RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 A8MTW9 85 aa14.94□□□□□ -0.02
RNF40-210ENST00000566811 RPL35AP18077 110 aaKnown RBP14.94□□□□□ -0.02
RNF40-210ENST00000566811 ARL6IP6Q8N6S5 226 aa14.94□□□□□ -0.02
RNF40-210ENST00000566811 SUN5Q8TC36 379 aa14.94□□□□□ -0.02
RNF40-210ENST00000566811 RPUSD4Q96CM3 377 aaKnown RBP14.94□□□□□ -0.02
RNF40-210ENST00000566811 PHYHIPLQ96FC7 376 aa14.94□□□□□ -0.02
RNF40-210ENST00000566811 RYR3Q15413 4870 aa14.93□□□□□ -0.02
RNF40-210ENST00000566811 OR8A1Q8NGG7 326 aa14.93□□□□□ -0.02
RNF40-210ENST00000566811 OR10J6PQ8NGY7 276 aa14.93□□□□□ -0.02
RNF40-210ENST00000566811 TMED6Q8WW62 240 aa14.93□□□□□ -0.02
RNF40-210ENST00000566811 H3BTX0 84 aa14.92□□□□□ -0.02
RNF40-210ENST00000566811 SNRPCP09234 159 aaKnown RBP14.92□□□□□ -0.02
RNF40-210ENST00000566811 GCHFRP30047 84 aa14.92□□□□□ -0.02
RNF40-210ENST00000566811 COL7A1Q02388 2944 aa14.92□□□□□ -0.02
RNF40-210ENST00000566811 MAP1LC3B2A6NCE7 125 aa14.91□□□□□ -0.02
RNF40-210ENST00000566811 HMGB3O15347 200 aaKnown RBP14.91□□□□□ -0.02
RNF40-210ENST00000566811 CA1P00915 261 aaPredicted RBP14.91□□□□□ -0.02
RNF40-210ENST00000566811 AMBPP02760 352 aa14.91□□□□□ -0.02
RNF40-210ENST00000566811 CSN1S1P47710 185 aa14.91□□□□□ -0.02
RNF40-210ENST00000566811 ZNF726P1Q15940 193 aa14.91□□□□□ -0.02
RNF40-210ENST00000566811 GDF5OSQ5U4N7 250 aa14.91□□□□□ -0.02
RNF40-210ENST00000566811 IGFL4Q6B9Z1 124 aa14.91□□□□□ -0.02
RNF40-210ENST00000566811 RXFP4Q8TDU9 374 aa14.91□□□□□ -0.02
RNF40-210ENST00000566811 MAP1LC3BQ9GZQ8 125 aa14.91□□□□□ -0.02
RNF40-210ENST00000566811 Q9H3A6 140 aa14.91□□□□□ -0.02
RNF40-210ENST00000566811 OTORQ9NRC9 128 aa14.91□□□□□ -0.02
RNF40-210ENST00000566811 HLA-DMBP28068 263 aa14.9□□□□□ -0.02
RNF40-210ENST00000566811 CNN1P51911 297 aaKnown RBP14.9□□□□□ -0.02
RNF40-210ENST00000566811 ICAM4Q14773 271 aa14.9□□□□□ -0.02
RNF40-210ENST00000566811 OR4B1Q8NGF8 309 aa14.9□□□□□ -0.02
RNF40-210ENST00000566811 ASCL2Q99929 193 aa14.9□□□□□ -0.02
RNF40-210ENST00000566811 ARL2-SNX15V9GYD0 113 aa14.9□□□□□ -0.02
RNF40-210ENST00000566811 DNAH9Q9NYC9 4486 aa14.9□□□□□ -0.02
RNF40-210ENST00000566811 F6UB75 175 aa14.89□□□□□ -0.03
RNF40-210ENST00000566811 TEX46H3BTG2 121 aa14.89□□□□□ -0.03
RNF40-210ENST00000566811 RANP62826 216 aaKnown RBP14.89□□□□□ -0.03
RNF40-210ENST00000566811 FAM213BQ8TBF2 198 aa14.89□□□□□ -0.03
RNF40-210ENST00000566811 ODF3Q96PU9 254 aa14.89□□□□□ -0.03
RNF40-210ENST00000566811 NKX6-2Q9C056 277 aaPredicted RBP14.89□□□□□ -0.03
RNF40-210ENST00000566811 RBAKDNA6NC62 111 aa14.88□□□□□ -0.03
RNF40-210ENST00000566811 SULT1A2P50226 295 aa14.88□□□□□ -0.03
RNF40-210ENST00000566811 HIST1H1AQ02539 215 aaPredicted RBP14.88□□□□□ -0.03
RNF40-210ENST00000566811 SSX7Q7RTT5 188 aa14.88□□□□□ -0.03
RNF40-210ENST00000566811 EXOC3-AS1Q8N2X6 119 aa14.88□□□□□ -0.03
RNF40-210ENST00000566811 CMTM2Q8TAZ6 248 aa14.88□□□□□ -0.03
RNF40-210ENST00000566811 MBD3L1Q8WWY6 194 aa14.88□□□□□ -0.03
RNF40-210ENST00000566811 RCHY1Q96PM5 261 aa14.88□□□□□ -0.03
RNF40-210ENST00000566811 SERTM2A0A1B0GWG4 89 aa14.87□□□□□ -0.03
RNF40-210ENST00000566811 A0A1W2PRE2 83 aa14.87□□□□□ -0.03
RNF40-210ENST00000566811 NPIPB6E9PJ23 425 aa14.87□□□□□ -0.03
RNF40-210ENST00000566811 SLC25A5P05141 298 aaKnown RBP14.87□□□□□ -0.03
RNF40-210ENST00000566811 PPT1P50897 306 aa14.87□□□□□ -0.03
RNF40-210ENST00000566811 NKX2-5P52952 324 aaPredicted RBP14.87□□□□□ -0.03
RNF40-210ENST00000566811 IQCF2Q8IXL9 164 aa14.87□□□□□ -0.03
RNF40-210ENST00000566811 RNF183Q96D59 192 aa14.87□□□□□ -0.03
RNF40-210ENST00000566811 ZNF705FA8MVS1 300 aaPredicted RBP14.86□□□□□ -0.03
RNF40-210ENST00000566811 M0R3E3 92 aa14.86□□□□□ -0.03
RNF40-210ENST00000566811 H2AFB1P0C5Y9 115 aa14.86□□□□□ -0.03
RNF40-210ENST00000566811 DEFB135Q30KP9 77 aa14.86□□□□□ -0.03
RNF40-210ENST00000566811 AMTNQ6UX39 209 aa14.86□□□□□ -0.03
RNF40-210ENST00000566811 TCEAL7Q9BRU2 100 aa14.86□□□□□ -0.03
RNF40-210ENST00000566811 PPP1R14DQ9NXH3 145 aa14.86□□□□□ -0.03
RNF40-210ENST00000566811 BOLA2-SMG1P6H3BVE0 249 aa14.85□□□□□ -0.03
RNF40-210ENST00000566811 SPRY2O43597 315 aa14.85□□□□□ -0.03
RNF40-210ENST00000566811 EIF3GO75821 320 aaKnown RBP eCLIP14.85□□□□□ -0.03
RNF40-210ENST00000566811 HBE1P02100 147 aa14.85□□□□□ -0.03
RNF40-210ENST00000566811 TSPOP30536 169 aa14.85□□□□□ -0.03
RNF40-210ENST00000566811 DEFB1P60022 68 aa14.85□□□□□ -0.03
RNF40-210ENST00000566811 C5orf17Q8NAS9 161 aa14.85□□□□□ -0.03
RNF40-210ENST00000566811 LINC00477Q96M19 166 aa14.85□□□□□ -0.03
RNF40-210ENST00000566811 U3KQK5 164 aa14.85□□□□□ -0.03
RNF40-210ENST00000566811 STAB2Q8WWQ8 2551 aa14.84□□□□□ -0.03
RNF40-210ENST00000566811 TRAV1-1A0A0B4J248 108 aa14.84□□□□□ -0.03
RNF40-210ENST00000566811 TRBV7-9A0A0J9YWB2 115 aa14.84□□□□□ -0.03
RNF40-210ENST00000566811 IGKV3-20P01619 116 aa14.84□□□□□ -0.03
RNF40-210ENST00000566811 FHITP49789 147 aa14.84□□□□□ -0.03
RNF40-210ENST00000566811 TMEM78Q5T7P6 136 aa14.84□□□□□ -0.03
RNF40-210ENST00000566811 C9orf47Q6ZRZ4 202 aa14.84□□□□□ -0.03
RNF40-210ENST00000566811 SFT2D1Q8WV19 159 aa14.84□□□□□ -0.03
RNF40-210ENST00000566811 PGPA6NDG6 321 aa14.83□□□□□ -0.04
RNF40-210ENST00000566811 PRAC2D3DTV9 90 aa14.83□□□□□ -0.04
RNF40-210ENST00000566811 GIG44P09565 113 aaPredicted RBP14.83□□□□□ -0.04
RNF40-210ENST00000566811 FGF8P55075 233 aaPredicted RBP14.83□□□□□ -0.04
RNF40-210ENST00000566811 OVOL2Q9BRP0 275 aa14.83□□□□□ -0.04
RNF40-210ENST00000566811 PLA2G2EQ9NZK7 142 aa14.83□□□□□ -0.04
RNF40-210ENST00000566811 TENM3Q9P273 2699 aa14.83□□□□□ -0.04
RNF40-210ENST00000566811 FBLL1A6NHQ2 334 aaKnown RBP14.82□□□□□ -0.04
RNF40-210ENST00000566811 DIRC3C9JPN6 131 aa14.82□□□□□ -0.04
RNF40-210ENST00000566811 K7EQM0 130 aa14.82□□□□□ -0.04
RNF40-210ENST00000566811 LEPP41159 167 aa14.82□□□□□ -0.04
RNF40-210ENST00000566811 CDKN1BP46527 198 aa14.82□□□□□ -0.04
RNF40-210ENST00000566811 C20orf144Q9BQM9 153 aa14.82□□□□□ -0.04
RNF40-210ENST00000566811 LENEPQ9Y5L5 61 aa14.82□□□□□ -0.04
RNF40-210ENST00000566811 INSP01308 110 aa14.81□□□□□ -0.04
RNF40-210ENST00000566811 NMBP08949 121 aa14.81□□□□□ -0.04
RNF40-210ENST00000566811 ZNF705DP0CH99 300 aaPredicted RBP14.81□□□□□ -0.04
RNF40-210ENST00000566811 ZNF705BP0CI00 300 aaPredicted RBP14.81□□□□□ -0.04
RNF40-210ENST00000566811 CSNK1G2-AS1Q8NCQ2 148 aa14.81□□□□□ -0.04
RNF40-210ENST00000566811 IGF2BP2-AS1Q96M15 143 aa14.81□□□□□ -0.04
RNF40-210ENST00000566811 SLC35B3Q9H1N7 401 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms