RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 TIMM8BQ9Y5J9 83 aaPredicted RBP13.28□□□□□ -0.28
SPSB3-210ENST00000568416 PXMP4Q9Y6I8 212 aa13.28□□□□□ -0.28
SPSB3-210ENST00000568416 TRAV5A0A0B4J249 113 aa13.27□□□□□ -0.29
SPSB3-210ENST00000568416 PVALBP20472 110 aaPredicted RBP13.27□□□□□ -0.29
SPSB3-210ENST00000568416 OR1L4Q8NGR5 311 aa13.27□□□□□ -0.29
SPSB3-210ENST00000568416 OR10J6PQ8NGY7 276 aa13.27□□□□□ -0.29
SPSB3-210ENST00000568416 TMEM263Q8WUH6 116 aaKnown RBP13.27□□□□□ -0.29
SPSB3-210ENST00000568416 LYRM2Q9NU23 88 aaPredicted RBP13.27□□□□□ -0.29
SPSB3-210ENST00000568416 IGSF23A1L1A6 192 aa13.26□□□□□ -0.29
SPSB3-210ENST00000568416 RPL29P47914 159 aaKnown RBP13.26□□□□□ -0.29
SPSB3-210ENST00000568416 SULT1A1P50225 295 aa13.26□□□□□ -0.29
SPSB3-210ENST00000568416 RAB32Q13637 225 aa13.26□□□□□ -0.29
SPSB3-210ENST00000568416 GUK1Q16774 197 aa13.26□□□□□ -0.29
SPSB3-210ENST00000568416 GFI1BQ5VTD9 330 aa13.26□□□□□ -0.29
SPSB3-210ENST00000568416 TMEM252Q8N6L7 170 aa13.26□□□□□ -0.29
SPSB3-210ENST00000568416 PFDN5Q99471 154 aa13.26□□□□□ -0.29
SPSB3-210ENST00000568416 DNAH11Q96DT5 4516 aa13.25□□□□□ -0.29
SPSB3-210ENST00000568416 S100A11P31949 105 aa13.25□□□□□ -0.29
SPSB3-210ENST00000568416 S100A10P60903 97 aa13.25□□□□□ -0.29
SPSB3-210ENST00000568416 CHAC2Q8WUX2 184 aa13.25□□□□□ -0.29
SPSB3-210ENST00000568416 ATG101Q9BSB4 218 aa13.25□□□□□ -0.29
SPSB3-210ENST00000568416 NOP10Q9NPE3 64 aaKnown RBP13.25□□□□□ -0.29
SPSB3-210ENST00000568416 SLC39A9Q9NUM3 307 aa13.25□□□□□ -0.29
SPSB3-210ENST00000568416 ZNF586Q9NXT0 402 aa13.25□□□□□ -0.29
SPSB3-210ENST00000568416 UBE2L5PA0A1B0GUS4 154 aa13.24□□□□□ -0.29
SPSB3-210ENST00000568416 FAM240BA0A1B0GVZ2 78 aa13.24□□□□□ -0.29
SPSB3-210ENST00000568416 NPIPB6E9PJ23 425 aa13.24□□□□□ -0.29
SPSB3-210ENST00000568416 ZNF253O75346 499 aa13.24□□□□□ -0.29
SPSB3-210ENST00000568416 NUDT3O95989 172 aa13.24□□□□□ -0.29
SPSB3-210ENST00000568416 BAXQ07812 192 aa13.24□□□□□ -0.29
SPSB3-210ENST00000568416 SOHLH1Q5JUK2 328 aa13.24□□□□□ -0.29
SPSB3-210ENST00000568416 LINC00612Q8N6U2 182 aa13.24□□□□□ -0.29
SPSB3-210ENST00000568416 ODF3Q96PU9 254 aa13.24□□□□□ -0.29
SPSB3-210ENST00000568416 CT45A10P0DMU9 189 aa13.23□□□□□ -0.29
SPSB3-210ENST00000568416 C1orf134Q5TEV5 83 aa13.23□□□□□ -0.29
SPSB3-210ENST00000568416 STX12Q86Y82 276 aa13.23□□□□□ -0.29
SPSB3-210ENST00000568416 ZNRF2Q8NHG8 242 aa13.23□□□□□ -0.29
SPSB3-210ENST00000568416 RNF141Q8WVD5 230 aa13.23□□□□□ -0.29
SPSB3-210ENST00000568416 PKD1P98161 4303 aa13.23□□□□□ -0.29
SPSB3-210ENST00000568416 MED14OSP0DP75 135 aa13.22□□□□□ -0.29
SPSB3-210ENST00000568416 LEPP41159 167 aa13.22□□□□□ -0.29
SPSB3-210ENST00000568416 HBG1P69891 147 aa13.22□□□□□ -0.29
SPSB3-210ENST00000568416 HBG2P69892 147 aa13.22□□□□□ -0.29
SPSB3-210ENST00000568416 ATP6V1FQ16864 119 aa13.22□□□□□ -0.29
SPSB3-210ENST00000568416 LINC00299Q6ZSB3 139 aa13.22□□□□□ -0.29
SPSB3-210ENST00000568416 TMEM14CQ9P0S9 112 aa13.22□□□□□ -0.29
SPSB3-210ENST00000568416 TRBV19A0A075B6N1 114 aa13.21□□□□□ -0.29
SPSB3-210ENST00000568416 FGF7P21781 194 aa13.21□□□□□ -0.29
SPSB3-210ENST00000568416 MZT2BQ6NZ67 158 aa13.21□□□□□ -0.29
SPSB3-210ENST00000568416 CCDC28AQ8IWP9 274 aa13.21□□□□□ -0.29
SPSB3-210ENST00000568416 MRPL53Q96EL3 112 aaKnown RBP13.21□□□□□ -0.29
SPSB3-210ENST00000568416 NACAE9PAV3 2078 aa13.2□□□□□ -0.3
SPSB3-210ENST00000568416 J3KRW8 73 aa13.2□□□□□ -0.3
SPSB3-210ENST00000568416 CCL18P55774 89 aa13.2□□□□□ -0.3
SPSB3-210ENST00000568416 ASAH1Q13510 395 aa13.2□□□□□ -0.3
SPSB3-210ENST00000568416 GPN1Q9HCN4 374 aaPredicted RBP13.2□□□□□ -0.3
SPSB3-210ENST00000568416 LINC00588Q9Y4M8 146 aa13.2□□□□□ -0.3
SPSB3-210ENST00000568416 TRAV12-3A0A0B4J271 114 aa13.19□□□□□ -0.3
SPSB3-210ENST00000568416 NBDYA0A0U1RRE5 68 aa13.19□□□□□ -0.3
SPSB3-210ENST00000568416 M0R3E3 92 aa13.19□□□□□ -0.3
SPSB3-210ENST00000568416 MPDU1O75352 247 aa13.19□□□□□ -0.3
SPSB3-210ENST00000568416 NDUFB4O95168 129 aa13.19□□□□□ -0.3
SPSB3-210ENST00000568416 HIST1H1EP10412 219 aaKnown RBP13.19□□□□□ -0.3
SPSB3-210ENST00000568416 NPCDR1Q9BY65 106 aa13.19□□□□□ -0.3
SPSB3-210ENST00000568416 PKHD1P08F94 4074 aa13.19□□□□□ -0.3
SPSB3-210ENST00000568416 PDE6HQ13956 83 aa13.18□□□□□ -0.3
SPSB3-210ENST00000568416 S100ZQ8WXG8 99 aa13.18□□□□□ -0.3
SPSB3-210ENST00000568416 PYGO2Q9BRQ0 406 aa13.18□□□□□ -0.3
SPSB3-210ENST00000568416 PRELID1Q9Y255 219 aa13.18□□□□□ -0.3
SPSB3-210ENST00000568416 GAGE12BA1L429 117 aa13.17□□□□□ -0.3
SPSB3-210ENST00000568416 SNURFLB1AK76 121 aa13.17□□□□□ -0.3
SPSB3-210ENST00000568416 GAGE7O76087 117 aa13.17□□□□□ -0.3
SPSB3-210ENST00000568416 RLN2P04090 185 aa13.17□□□□□ -0.3
SPSB3-210ENST00000568416 GAGE12FP0CL80 117 aa13.17□□□□□ -0.3
SPSB3-210ENST00000568416 GAGE12GP0CL81 117 aa13.17□□□□□ -0.3
SPSB3-210ENST00000568416 GAGE12IP0CL82 117 aa13.17□□□□□ -0.3
SPSB3-210ENST00000568416 PYYP10082 97 aa13.17□□□□□ -0.3
SPSB3-210ENST00000568416 HOXA5P20719 270 aa13.17□□□□□ -0.3
SPSB3-210ENST00000568416 NHLH2Q02577 135 aa13.17□□□□□ -0.3
SPSB3-210ENST00000568416 ERCC8Q13216 396 aa13.17□□□□□ -0.3
SPSB3-210ENST00000568416 GCSAMLQ5JQS6 135 aa13.17□□□□□ -0.3
SPSB3-210ENST00000568416 FAM19A4Q96LR4 140 aa13.17□□□□□ -0.3
SPSB3-210ENST00000568416 PCLOQ9Y6V0 5065 aa13.17□□□□□ -0.3
SPSB3-210ENST00000568416 TRAV26-1A0A087WT03 109 aa13.16□□□□□ -0.3
SPSB3-210ENST00000568416 SIX6O95475 246 aa13.16□□□□□ -0.3
SPSB3-210ENST00000568416 SLC25A5P05141 298 aaKnown RBP13.16□□□□□ -0.3
SPSB3-210ENST00000568416 M6PRP20645 277 aa13.16□□□□□ -0.3
SPSB3-210ENST00000568416 DAZ2Q13117 558 aaKnown RBP13.16□□□□□ -0.3
SPSB3-210ENST00000568416 OR5I1Q13606 314 aa13.16□□□□□ -0.3
SPSB3-210ENST00000568416 RXFP4Q8TDU9 374 aa13.16□□□□□ -0.3
SPSB3-210ENST00000568416 GNPNAT1Q96EK6 184 aaPredicted RBP13.16□□□□□ -0.3
SPSB3-210ENST00000568416 ZNF503Q96F45 646 aa13.16□□□□□ -0.3
SPSB3-210ENST00000568416 TIMM9Q9Y5J7 89 aa13.16□□□□□ -0.3
SPSB3-210ENST00000568416 C7orf71A4D174 169 aa13.15□□□□□ -0.3
SPSB3-210ENST00000568416 KLLNB2CW77 178 aa13.15□□□□□ -0.3
SPSB3-210ENST00000568416 CLINT1Q14677 625 aa13.15□□□□□ -0.3
SPSB3-210ENST00000568416 SSX7Q7RTT5 188 aa13.15□□□□□ -0.3
SPSB3-210ENST00000568416 ZNF575Q86XF7 245 aa13.15□□□□□ -0.3
SPSB3-210ENST00000568416 EXOC3-AS1Q8N2X6 119 aa13.15□□□□□ -0.3
SPSB3-210ENST00000568416 C6orf223Q8N319 242 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms