RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 UBE2E2Q96LR5 201 aa5.98□□□□□ -1.45
CDH11-216ENST00000569128 GGTLC1Q9BX51 225 aa5.98□□□□□ -1.45
CDH11-216ENST00000569128 ARV1Q9H2C2 271 aa5.98□□□□□ -1.45
CDH11-216ENST00000569128 SIGLEC8Q9NYZ4 499 aa5.98□□□□□ -1.45
CDH11-216ENST00000569128 SETD2Q9BYW2 2564 aaPredicted RBP5.98□□□□□ -1.45
CDH11-216ENST00000569128 FBN1P35555 2871 aaKnown RBP5.97□□□□□ -1.45
CDH11-216ENST00000569128 BORCS7-ASMTA0A0B4J1R7 106 aa5.97□□□□□ -1.45
CDH11-216ENST00000569128 A0A1B0GUS0 222 aa5.97□□□□□ -1.45
CDH11-216ENST00000569128 TAAR5O14804 337 aa5.97□□□□□ -1.45
CDH11-216ENST00000569128 TGOLN2O43493 480 aa5.97□□□□□ -1.45
CDH11-216ENST00000569128 EIF3GO75821 320 aaKnown RBP eCLIP5.97□□□□□ -1.45
CDH11-216ENST00000569128 LGALS1P09382 135 aaKnown RBP5.97□□□□□ -1.45
CDH11-216ENST00000569128 GCSAMLQ5JQS6 135 aa5.97□□□□□ -1.45
CDH11-216ENST00000569128 KLHL30-AS1Q8NEE0 82 aa5.97□□□□□ -1.45
CDH11-216ENST00000569128 TRGV9Q99603 122 aa5.97□□□□□ -1.45
CDH11-216ENST00000569128 GINS3Q9BRX5 216 aa5.97□□□□□ -1.45
CDH11-216ENST00000569128 NPCDR1Q9BY65 106 aa5.97□□□□□ -1.45
CDH11-216ENST00000569128 VSIRQ9H7M9 311 aa5.97□□□□□ -1.45
CDH11-216ENST00000569128 IGHV4-4A0A075B6R2 117 aa5.96□□□□□ -1.46
CDH11-216ENST00000569128 NUPL2O15504 423 aaKnown RBP5.96□□□□□ -1.46
CDH11-216ENST00000569128 ZNF207O43670 478 aaKnown RBP5.96□□□□□ -1.46
CDH11-216ENST00000569128 YIF1AO95070 293 aa5.96□□□□□ -1.46
CDH11-216ENST00000569128 ZNF266Q14584 549 aa5.96□□□□□ -1.46
CDH11-216ENST00000569128 TOMM20LQ6UXN7 152 aa5.96□□□□□ -1.46
CDH11-216ENST00000569128 PATE2Q6UY27 113 aa5.96□□□□□ -1.46
CDH11-216ENST00000569128 ADAMTSL5Q6ZMM2 481 aa5.96□□□□□ -1.46
CDH11-216ENST00000569128 SLC51BQ86UW2 128 aa5.96□□□□□ -1.46
CDH11-216ENST00000569128 C15orf54Q8N8G6 183 aa5.96□□□□□ -1.46
CDH11-216ENST00000569128 OR51G1Q8NGK1 321 aa5.96□□□□□ -1.46
CDH11-216ENST00000569128 C4orf3Q8WVX3 66 aa5.96□□□□□ -1.46
CDH11-216ENST00000569128 NIPSNAP3BQ9BS92 247 aa5.96□□□□□ -1.46
CDH11-216ENST00000569128 C20orf24Q9BUV8 137 aa5.96□□□□□ -1.46
CDH11-216ENST00000569128 PARD6GQ9BYG4 376 aaPredicted RBP5.96□□□□□ -1.46
CDH11-216ENST00000569128 DOK5Q9P104 306 aa5.96□□□□□ -1.46
CDH11-216ENST00000569128 TSSC4Q9Y5U2 329 aaPredicted RBP5.96□□□□□ -1.46
CDH11-216ENST00000569128 PUS1Q9Y606 427 aaKnown RBP eCLIP5.96□□□□□ -1.46
CDH11-216ENST00000569128 PXMP4Q9Y6I8 212 aa5.96□□□□□ -1.46
CDH11-216ENST00000569128 TRAV30A0A087WSZ9 112 aa5.95□□□□□ -1.46
CDH11-216ENST00000569128 GGCTO75223 188 aaKnown RBP5.95□□□□□ -1.46
CDH11-216ENST00000569128 HSPB1P04792 205 aaKnown RBP5.95□□□□□ -1.46
CDH11-216ENST00000569128 RD3LP0DJH9 198 aa5.95□□□□□ -1.46
CDH11-216ENST00000569128 TPT1P13693 172 aaKnown RBP5.95□□□□□ -1.46
CDH11-216ENST00000569128 RPL29P47914 159 aaKnown RBP5.95□□□□□ -1.46
CDH11-216ENST00000569128 RAB2AP61019 212 aa5.95□□□□□ -1.46
CDH11-216ENST00000569128 YPEL3P61236 119 aaPredicted RBP5.95□□□□□ -1.46
CDH11-216ENST00000569128 RPL36AP83881 106 aaKnown RBP5.95□□□□□ -1.46
CDH11-216ENST00000569128 IFITM2Q01629 132 aa5.95□□□□□ -1.46
CDH11-216ENST00000569128 ZNF616Q08AN1 781 aa5.95□□□□□ -1.46
CDH11-216ENST00000569128 FFAR4Q5NUL3 377 aa5.95□□□□□ -1.46
CDH11-216ENST00000569128 FAM74A1Q5RGS3 127 aa5.95□□□□□ -1.46
CDH11-216ENST00000569128 UNQ9165/PRO28630Q6UXU0 137 aa5.95□□□□□ -1.46
CDH11-216ENST00000569128 ZNF600Q6ZNG1 722 aa5.95□□□□□ -1.46
CDH11-216ENST00000569128 BAP18Q8IXM2 172 aa5.95□□□□□ -1.46
CDH11-216ENST00000569128 LINC01561Q8N1V8 128 aa5.95□□□□□ -1.46
CDH11-216ENST00000569128 OR11H1Q8NG94 326 aa5.95□□□□□ -1.46
CDH11-216ENST00000569128 OR1N2Q8NGR9 330 aa5.95□□□□□ -1.46
CDH11-216ENST00000569128 OR2G3Q8NGZ4 309 aa5.95□□□□□ -1.46
CDH11-216ENST00000569128 SPATA3Q8NHX4 192 aa5.95□□□□□ -1.46
CDH11-216ENST00000569128 STOML3Q8TAV4 291 aa5.95□□□□□ -1.46
CDH11-216ENST00000569128 TMEM158Q8WZ71 300 aa5.95□□□□□ -1.46
CDH11-216ENST00000569128 SLC39A9Q9NUM3 307 aa5.95□□□□□ -1.46
CDH11-216ENST00000569128 IGHV3-49A0A0A0MS15 119 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 TRBV7-9A0A0J9YWB2 115 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 WI2-2373I1.2A0A1W2PRP0 233 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 LINC01619G3V211 115 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 MPDU1O75352 247 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 IL4P05112 153 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 ORM2P19652 201 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 SYNJ2BPP57105 145 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 LYZP61626 148 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 B2MP61769 119 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 RAB31Q13636 194 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 USF2Q15853 346 aaPredicted RBP5.94□□□□□ -1.46
CDH11-216ENST00000569128 SPATA31B1PQ5VZV4 182 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 ALKAL2Q6UX46 152 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 C12orf54Q6X4T0 127 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 NDUFA11Q86Y39 141 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 ZNF709Q8N972 641 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 OR1B1Q8NGR6 318 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 Q8WTZ3 238 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 PBDC1Q9BVG4 233 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 TIMM9Q9Y5J7 89 aa5.94□□□□□ -1.46
CDH11-216ENST00000569128 IGHV3OR16-13A0A075B7E8 117 aa5.93□□□□□ -1.46
CDH11-216ENST00000569128 IGHV3-74A0A0B4J1X5 117 aa5.93□□□□□ -1.46
CDH11-216ENST00000569128 TRAV5A0A0B4J249 113 aa5.93□□□□□ -1.46
CDH11-216ENST00000569128 IGHV3-66A0A0C4DH42 116 aa5.93□□□□□ -1.46
CDH11-216ENST00000569128 C17orf112F2Z3M2 114 aa5.93□□□□□ -1.46
CDH11-216ENST00000569128 OR5G3P0C626 314 aa5.93□□□□□ -1.46
CDH11-216ENST00000569128 SEC11BP0C7V7 166 aa5.93□□□□□ -1.46
CDH11-216ENST00000569128 SELENOTP62341 195 aa5.93□□□□□ -1.46
CDH11-216ENST00000569128 RPEL1Q2QD12 228 aa5.93□□□□□ -1.46
CDH11-216ENST00000569128 SSX7Q7RTT5 188 aa5.93□□□□□ -1.46
CDH11-216ENST00000569128 GPHB5Q86YW7 130 aa5.93□□□□□ -1.46
CDH11-216ENST00000569128 C11orf52Q96A22 123 aa5.93□□□□□ -1.46
CDH11-216ENST00000569128 GNPNAT1Q96EK6 184 aaPredicted RBP5.93□□□□□ -1.46
CDH11-216ENST00000569128 RCHY1Q96PM5 261 aa5.93□□□□□ -1.46
CDH11-216ENST00000569128 PSMG3Q9BT73 122 aaPredicted RBP5.93□□□□□ -1.46
CDH11-216ENST00000569128 RPRMQ9NS64 109 aa5.93□□□□□ -1.46
CDH11-216ENST00000569128 MRPL27Q9P0M9 148 aaKnown RBP5.93□□□□□ -1.46
CDH11-216ENST00000569128 ATRQ13535 2644 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms