RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 LYRM2Q9NU23 88 aaPredicted RBP8.61□□□□□ -1.03
GTF3C1-208ENST00000567843 SLC39A9Q9NUM3 307 aa8.61□□□□□ -1.03
GTF3C1-208ENST00000567843 ZNF586Q9NXT0 402 aa8.61□□□□□ -1.03
GTF3C1-208ENST00000567843 RNF24Q9Y225 148 aa8.61□□□□□ -1.03
GTF3C1-208ENST00000567843 PKD1P98161 4303 aa8.61□□□□□ -1.03
GTF3C1-208ENST00000567843 TSPOP30536 169 aa8.6□□□□□ -1.03
GTF3C1-208ENST00000567843 GFI1BQ5VTD9 330 aa8.6□□□□□ -1.03
GTF3C1-208ENST00000567843 MZT2BQ6NZ67 158 aa8.6□□□□□ -1.03
GTF3C1-208ENST00000567843 LINC00336Q6ZUF6 198 aa8.6□□□□□ -1.03
GTF3C1-208ENST00000567843 STX12Q86Y82 276 aa8.6□□□□□ -1.03
GTF3C1-208ENST00000567843 OR1L4Q8NGR5 311 aa8.6□□□□□ -1.03
GTF3C1-208ENST00000567843 PXMP4Q9Y6I8 212 aa8.6□□□□□ -1.03
GTF3C1-208ENST00000567843 TRAV12-3A0A0B4J271 114 aa8.59□□□□□ -1.03
GTF3C1-208ENST00000567843 A0A1B0GVY2 172 aa8.59□□□□□ -1.03
GTF3C1-208ENST00000567843 M0R3E3 92 aa8.59□□□□□ -1.03
GTF3C1-208ENST00000567843 CT45A10P0DMU9 189 aa8.59□□□□□ -1.03
GTF3C1-208ENST00000567843 PYYP10082 97 aa8.59□□□□□ -1.03
GTF3C1-208ENST00000567843 S100A11P31949 105 aa8.59□□□□□ -1.03
GTF3C1-208ENST00000567843 RPL29P47914 159 aaKnown RBP8.59□□□□□ -1.03
GTF3C1-208ENST00000567843 NHLH2Q02577 135 aa8.59□□□□□ -1.03
GTF3C1-208ENST00000567843 VWC2Q2TAL6 325 aa8.59□□□□□ -1.03
GTF3C1-208ENST00000567843 LGALS9BQ3B8N2 356 aa8.59□□□□□ -1.03
GTF3C1-208ENST00000567843 LRRC37A5PQ49AS3 106 aa8.59□□□□□ -1.03
GTF3C1-208ENST00000567843 TMEM256Q8N2U0 113 aa8.59□□□□□ -1.03
GTF3C1-208ENST00000567843 THAP6Q8TBB0 222 aa8.59□□□□□ -1.03
GTF3C1-208ENST00000567843 ENKURQ8TC29 256 aa8.59□□□□□ -1.03
GTF3C1-208ENST00000567843 BLNKQ8WV28 456 aa8.59□□□□□ -1.03
GTF3C1-208ENST00000567843 C16orf74Q96GX8 76 aa8.59□□□□□ -1.03
GTF3C1-208ENST00000567843 ATG101Q9BSB4 218 aa8.59□□□□□ -1.03
GTF3C1-208ENST00000567843 KRTAP17-1Q9BYP8 105 aa8.59□□□□□ -1.03
GTF3C1-208ENST00000567843 H7BYZ3 331 aa8.58□□□□□ -1.04
GTF3C1-208ENST00000567843 ATP5G1P05496 136 aa8.58□□□□□ -1.04
GTF3C1-208ENST00000567843 ATP5G3P48201 142 aa8.58□□□□□ -1.04
GTF3C1-208ENST00000567843 HBG1P69891 147 aa8.58□□□□□ -1.04
GTF3C1-208ENST00000567843 HBG2P69892 147 aa8.58□□□□□ -1.04
GTF3C1-208ENST00000567843 ERCC8Q13216 396 aa8.58□□□□□ -1.04
GTF3C1-208ENST00000567843 ASAH1Q13510 395 aa8.58□□□□□ -1.04
GTF3C1-208ENST00000567843 RNF212Q495C1 297 aa8.58□□□□□ -1.04
GTF3C1-208ENST00000567843 Q6ZR54 194 aa8.58□□□□□ -1.04
GTF3C1-208ENST00000567843 PFDN5Q99471 154 aa8.58□□□□□ -1.04
GTF3C1-208ENST00000567843 OR5AC2Q9NZP5 309 aa8.58□□□□□ -1.04
GTF3C1-208ENST00000567843 TIMM8BQ9Y5J9 83 aaPredicted RBP8.58□□□□□ -1.04
GTF3C1-208ENST00000567843 GAGE12BA1L429 117 aa8.57□□□□□ -1.04
GTF3C1-208ENST00000567843 CBY3A6NI87 242 aa8.57□□□□□ -1.04
GTF3C1-208ENST00000567843 GAGE7O76087 117 aa8.57□□□□□ -1.04
GTF3C1-208ENST00000567843 GAGE12FP0CL80 117 aa8.57□□□□□ -1.04
GTF3C1-208ENST00000567843 GAGE12GP0CL81 117 aa8.57□□□□□ -1.04
GTF3C1-208ENST00000567843 GAGE12IP0CL82 117 aa8.57□□□□□ -1.04
GTF3C1-208ENST00000567843 IFITM3Q01628 133 aa8.57□□□□□ -1.04
GTF3C1-208ENST00000567843 OR5I1Q13606 314 aa8.57□□□□□ -1.04
GTF3C1-208ENST00000567843 CLINT1Q14677 625 aa8.57□□□□□ -1.04
GTF3C1-208ENST00000567843 ATP6V1FQ16864 119 aa8.57□□□□□ -1.04
GTF3C1-208ENST00000567843 EXOC3-AS1Q8N2X6 119 aa8.57□□□□□ -1.04
GTF3C1-208ENST00000567843 C15orf53Q8NAA6 179 aa8.57□□□□□ -1.04
GTF3C1-208ENST00000567843 OR5C1Q8NGR4 320 aa8.57□□□□□ -1.04
GTF3C1-208ENST00000567843 RNASE8Q8TDE3 154 aaKnown RBP8.57□□□□□ -1.04
GTF3C1-208ENST00000567843 TMEM263Q8WUH6 116 aaKnown RBP8.57□□□□□ -1.04
GTF3C1-208ENST00000567843 RNF141Q8WVD5 230 aa8.57□□□□□ -1.04
GTF3C1-208ENST00000567843 S100ZQ8WXG8 99 aa8.57□□□□□ -1.04
GTF3C1-208ENST00000567843 NACAE9PAV3 2078 aa8.57□□□□□ -1.04
GTF3C1-208ENST00000567843 TRBV19A0A075B6N1 114 aa8.56□□□□□ -1.04
GTF3C1-208ENST00000567843 A0A0J9YY99 117 aa8.56□□□□□ -1.04
GTF3C1-208ENST00000567843 NPIPB6E9PJ23 425 aa8.56□□□□□ -1.04
GTF3C1-208ENST00000567843 H0YIZ8 118 aa8.56□□□□□ -1.04
GTF3C1-208ENST00000567843 UPK1BO75841 260 aa8.56□□□□□ -1.04
GTF3C1-208ENST00000567843 NDUFB4O95168 129 aa8.56□□□□□ -1.04
GTF3C1-208ENST00000567843 LEPP41159 167 aa8.56□□□□□ -1.04
GTF3C1-208ENST00000567843 GUK1Q16774 197 aa8.56□□□□□ -1.04
GTF3C1-208ENST00000567843 ZNF493Q6ZR52 646 aa8.56□□□□□ -1.04
GTF3C1-208ENST00000567843 MIR17HGQ75NE6 70 aa8.56□□□□□ -1.04
GTF3C1-208ENST00000567843 CCDC28AQ8IWP9 274 aa8.56□□□□□ -1.04
GTF3C1-208ENST00000567843 NPCDR1Q9BY65 106 aa8.56□□□□□ -1.04
GTF3C1-208ENST00000567843 TIMM9Q9Y5J7 89 aa8.56□□□□□ -1.04
GTF3C1-208ENST00000567843 IGKV2-40A0A087WW87 121 aaPredicted RBP8.55□□□□□ -1.04
GTF3C1-208ENST00000567843 INMT-MINDY4F8WBC2 141 aa8.55□□□□□ -1.04
GTF3C1-208ENST00000567843 IGKV2D-40P01614 121 aaPredicted RBP8.55□□□□□ -1.04
GTF3C1-208ENST00000567843 HIST1H1EP10412 219 aaKnown RBP8.55□□□□□ -1.04
GTF3C1-208ENST00000567843 SLC25A2Q9BXI2 301 aa8.55□□□□□ -1.04
GTF3C1-208ENST00000567843 TRAV26-1A0A087WT03 109 aa8.54□□□□□ -1.04
GTF3C1-208ENST00000567843 SNURFLB1AK76 121 aa8.54□□□□□ -1.04
GTF3C1-208ENST00000567843 E5RGE8 158 aa8.54□□□□□ -1.04
GTF3C1-208ENST00000567843 EIF3GO75821 320 aaKnown RBP eCLIP8.54□□□□□ -1.04
GTF3C1-208ENST00000567843 RLN2P04090 185 aa8.54□□□□□ -1.04
GTF3C1-208ENST00000567843 HOXA5P20719 270 aa8.54□□□□□ -1.04
GTF3C1-208ENST00000567843 RNASE4P34096 147 aaKnown RBP8.54□□□□□ -1.04
GTF3C1-208ENST00000567843 CD300CQ08708 224 aa8.54□□□□□ -1.04
GTF3C1-208ENST00000567843 BTN1A1Q13410 526 aa8.54□□□□□ -1.04
GTF3C1-208ENST00000567843 ICAM4Q14773 271 aa8.54□□□□□ -1.04
GTF3C1-208ENST00000567843 C1orf134Q5TEV5 83 aa8.54□□□□□ -1.04
GTF3C1-208ENST00000567843 FAM122CQ6P4D5 195 aa8.54□□□□□ -1.04
GTF3C1-208ENST00000567843 C20orf144Q9BQM9 153 aa8.54□□□□□ -1.04
GTF3C1-208ENST00000567843 AGPAT4-IT1Q9H0P7 198 aa8.54□□□□□ -1.04
GTF3C1-208ENST00000567843 TMEM14CQ9P0S9 112 aa8.54□□□□□ -1.04
GTF3C1-208ENST00000567843 LINC00588Q9Y4M8 146 aa8.54□□□□□ -1.04
GTF3C1-208ENST00000567843 PCLOQ9Y6V0 5065 aa8.53□□□□□ -1.04
GTF3C1-208ENST00000567843 ZNF253O75346 499 aa8.53□□□□□ -1.04
GTF3C1-208ENST00000567843 OR10J4P0C629 311 aa8.53□□□□□ -1.04
GTF3C1-208ENST00000567843 SOHLH1Q5JUK2 328 aa8.53□□□□□ -1.04
GTF3C1-208ENST00000567843 Q6ZQT7 251 aa8.53□□□□□ -1.04
GTF3C1-208ENST00000567843 LINC00299Q6ZSB3 139 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms