RNA–Protein interactions for RNA: ENST00000567377.5

COMMD4-218, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-218ENST00000567377 LRRC37A5PQ49AS3 106 aa12.95□□□□□ -0.34
COMMD4-218ENST00000567377 BAP18Q8IXM2 172 aa12.95□□□□□ -0.34
COMMD4-218ENST00000567377 RPP25LQ8N5L8 163 aaKnown RBP12.95□□□□□ -0.34
COMMD4-218ENST00000567377 PPP1R1CQ8WVI7 109 aa12.95□□□□□ -0.34
COMMD4-218ENST00000567377 MRPL53Q96EL3 112 aaKnown RBP12.95□□□□□ -0.34
COMMD4-218ENST00000567377 LINC01587Q99440 93 aa12.95□□□□□ -0.34
COMMD4-218ENST00000567377 PRELID1Q9Y255 219 aa12.95□□□□□ -0.34
COMMD4-218ENST00000567377 TRAV5A0A0B4J249 113 aa12.94□□□□□ -0.34
COMMD4-218ENST00000567377 SLC17A3O00476 420 aa12.94□□□□□ -0.34
COMMD4-218ENST00000567377 H2BFSP57053 126 aa12.94□□□□□ -0.34
COMMD4-218ENST00000567377 ZNF493Q6ZR52 646 aa12.94□□□□□ -0.34
COMMD4-218ENST00000567377 ODF3Q96PU9 254 aa12.94□□□□□ -0.34
COMMD4-218ENST00000567377 OR5AC2Q9NZP5 309 aa12.94□□□□□ -0.34
COMMD4-218ENST00000567377 TRBV19A0A075B6N1 114 aa12.93□□□□□ -0.34
COMMD4-218ENST00000567377 TRAV12-2A0A075B6T6 113 aa12.93□□□□□ -0.34
COMMD4-218ENST00000567377 ZNF705GA8MUZ8 300 aaPredicted RBP12.93□□□□□ -0.34
COMMD4-218ENST00000567377 C17orf112F2Z3M2 114 aa12.93□□□□□ -0.34
COMMD4-218ENST00000567377 H0YIZ8 118 aa12.93□□□□□ -0.34
COMMD4-218ENST00000567377 H7BYZ3 331 aa12.93□□□□□ -0.34
COMMD4-218ENST00000567377 ZNF586Q9NXT0 402 aa12.93□□□□□ -0.34
COMMD4-218ENST00000567377 MPC2O95563 127 aa12.92□□□□□ -0.34
COMMD4-218ENST00000567377 SNRPCP09234 159 aaKnown RBP12.92□□□□□ -0.34
COMMD4-218ENST00000567377 THAP6Q8TBB0 222 aa12.92□□□□□ -0.34
COMMD4-218ENST00000567377 C16orf74Q96GX8 76 aa12.92□□□□□ -0.34
COMMD4-218ENST00000567377 WDR61Q9GZS3 305 aaKnown RBP12.92□□□□□ -0.34
COMMD4-218ENST00000567377 TIMM9Q9Y5J7 89 aa12.92□□□□□ -0.34
COMMD4-218ENST00000567377 VPS13DQ5THJ4 4388 aa12.91□□□□□ -0.34
COMMD4-218ENST00000567377 H3BTX0 84 aa12.91□□□□□ -0.34
COMMD4-218ENST00000567377 LEPP41159 167 aa12.91□□□□□ -0.34
COMMD4-218ENST00000567377 CLINT1Q14677 625 aa12.91□□□□□ -0.34
COMMD4-218ENST00000567377 ATP5SQ99766 215 aa12.91□□□□□ -0.34
COMMD4-218ENST00000567377 MRPL32Q9BYC8 188 aaKnown RBP12.91□□□□□ -0.34
COMMD4-218ENST00000567377 AAMDCQ9H7C9 122 aa12.91□□□□□ -0.34
COMMD4-218ENST00000567377 EPPK1P58107 5090 aaKnown RBP12.91□□□□□ -0.34
COMMD4-218ENST00000567377 NPIPB6E9PJ23 425 aa12.9□□□□□ -0.34
COMMD4-218ENST00000567377 POM121L12Q8N7R1 296 aa12.9□□□□□ -0.34
COMMD4-218ENST00000567377 PRAC2D3DTV9 90 aa12.89□□□□□ -0.35
COMMD4-218ENST00000567377 IFNA5P01569 189 aa12.89□□□□□ -0.35
COMMD4-218ENST00000567377 CCDC28AQ8IWP9 274 aa12.89□□□□□ -0.35
COMMD4-218ENST00000567377 TMEM263Q8WUH6 116 aaKnown RBP12.89□□□□□ -0.35
COMMD4-218ENST00000567377 LINC00477Q96M19 166 aa12.89□□□□□ -0.35
COMMD4-218ENST00000567377 HSPB11Q9Y547 144 aa12.89□□□□□ -0.35
COMMD4-218ENST00000567377 TIMM8BQ9Y5J9 83 aaPredicted RBP12.89□□□□□ -0.35
COMMD4-218ENST00000567377 RPL12P30050 165 aaKnown RBP12.88□□□□□ -0.35
COMMD4-218ENST00000567377 C15orf53Q8NAA6 179 aa12.88□□□□□ -0.35
COMMD4-218ENST00000567377 SCGB1C1Q8TD33 95 aa12.88□□□□□ -0.35
COMMD4-218ENST00000567377 OR51M1Q9H341 326 aa12.88□□□□□ -0.35
COMMD4-218ENST00000567377 FUT9Q9Y231 359 aa12.88□□□□□ -0.35
COMMD4-218ENST00000567377 NDUFB4O95168 129 aa12.87□□□□□ -0.35
COMMD4-218ENST00000567377 PTTG1O95997 202 aa12.87□□□□□ -0.35
COMMD4-218ENST00000567377 NBEAP1P0C6P0 100 aa12.87□□□□□ -0.35
COMMD4-218ENST00000567377 HTN1P15515 57 aa12.87□□□□□ -0.35
COMMD4-218ENST00000567377 HTN3P15516 51 aa12.87□□□□□ -0.35
COMMD4-218ENST00000567377 AZU1P20160 251 aa12.87□□□□□ -0.35
COMMD4-218ENST00000567377 GCSAMLQ5JQS6 135 aa12.87□□□□□ -0.35
COMMD4-218ENST00000567377 FAM167A-AS1Q96KT0 104 aa12.87□□□□□ -0.35
COMMD4-218ENST00000567377 SLC25A2Q9BXI2 301 aa12.87□□□□□ -0.35
COMMD4-218ENST00000567377 PARD6GQ9BYG4 376 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-218ENST00000567377 PLA2G2EQ9NZK7 142 aa12.87□□□□□ -0.35
COMMD4-218ENST00000567377 PLAC8L1A1L4L8 177 aa12.86□□□□□ -0.35
COMMD4-218ENST00000567377 CBY3A6NI87 242 aa12.86□□□□□ -0.35
COMMD4-218ENST00000567377 SLC25A5P05141 298 aaKnown RBP12.86□□□□□ -0.35
COMMD4-218ENST00000567377 CT45A10P0DMU9 189 aa12.86□□□□□ -0.35
COMMD4-218ENST00000567377 PYYP10082 97 aa12.86□□□□□ -0.35
COMMD4-218ENST00000567377 RNF212Q495C1 297 aa12.86□□□□□ -0.35
COMMD4-218ENST00000567377 GFI1BQ5VTD9 330 aa12.86□□□□□ -0.35
COMMD4-218ENST00000567377 RNASE8Q8TDE3 154 aaKnown RBP12.86□□□□□ -0.35
COMMD4-218ENST00000567377 BLNKQ8WV28 456 aa12.86□□□□□ -0.35
COMMD4-218ENST00000567377 PYGO2Q9BRQ0 406 aa12.86□□□□□ -0.35
COMMD4-218ENST00000567377 PAXXQ9BUH6 204 aa12.86□□□□□ -0.35
COMMD4-218ENST00000567377 BIRC6Q9NR09 4857 aa12.86□□□□□ -0.35
COMMD4-218ENST00000567377 DNAH6Q9C0G6 4158 aa12.85□□□□□ -0.35
COMMD4-218ENST00000567377 PRM2P04554 102 aa12.85□□□□□ -0.35
COMMD4-218ENST00000567377 ATP5G1P05496 136 aa12.85□□□□□ -0.35
COMMD4-218ENST00000567377 NMBP08949 121 aa12.85□□□□□ -0.35
COMMD4-218ENST00000567377 DEFB130BP0DP73 79 aa12.85□□□□□ -0.35
COMMD4-218ENST00000567377 DEFB130AP0DP74 79 aa12.85□□□□□ -0.35
COMMD4-218ENST00000567377 ATP5G3P48201 142 aa12.85□□□□□ -0.35
COMMD4-218ENST00000567377 TAS2R45P59539 299 aa12.85□□□□□ -0.35
COMMD4-218ENST00000567377 MIR17HGQ75NE6 70 aa12.85□□□□□ -0.35
COMMD4-218ENST00000567377 LYPD1Q8N2G4 141 aa12.85□□□□□ -0.35
COMMD4-218ENST00000567377 MBD2Q9UBB5 411 aa12.85□□□□□ -0.35
COMMD4-218ENST00000567377 M0R3E3 92 aa12.84□□□□□ -0.35
COMMD4-218ENST00000567377 C9orf47Q6ZRZ4 202 aa12.84□□□□□ -0.35
COMMD4-218ENST00000567377 RNF141Q8WVD5 230 aa12.84□□□□□ -0.35
COMMD4-218ENST00000567377 FAM3BP58499 235 aaPredicted RBP12.83□□□□□ -0.36
COMMD4-218ENST00000567377 ICAM4Q14773 271 aa12.83□□□□□ -0.36
COMMD4-218ENST00000567377 FFAR4Q5NUL3 377 aa12.83□□□□□ -0.36
COMMD4-218ENST00000567377 TMEM78Q5T7P6 136 aa12.83□□□□□ -0.36
COMMD4-218ENST00000567377 TMEM88Q6PEY1 159 aa12.83□□□□□ -0.36
COMMD4-218ENST00000567377 UBE2DNLQ8IWF7 75 aa12.83□□□□□ -0.36
COMMD4-218ENST00000567377 ALG5Q9Y673 324 aa12.83□□□□□ -0.36
COMMD4-218ENST00000567377 TRBV7-9A0A0J9YWB2 115 aa12.82□□□□□ -0.36
COMMD4-218ENST00000567377 C7orf71A4D174 169 aa12.82□□□□□ -0.36
COMMD4-218ENST00000567377 SNURFLB1AK76 121 aa12.82□□□□□ -0.36
COMMD4-218ENST00000567377 KLLNB2CW77 178 aa12.82□□□□□ -0.36
COMMD4-218ENST00000567377 OR7C2O60412 319 aa12.82□□□□□ -0.36
COMMD4-218ENST00000567377 PRB4P10163 310 aaPredicted RBP12.82□□□□□ -0.36
COMMD4-218ENST00000567377 CRISP2P16562 243 aa12.82□□□□□ -0.36
COMMD4-218ENST00000567377 CSN1S1P47710 185 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms