26□□□□□ -1.57
SMG1-217ENST00000569764 TRAV8-4A0A0B4J246 113 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 PLAC8L1A1L4L8 177 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 GGTLC3B5MD39 225 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 CFPP27918 469 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 LAGE3Q14657 143 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 TMEM133Q9H2Q1 129 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 PARLQ9H300 379 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 POLQO75417 2590 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 ZNF727A8MUV8 499 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 DIRC3C9JPN6 131 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 FAM90A26D6RGX4 464 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.26□□□□□ -1.57
SMG1-217ENST00000569764 PGLYRP1O75594 196 aaPredicted RBP5.26□□□□□ -1.57
SMG1-217ENST00000569764 OSR1Q8TAX0 266 aaPredicted RBP5.26□□□□□ -1.57
SMG1-217ENST00000569764 CMTM2Q8TAZ6 248 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 SRSF12Q8WXF0 261 aaKnown RBP5.26□□□□□ -1.57
SMG1-217ENST00000569764 WDR61Q9GZS3 305 aaKnown RBP5.26□□□□□ -1.57
SMG1-217ENST00000569764 SLC35B3Q9H1N7 401 aa5.26□□□□□ -1.57
SMG1-217ENST00000569764 CELSR1Q9NYQ6 3014 aa5.25□□□□□ -1.57
SMG1-217ENST00000569764 GVQW1Q8N7I0 195 aa5.25□□□□□ -1.57
SMG1-217ENST00000569764 RFESDQ8TAC1 157 aa5.25□□□□□ -1.57
SMG1-217ENST00000569764 RTN4IP1Q8WWV3 396 aaPredicted RBP5.25□□□□□ -1.57
SMG1-217ENST00000569764 METTL26Q96S19 204 aa5.25□□□□□ -1.57
SMG1-217ENST00000569764 IGHV3-64DA0A0J9YX35 117 aa5.25□□□□□ -1.57
SMG1-217ENST00000569764 HLA-DRB1P01911 266 aa5.25□□□□□ -1.57
SMG1-217ENST00000569764 CD3DP04234 171 aa5.25□□□□□ -1.57
SMG1-217ENST00000569764 SLC25A6P12236 298 aa5.25□□□□□ -1.57
SMG1-217ENST00000569764 ZNF506Q5JVG8 444 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms