RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 SCGB3A2Q96PL1 93 aa5.77□□□□□ -1.49
SMG1-216ENST00000569122 RTBDNQ9BSG5 229 aaPredicted RBP5.77□□□□□ -1.49
SMG1-216ENST00000569122 ZNF331Q9NQX6 463 aaPredicted RBP5.77□□□□□ -1.49
SMG1-216ENST00000569122 COMMD3Q9UBI1 195 aa5.77□□□□□ -1.49
SMG1-216ENST00000569122 SHPKQ9UHJ6 478 aa5.77□□□□□ -1.49
SMG1-216ENST00000569122 PXMP4Q9Y6I8 212 aa5.77□□□□□ -1.49
SMG1-216ENST00000569122 TRAV8-6A0A0B4J262 113 aa5.76□□□□□ -1.49
SMG1-216ENST00000569122 IGHV3-53P01767 116 aa5.76□□□□□ -1.49
SMG1-216ENST00000569122 ANXA3P12429 323 aa5.76□□□□□ -1.49
SMG1-216ENST00000569122 GATA2P23769 480 aaPredicted RBP5.76□□□□□ -1.49
SMG1-216ENST00000569122 RPS19P39019 145 aaKnown RBP5.76□□□□□ -1.49
SMG1-216ENST00000569122 KRTAP10-4P60372 401 aaPredicted RBP5.76□□□□□ -1.49
SMG1-216ENST00000569122 FHL2Q14192 279 aa5.76□□□□□ -1.49
SMG1-216ENST00000569122 LAGE3Q14657 143 aa5.76□□□□□ -1.49
SMG1-216ENST00000569122 PXDC1Q5TGL8 231 aa5.76□□□□□ -1.49
SMG1-216ENST00000569122 CYP2G1PQ6ZSU1 146 aa5.76□□□□□ -1.49
SMG1-216ENST00000569122 BPIFA4PQ86YQ2 179 aa5.76□□□□□ -1.49
SMG1-216ENST00000569122 OR51S1Q8NGJ8 323 aa5.76□□□□□ -1.49
SMG1-216ENST00000569122 SLC25A31Q9H0C2 315 aa5.76□□□□□ -1.49
SMG1-216ENST00000569122 MTFP1Q9UDX5 166 aa5.76□□□□□ -1.49
SMG1-216ENST00000569122 RAB26Q9ULW5 256 aa5.76□□□□□ -1.49
SMG1-216ENST00000569122 COX11Q9Y6N1 276 aa5.76□□□□□ -1.49
SMG1-216ENST00000569122 FAT3Q8TDW7 4589 aa5.76□□□□□ -1.49
SMG1-216ENST00000569122 DNAH8Q96JB1 4490 aa5.76□□□□□ -1.49
SMG1-216ENST00000569122 C7orf71A4D174 169 aa5.75□□□□□ -1.49
SMG1-216ENST00000569122 PMS2P5A8MQ11 134 aa5.75□□□□□ -1.49
SMG1-216ENST00000569122 DISC1C4P0D8 188 aa5.75□□□□□ -1.49
SMG1-216ENST00000569122 J3KRW8 73 aa5.75□□□□□ -1.49
SMG1-216ENST00000569122 MPDU1O75352 247 aa5.75□□□□□ -1.49
SMG1-216ENST00000569122 SSBP1Q04837 148 aaKnown RBP5.75□□□□□ -1.49
SMG1-216ENST00000569122 ARPC5LQ9BPX5 153 aa5.75□□□□□ -1.49
SMG1-216ENST00000569122 SH3BGRL3Q9H299 93 aa5.75□□□□□ -1.49
SMG1-216ENST00000569122 Q9HAA7 133 aa5.75□□□□□ -1.49
SMG1-216ENST00000569122 DNAJC4Q9NNZ3 241 aa5.75□□□□□ -1.49
SMG1-216ENST00000569122 GPR132Q9UNW8 380 aa5.75□□□□□ -1.49
SMG1-216ENST00000569122 KLF12Q9Y4X4 402 aa5.75□□□□□ -1.49
SMG1-216ENST00000569122 TRAV8-3A0A0A6YYJ7 113 aa5.74□□□□□ -1.49
SMG1-216ENST00000569122 DUXBA0A1W2PPF3 345 aa5.74□□□□□ -1.49
SMG1-216ENST00000569122 RBFOX3A6NFN3 312 aa5.74□□□□□ -1.49
SMG1-216ENST00000569122 RGS13O14921 159 aa5.74□□□□□ -1.49
SMG1-216ENST00000569122 NMBP08949 121 aa5.74□□□□□ -1.49
SMG1-216ENST00000569122 LINC00869P0C866 280 aa5.74□□□□□ -1.49
SMG1-216ENST00000569122 CT45A10P0DMU9 189 aa5.74□□□□□ -1.49
SMG1-216ENST00000569122 PPT1P50897 306 aa5.74□□□□□ -1.49
SMG1-216ENST00000569122 RPL37AP61513 92 aaKnown RBP5.74□□□□□ -1.49
SMG1-216ENST00000569122 POLR2GP62487 172 aaKnown RBP eCLIP5.74□□□□□ -1.49
SMG1-216ENST00000569122 GUK1Q16774 197 aa5.74□□□□□ -1.49
SMG1-216ENST00000569122 TOR2AQ5JU69 321 aa5.74□□□□□ -1.49
SMG1-216ENST00000569122 MZT2AQ6P582 158 aa5.74□□□□□ -1.49
SMG1-216ENST00000569122 TEPPQ6URK8 271 aa5.74□□□□□ -1.49
SMG1-216ENST00000569122 TMEM182Q6ZP80 229 aaPredicted RBP5.74□□□□□ -1.49
SMG1-216ENST00000569122 OR52I2Q8NH67 350 aa5.74□□□□□ -1.49
SMG1-216ENST00000569122 CIRBP-AS1Q8TBR5 109 aa5.74□□□□□ -1.49
SMG1-216ENST00000569122 BLNKQ8WV28 456 aa5.74□□□□□ -1.49
SMG1-216ENST00000569122 NRG4Q8WWG1 115 aa5.74□□□□□ -1.49
SMG1-216ENST00000569122 LINC00477Q96M19 166 aa5.74□□□□□ -1.49
SMG1-216ENST00000569122 PARD6GQ9BYG4 376 aaPredicted RBP5.74□□□□□ -1.49
SMG1-216ENST00000569122 FAM25AB3EWG3 89 aa5.73□□□□□ -1.49
SMG1-216ENST00000569122 FAM25CB3EWG5 89 aa5.73□□□□□ -1.49
SMG1-216ENST00000569122 FAM25GB3EWG6 89 aa5.73□□□□□ -1.49
SMG1-216ENST00000569122 IGLV2-11P01706 119 aa5.73□□□□□ -1.49
SMG1-216ENST00000569122 PFN1P07737 140 aaKnown RBP5.73□□□□□ -1.49
SMG1-216ENST00000569122 IAPPP10997 89 aa5.73□□□□□ -1.49
SMG1-216ENST00000569122 SLC25A6P12236 298 aa5.73□□□□□ -1.49
SMG1-216ENST00000569122 IZUMO2Q6UXV1 221 aa5.73□□□□□ -1.49
SMG1-216ENST00000569122 Q6ZRU5 148 aa5.73□□□□□ -1.49
SMG1-216ENST00000569122 LYZL2Q7Z4W2 148 aa5.73□□□□□ -1.49
SMG1-216ENST00000569122 Q8N976 141 aa5.73□□□□□ -1.49
SMG1-216ENST00000569122 OR4D10Q8NGI6 311 aa5.73□□□□□ -1.49
SMG1-216ENST00000569122 OR10G4Q8NGN3 311 aa5.73□□□□□ -1.49
SMG1-216ENST00000569122 PRRT1Q99946 306 aa5.73□□□□□ -1.49
SMG1-216ENST00000569122 ARL6Q9H0F7 186 aa5.73□□□□□ -1.49
SMG1-216ENST00000569122 ARV1Q9H2C2 271 aa5.73□□□□□ -1.49
SMG1-216ENST00000569122 Q9H521 79 aa5.73□□□□□ -1.49
SMG1-216ENST00000569122 MRPL16Q9NX20 251 aaKnown RBP5.73□□□□□ -1.49
SMG1-216ENST00000569122 STRAPQ9Y3F4 350 aaKnown RBP5.73□□□□□ -1.49
SMG1-216ENST00000569122 LRP2P98164 4655 aa5.72□□□□□ -1.49
SMG1-216ENST00000569122 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.72□□□□□ -1.49
SMG1-216ENST00000569122 SMCO3A2RU48 225 aa5.72□□□□□ -1.49
SMG1-216ENST00000569122 FABP12A6NFH5 140 aa5.72□□□□□ -1.49
SMG1-216ENST00000569122 KLLNB2CW77 178 aa5.72□□□□□ -1.49
SMG1-216ENST00000569122 PRAC2D3DTV9 90 aa5.72□□□□□ -1.49
SMG1-216ENST00000569122 PRSS46E5RG02 174 aa5.72□□□□□ -1.49
SMG1-216ENST00000569122 MRPS12O15235 138 aaKnown RBP5.72□□□□□ -1.49
SMG1-216ENST00000569122 SYNGR2O43760 224 aa5.72□□□□□ -1.49
SMG1-216ENST00000569122 PITX3O75364 302 aa5.72□□□□□ -1.49
SMG1-216ENST00000569122 GPX1P07203 203 aa5.72□□□□□ -1.49
SMG1-216ENST00000569122 RNASE4P34096 147 aaKnown RBP5.72□□□□□ -1.49
SMG1-216ENST00000569122 MRPS10P82664 201 aaKnown RBP5.72□□□□□ -1.49
SMG1-216ENST00000569122 ZNF846Q147U1 533 aa5.72□□□□□ -1.49
SMG1-216ENST00000569122 C4orf48Q5BLP8 95 aa5.72□□□□□ -1.49
SMG1-216ENST00000569122 OR10J3Q5JRS4 329 aa5.72□□□□□ -1.49
SMG1-216ENST00000569122 SPANXN5Q5MJ07 72 aa5.72□□□□□ -1.49
SMG1-216ENST00000569122 NHLRC2Q8NBF2 726 aa5.72□□□□□ -1.49
SMG1-216ENST00000569122 HSD17B11Q8NBQ5 300 aa5.72□□□□□ -1.49
SMG1-216ENST00000569122 AP3S1Q92572 193 aa5.72□□□□□ -1.49
SMG1-216ENST00000569122 MRPL53Q96EL3 112 aaKnown RBP5.72□□□□□ -1.49
SMG1-216ENST00000569122 SCP2D1Q9UJQ7 156 aa5.72□□□□□ -1.49
SMG1-216ENST00000569122 IGHV1OR15-1A0A075B7D0 117 aa5.71□□□□□ -1.5
SMG1-216ENST00000569122 K7EPK0 472 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms