RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 IGHV4-30-4P0DP06 118 aa11.9□□□□□ -0.5
USB1-215ENST00000569252 ICAM4Q14773 271 aa11.9□□□□□ -0.5
USB1-215ENST00000569252 ACTL10Q5JWF8 245 aa11.9□□□□□ -0.5
USB1-215ENST00000569252 FOXI2Q6ZQN5 318 aa11.9□□□□□ -0.5
USB1-215ENST00000569252 SSX7Q7RTT5 188 aa11.9□□□□□ -0.5
USB1-215ENST00000569252 EXOC3-AS1Q8N2X6 119 aa11.9□□□□□ -0.5
USB1-215ENST00000569252 RPUSD4Q96CM3 377 aaKnown RBP11.9□□□□□ -0.5
USB1-215ENST00000569252 Q9H3A6 140 aa11.9□□□□□ -0.5
USB1-215ENST00000569252 OTORQ9NRC9 128 aa11.9□□□□□ -0.5
USB1-215ENST00000569252 TENM2Q9NT68 2774 aa11.9□□□□□ -0.5
USB1-215ENST00000569252 PPP1R14DQ9NXH3 145 aa11.9□□□□□ -0.5
USB1-215ENST00000569252 STAB2Q8WWQ8 2551 aa11.9□□□□□ -0.5
USB1-215ENST00000569252 SORL1Q92673 2214 aa11.89□□□□□ -0.51
USB1-215ENST00000569252 SLC17A3O00476 420 aa11.89□□□□□ -0.51
USB1-215ENST00000569252 NDUFB4O95168 129 aa11.89□□□□□ -0.51
USB1-215ENST00000569252 OR10J6PQ8NGY7 276 aa11.89□□□□□ -0.51
USB1-215ENST00000569252 MRPL53Q96EL3 112 aaKnown RBP11.89□□□□□ -0.51
USB1-215ENST00000569252 C20orf173Q96LM9 149 aa11.89□□□□□ -0.51
USB1-215ENST00000569252 WWC2-AS2Q96NR7 200 aa11.89□□□□□ -0.51
USB1-215ENST00000569252 TMPRSS5Q9H3S3 457 aa11.89□□□□□ -0.51
USB1-215ENST00000569252 C19orf73Q9NVV2 129 aa11.89□□□□□ -0.51
USB1-215ENST00000569252 LOC102724200A0A096LPH7 203 aaPredicted RBP11.88□□□□□ -0.51
USB1-215ENST00000569252 A0A1W2PRE2 83 aa11.88□□□□□ -0.51
USB1-215ENST00000569252 KNCNA6PVL3 124 aa11.88□□□□□ -0.51
USB1-215ENST00000569252 HLA-DMBP28068 263 aa11.88□□□□□ -0.51
USB1-215ENST00000569252 UBE2G2P60604 165 aa11.88□□□□□ -0.51
USB1-215ENST00000569252 NUTF2P61970 127 aaKnown RBP11.88□□□□□ -0.51
USB1-215ENST00000569252 ZNF680Q8NEM1 530 aa11.88□□□□□ -0.51
USB1-215ENST00000569252 OR4B1Q8NGF8 309 aa11.88□□□□□ -0.51
USB1-215ENST00000569252 SUN5Q8TC36 379 aa11.88□□□□□ -0.51
USB1-215ENST00000569252 WFDC10AQ9H1F0 79 aa11.88□□□□□ -0.51
USB1-215ENST00000569252 SAV1Q9H4B6 383 aaPredicted RBP11.88□□□□□ -0.51
USB1-215ENST00000569252 BIRC6Q9NR09 4857 aa11.88□□□□□ -0.51
USB1-215ENST00000569252 TRAV1-1A0A0B4J248 108 aa11.87□□□□□ -0.51
USB1-215ENST00000569252 A8MZ25 164 aa11.87□□□□□ -0.51
USB1-215ENST00000569252 IFNA1P01562 189 aa11.87□□□□□ -0.51
USB1-215ENST00000569252 APOC4P55056 127 aa11.87□□□□□ -0.51
USB1-215ENST00000569252 RAB14P61106 215 aa11.87□□□□□ -0.51
USB1-215ENST00000569252 ZNF124Q15973 351 aa11.87□□□□□ -0.51
USB1-215ENST00000569252 CST9LP1Q5W188 147 aa11.87□□□□□ -0.51
USB1-215ENST00000569252 DNAH7Q8WXX0 4024 aa11.87□□□□□ -0.51
USB1-215ENST00000569252 ZNF705FA8MVS1 300 aaPredicted RBP11.86□□□□□ -0.51
USB1-215ENST00000569252 K7EQM0 130 aa11.86□□□□□ -0.51
USB1-215ENST00000569252 SLC25A5P05141 298 aaKnown RBP11.86□□□□□ -0.51
USB1-215ENST00000569252 RPL35AP18077 110 aaKnown RBP11.86□□□□□ -0.51
USB1-215ENST00000569252 SUMO1P63165 101 aaKnown RBP11.86□□□□□ -0.51
USB1-215ENST00000569252 HIST1H1AQ02539 215 aaPredicted RBP11.86□□□□□ -0.51
USB1-215ENST00000569252 A0A0J9YX75 114 aa11.85□□□□□ -0.51
USB1-215ENST00000569252 F6UZH7 168 aa11.85□□□□□ -0.51
USB1-215ENST00000569252 IGKV3-20P01619 116 aa11.85□□□□□ -0.51
USB1-215ENST00000569252 HLA-DRB4P13762 266 aa11.85□□□□□ -0.51
USB1-215ENST00000569252 ARL6IP6Q8N6S5 226 aa11.85□□□□□ -0.51
USB1-215ENST00000569252 OR8A1Q8NGG7 326 aa11.85□□□□□ -0.51
USB1-215ENST00000569252 ASCL2Q99929 193 aa11.85□□□□□ -0.51
USB1-215ENST00000569252 B9D2Q9BPU9 175 aa11.85□□□□□ -0.51
USB1-215ENST00000569252 MANBALQ9NQG1 85 aa11.85□□□□□ -0.51
USB1-215ENST00000569252 GNG13Q9P2W3 67 aa11.85□□□□□ -0.51
USB1-215ENST00000569252 RPH3ALQ9UNE2 315 aa11.85□□□□□ -0.51
USB1-215ENST00000569252 HLA-DRB4X5D2U9 266 aa11.85□□□□□ -0.51
USB1-215ENST00000569252 F6UB75 175 aa11.84□□□□□ -0.51
USB1-215ENST00000569252 H3BMM0 161 aa11.84□□□□□ -0.51
USB1-215ENST00000569252 M0R3E3 92 aa11.84□□□□□ -0.51
USB1-215ENST00000569252 FRMD6-AS1P0C7T7 363 aa11.84□□□□□ -0.51
USB1-215ENST00000569252 TMEM78Q5T7P6 136 aa11.84□□□□□ -0.51
USB1-215ENST00000569252 MORN3Q6PF18 240 aaPredicted RBP11.84□□□□□ -0.51
USB1-215ENST00000569252 CSTL1Q9H114 145 aa11.84□□□□□ -0.51
USB1-215ENST00000569252 ARL2-SNX15V9GYD0 113 aa11.84□□□□□ -0.51
USB1-215ENST00000569252 SERTM2A0A1B0GWG4 89 aa11.83□□□□□ -0.52
USB1-215ENST00000569252 FAM74A7A6NL05 159 aa11.83□□□□□ -0.52
USB1-215ENST00000569252 PAGE4O60829 102 aa11.83□□□□□ -0.52
USB1-215ENST00000569252 TAGLN2P37802 199 aaKnown RBP11.83□□□□□ -0.52
USB1-215ENST00000569252 CNN1P51911 297 aaKnown RBP11.83□□□□□ -0.52
USB1-215ENST00000569252 C5orf17Q8NAS9 161 aa11.83□□□□□ -0.52
USB1-215ENST00000569252 LINC00477Q96M19 166 aa11.83□□□□□ -0.52
USB1-215ENST00000569252 CITED4Q96RK1 184 aa11.83□□□□□ -0.52
USB1-215ENST00000569252 KIR2DL5BA0A0G2JN68 375 aa11.82□□□□□ -0.52
USB1-215ENST00000569252 KIR2DL5BA0A0G2JPC4 375 aa11.82□□□□□ -0.52
USB1-215ENST00000569252 RBMY1BA6NDE4 496 aaKnown RBP11.82□□□□□ -0.52
USB1-215ENST00000569252 RBMY1EA6NEQ0 496 aaKnown RBP11.82□□□□□ -0.52
USB1-215ENST00000569252 DIRC3C9JPN6 131 aa11.82□□□□□ -0.52
USB1-215ENST00000569252 UBE2CO00762 179 aa11.82□□□□□ -0.52
USB1-215ENST00000569252 RBMY1DP0C7P1 496 aaKnown RBP11.82□□□□□ -0.52
USB1-215ENST00000569252 ZNF705DP0CH99 300 aaPredicted RBP11.82□□□□□ -0.52
USB1-215ENST00000569252 ZNF705BP0CI00 300 aaPredicted RBP11.82□□□□□ -0.52
USB1-215ENST00000569252 DEFB1P60022 68 aa11.82□□□□□ -0.52
USB1-215ENST00000569252 CCL20P78556 96 aa11.82□□□□□ -0.52
USB1-215ENST00000569252 GDF5OSQ5U4N7 250 aa11.82□□□□□ -0.52
USB1-215ENST00000569252 ZNF767PQ75MW2 155 aa11.82□□□□□ -0.52
USB1-215ENST00000569252 TRPT1Q86TN4 253 aaKnown RBP11.82□□□□□ -0.52
USB1-215ENST00000569252 KIR2DL5AQ8N109 375 aa11.82□□□□□ -0.52
USB1-215ENST00000569252 KIR2DL5BQ8NHK3 375 aa11.82□□□□□ -0.52
USB1-215ENST00000569252 TXNDC17Q9BRA2 123 aa11.82□□□□□ -0.52
USB1-215ENST00000569252 C1QTNF4Q9BXJ3 329 aa11.82□□□□□ -0.52
USB1-215ENST00000569252 EPDR1Q9UM22 224 aa11.82□□□□□ -0.52
USB1-215ENST00000569252 PRAC2D3DTV9 90 aa11.81□□□□□ -0.52
USB1-215ENST00000569252 TSPOP30536 169 aa11.81□□□□□ -0.52
USB1-215ENST00000569252 HIST1H2BAQ96A08 127 aa11.81□□□□□ -0.52
USB1-215ENST00000569252 CLUHP3Q96NS8 147 aa11.81□□□□□ -0.52
USB1-215ENST00000569252 TCEAL7Q9BRU2 100 aa11.81□□□□□ -0.52
USB1-215ENST00000569252 YTHDF2Q9Y5A9 579 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms