RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 ZNF705GA8MUZ8 300 aaPredicted RBP6.52□□□□□ -1.37
GTF3C1-210ENST00000569394 M0R3E3 92 aa6.52□□□□□ -1.37
GTF3C1-210ENST00000569394 OR7C2O60412 319 aa6.52□□□□□ -1.37
GTF3C1-210ENST00000569394 DUSP14O95147 198 aaKnown RBP6.52□□□□□ -1.37
GTF3C1-210ENST00000569394 IGLC2P0DOY2 106 aa6.52□□□□□ -1.37
GTF3C1-210ENST00000569394 ERCC8Q13216 396 aa6.52□□□□□ -1.37
GTF3C1-210ENST00000569394 KIR3DS1Q14943 382 aa6.52□□□□□ -1.37
GTF3C1-210ENST00000569394 OXA1LQ15070 435 aa6.52□□□□□ -1.37
GTF3C1-210ENST00000569394 SAMD13Q5VXD3 122 aa6.52□□□□□ -1.37
GTF3C1-210ENST00000569394 FAM122CQ6P4D5 195 aa6.52□□□□□ -1.37
GTF3C1-210ENST00000569394 C1orf158Q8N1D5 194 aa6.52□□□□□ -1.37
GTF3C1-210ENST00000569394 OR2T35Q8NGX2 323 aa6.52□□□□□ -1.37
GTF3C1-210ENST00000569394 PHLDA1Q8WV24 401 aaPredicted RBP6.52□□□□□ -1.37
GTF3C1-210ENST00000569394 SLC50A1Q9BRV3 221 aa6.52□□□□□ -1.37
GTF3C1-210ENST00000569394 HRH4Q9H3N8 390 aa6.52□□□□□ -1.37
GTF3C1-210ENST00000569394 ZNF331Q9NQX6 463 aaPredicted RBP6.52□□□□□ -1.37
GTF3C1-210ENST00000569394 RNF24Q9Y225 148 aa6.52□□□□□ -1.37
GTF3C1-210ENST00000569394 ZNF705EA8MWA4 302 aaPredicted RBP6.51□□□□□ -1.37
GTF3C1-210ENST00000569394 GIPP09681 153 aaPredicted RBP6.51□□□□□ -1.37
GTF3C1-210ENST00000569394 MIFP14174 115 aa6.51□□□□□ -1.37
GTF3C1-210ENST00000569394 RAB2AP61019 212 aa6.51□□□□□ -1.37
GTF3C1-210ENST00000569394 ICAM4Q14773 271 aa6.51□□□□□ -1.37
GTF3C1-210ENST00000569394 TMEM41BQ5BJD5 291 aa6.51□□□□□ -1.37
GTF3C1-210ENST00000569394 AMTNQ6UX39 209 aa6.51□□□□□ -1.37
GTF3C1-210ENST00000569394 OR10J6PQ8NGY7 276 aa6.51□□□□□ -1.37
GTF3C1-210ENST00000569394 SAT2Q96F10 170 aaPredicted RBP6.51□□□□□ -1.37
GTF3C1-210ENST00000569394 LINC01587Q99440 93 aa6.51□□□□□ -1.37
GTF3C1-210ENST00000569394 PAXXQ9BUH6 204 aa6.51□□□□□ -1.37
GTF3C1-210ENST00000569394 OR51M1Q9H341 326 aa6.51□□□□□ -1.37
GTF3C1-210ENST00000569394 RPH3ALQ9UNE2 315 aa6.51□□□□□ -1.37
GTF3C1-210ENST00000569394 FUT9Q9Y231 359 aa6.51□□□□□ -1.37
GTF3C1-210ENST00000569394 GOLT1BQ9Y3E0 138 aa6.51□□□□□ -1.37
GTF3C1-210ENST00000569394 TRBV19A0A075B6N1 114 aa6.5□□□□□ -1.37
GTF3C1-210ENST00000569394 IGKV2-40A0A087WW87 121 aaPredicted RBP6.5□□□□□ -1.37
GTF3C1-210ENST00000569394 BOLA2-SMG1P6H3BVE0 249 aa6.5□□□□□ -1.37
GTF3C1-210ENST00000569394 ARPC5O15511 151 aa6.5□□□□□ -1.37
GTF3C1-210ENST00000569394 NDUFB4O95168 129 aa6.5□□□□□ -1.37
GTF3C1-210ENST00000569394 IGKV2D-40P01614 121 aaPredicted RBP6.5□□□□□ -1.37
GTF3C1-210ENST00000569394 HIST1H1EP10412 219 aaKnown RBP6.5□□□□□ -1.37
GTF3C1-210ENST00000569394 HTN3P15516 51 aa6.5□□□□□ -1.37
GTF3C1-210ENST00000569394 RANP62826 216 aaKnown RBP6.5□□□□□ -1.37
GTF3C1-210ENST00000569394 CEMP1Q6PRD7 247 aaPredicted RBP6.5□□□□□ -1.37
GTF3C1-210ENST00000569394 Q6ZTC4 211 aa6.5□□□□□ -1.37
GTF3C1-210ENST00000569394 RPP25LQ8N5L8 163 aaKnown RBP6.5□□□□□ -1.37
GTF3C1-210ENST00000569394 INO80EQ8NBZ0 244 aaPredicted RBP6.5□□□□□ -1.37
GTF3C1-210ENST00000569394 FAM167A-AS1Q96KT0 104 aa6.5□□□□□ -1.37
GTF3C1-210ENST00000569394 HYLS1Q96M11 299 aa6.5□□□□□ -1.37
GTF3C1-210ENST00000569394 SH3BGRL3Q9H299 93 aa6.5□□□□□ -1.37
GTF3C1-210ENST00000569394 KCNIP2Q9NS61 270 aa6.5□□□□□ -1.37
GTF3C1-210ENST00000569394 TRAV12-3A0A0B4J271 114 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 LOC102723971A0A1B0GUV8 181 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 A0A1W2PPV4 95 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 IGLL5B9A064 214 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 CRXO43186 299 aaPredicted RBP6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 LY6G6CO95867 125 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 INSP01308 110 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 HBE1P02100 147 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 NBEAP1P0C6P0 100 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 CXCL2P19875 107 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 AZU1P20160 251 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 UBE2L3P68036 154 aaKnown RBP6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 RRN3P1Q2M238 152 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 RPL7L1Q6DKI1 246 aaKnown RBP6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 IQCF2Q8IXL9 164 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 OR10G4Q8NGN3 311 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 OR10G9Q8NGN4 311 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 OR10G7Q8NGN6 311 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 FXYD5Q96DB9 178 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 ZNF503Q96F45 646 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 PHYHIPLQ96FC7 376 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 IGF2BP2-AS1Q96M15 143 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 MRPL32Q9BYC8 188 aaKnown RBP6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 C11orf68Q9H3H3 251 aaKnown RBP6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 AAMDCQ9H7C9 122 aa6.49□□□□□ -1.37
GTF3C1-210ENST00000569394 CSMD3Q7Z407 3707 aa6.48□□□□□ -1.37
GTF3C1-210ENST00000569394 DYNC2H1Q8NCM8 4307 aaKnown RBP6.48□□□□□ -1.37
GTF3C1-210ENST00000569394 LCE6AA0A183 80 aa6.48□□□□□ -1.37
GTF3C1-210ENST00000569394 RNF222A6NCQ9 220 aa6.48□□□□□ -1.37
GTF3C1-210ENST00000569394 NUPR2A6NF83 97 aa6.48□□□□□ -1.37
GTF3C1-210ENST00000569394 CT45A10P0DMU9 189 aa6.48□□□□□ -1.37
GTF3C1-210ENST00000569394 ATP6V0CP27449 155 aa6.48□□□□□ -1.37
GTF3C1-210ENST00000569394 GUK1Q16774 197 aa6.48□□□□□ -1.37
GTF3C1-210ENST00000569394 C12orf74Q32Q52 190 aa6.48□□□□□ -1.37
GTF3C1-210ENST00000569394 ACOT6Q3I5F7 207 aaPredicted RBP6.48□□□□□ -1.37
GTF3C1-210ENST00000569394 FAM222AQ5U5X8 452 aa6.48□□□□□ -1.37
GTF3C1-210ENST00000569394 ZNF705AQ6ZN79 300 aaPredicted RBP6.48□□□□□ -1.37
GTF3C1-210ENST00000569394 AQP10Q96PS8 301 aa6.48□□□□□ -1.37
GTF3C1-210ENST00000569394 TMEM14CQ9P0S9 112 aa6.48□□□□□ -1.37
GTF3C1-210ENST00000569394 KLK5Q9Y337 293 aaPredicted RBP6.48□□□□□ -1.37
GTF3C1-210ENST00000569394 YTHDF2Q9Y5A9 579 aaKnown RBP6.48□□□□□ -1.37
GTF3C1-210ENST00000569394 SACSQ9NZJ4 4579 aa6.48□□□□□ -1.37
GTF3C1-210ENST00000569394 PLECQ15149 4684 aaKnown RBP6.47□□□□□ -1.37
GTF3C1-210ENST00000569394 TENM2Q9NT68 2774 aa6.47□□□□□ -1.37
GTF3C1-210ENST00000569394 G3V3Q6 166 aa6.47□□□□□ -1.37
GTF3C1-210ENST00000569394 JTBO76095 146 aa6.47□□□□□ -1.37
GTF3C1-210ENST00000569394 M6PRP20645 277 aa6.47□□□□□ -1.37
GTF3C1-210ENST00000569394 RNASE4P34096 147 aaKnown RBP6.47□□□□□ -1.37
GTF3C1-210ENST00000569394 CDKN1BP46527 198 aa6.47□□□□□ -1.37
GTF3C1-210ENST00000569394 ZNF266Q14584 549 aa6.47□□□□□ -1.37
GTF3C1-210ENST00000569394 KHDC3LQ587J8 217 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms