RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 DAD1P61803 113 aa7.24□□□□□ -1.25
GTF3C1-206ENST00000566779 IFITM3Q01628 133 aa7.24□□□□□ -1.25
GTF3C1-206ENST00000566779 AMTNQ6UX39 209 aa7.24□□□□□ -1.25
GTF3C1-206ENST00000566779 UBE2DNLQ8IWF7 75 aa7.24□□□□□ -1.25
GTF3C1-206ENST00000566779 OR1L4Q8NGR5 311 aa7.24□□□□□ -1.25
GTF3C1-206ENST00000566779 TMEM37Q8WXS4 190 aa7.24□□□□□ -1.25
GTF3C1-206ENST00000566779 IGF2BP2-AS1Q96M15 143 aa7.24□□□□□ -1.25
GTF3C1-206ENST00000566779 NEU1Q99519 415 aa7.24□□□□□ -1.25
GTF3C1-206ENST00000566779 SLC50A1Q9BRV3 221 aa7.24□□□□□ -1.25
GTF3C1-206ENST00000566779 NIPSNAP3BQ9BS92 247 aa7.24□□□□□ -1.25
GTF3C1-206ENST00000566779 NDUFAF3Q9BU61 184 aa7.24□□□□□ -1.25
GTF3C1-206ENST00000566779 SLC39A9Q9NUM3 307 aa7.24□□□□□ -1.25
GTF3C1-206ENST00000566779 OR5AC2Q9NZP5 309 aa7.24□□□□□ -1.25
GTF3C1-206ENST00000566779 APLNQ9ULZ1 77 aa7.24□□□□□ -1.25
GTF3C1-206ENST00000566779 PXMP4Q9Y6I8 212 aa7.24□□□□□ -1.25
GTF3C1-206ENST00000566779 EPPK1P58107 5090 aaKnown RBP7.24□□□□□ -1.25
GTF3C1-206ENST00000566779 AMBPP02760 352 aa7.23□□□□□ -1.25
GTF3C1-206ENST00000566779 DEFB130BP0DP73 79 aa7.23□□□□□ -1.25
GTF3C1-206ENST00000566779 DEFB130AP0DP74 79 aa7.23□□□□□ -1.25
GTF3C1-206ENST00000566779 S100A11P31949 105 aa7.23□□□□□ -1.25
GTF3C1-206ENST00000566779 GCSAMLQ5JQS6 135 aa7.23□□□□□ -1.25
GTF3C1-206ENST00000566779 LINC00299Q6ZSB3 139 aa7.23□□□□□ -1.25
GTF3C1-206ENST00000566779 NUDT10Q8NFP7 164 aa7.23□□□□□ -1.25
GTF3C1-206ENST00000566779 OR5C1Q8NGR4 320 aa7.23□□□□□ -1.25
GTF3C1-206ENST00000566779 OR10J6PQ8NGY7 276 aa7.23□□□□□ -1.25
GTF3C1-206ENST00000566779 BLNKQ8WV28 456 aa7.23□□□□□ -1.25
GTF3C1-206ENST00000566779 NUDT11Q96G61 164 aa7.23□□□□□ -1.25
GTF3C1-206ENST00000566779 LINC01587Q99440 93 aa7.23□□□□□ -1.25
GTF3C1-206ENST00000566779 PFDN5Q99471 154 aa7.23□□□□□ -1.25
GTF3C1-206ENST00000566779 C11orf1Q9H5F2 150 aa7.23□□□□□ -1.25
GTF3C1-206ENST00000566779 DNAJC4Q9NNZ3 241 aa7.23□□□□□ -1.25
GTF3C1-206ENST00000566779 ZNF331Q9NQX6 463 aaPredicted RBP7.23□□□□□ -1.25
GTF3C1-206ENST00000566779 DKK2Q9UBU2 259 aa7.23□□□□□ -1.25
GTF3C1-206ENST00000566779 TEX48A0A1B0GUV7 120 aa7.22□□□□□ -1.25
GTF3C1-206ENST00000566779 PRAC2D3DTV9 90 aa7.22□□□□□ -1.25
GTF3C1-206ENST00000566779 H3BQ15 152 aa7.22□□□□□ -1.25
GTF3C1-206ENST00000566779 MRPS12O15235 138 aaKnown RBP7.22□□□□□ -1.25
GTF3C1-206ENST00000566779 PRAF2O60831 178 aa7.22□□□□□ -1.25
GTF3C1-206ENST00000566779 PLA2G1BP04054 148 aaKnown RBP7.22□□□□□ -1.25
GTF3C1-206ENST00000566779 PYYP10082 97 aa7.22□□□□□ -1.25
GTF3C1-206ENST00000566779 CXCL2P19875 107 aa7.22□□□□□ -1.25
GTF3C1-206ENST00000566779 MALP21145 153 aa7.22□□□□□ -1.25
GTF3C1-206ENST00000566779 TCTAP57738 103 aa7.22□□□□□ -1.25
GTF3C1-206ENST00000566779 NHLH2Q02577 135 aa7.22□□□□□ -1.25
GTF3C1-206ENST00000566779 RNF126Q9BV68 326 aa7.22□□□□□ -1.25
GTF3C1-206ENST00000566779 NPCDR1Q9BY65 106 aa7.22□□□□□ -1.25
GTF3C1-206ENST00000566779 SMIM3Q9BZL3 60 aa7.22□□□□□ -1.25
GTF3C1-206ENST00000566779 SLC25A31Q9H0C2 315 aa7.22□□□□□ -1.25
GTF3C1-206ENST00000566779 A8MTW9 85 aa7.21□□□□□ -1.26
GTF3C1-206ENST00000566779 E5RGE8 158 aa7.21□□□□□ -1.26
GTF3C1-206ENST00000566779 CRXO43186 299 aaPredicted RBP7.21□□□□□ -1.26
GTF3C1-206ENST00000566779 IGLC2P0DOY2 106 aa7.21□□□□□ -1.26
GTF3C1-206ENST00000566779 IL15RAQ13261 267 aa7.21□□□□□ -1.26
GTF3C1-206ENST00000566779 ATP6V1FQ16864 119 aa7.21□□□□□ -1.26
GTF3C1-206ENST00000566779 VWC2Q2TAL6 325 aa7.21□□□□□ -1.26
GTF3C1-206ENST00000566779 TIMM9Q9Y5J7 89 aa7.21□□□□□ -1.26
GTF3C1-206ENST00000566779 DNAH1Q9P2D7 4330 aa7.21□□□□□ -1.26
GTF3C1-206ENST00000566779 NACAE9PAV3 2078 aa7.21□□□□□ -1.26
GTF3C1-206ENST00000566779 M0R2N4 97 aa7.2□□□□□ -1.26
GTF3C1-206ENST00000566779 AZU1P20160 251 aa7.2□□□□□ -1.26
GTF3C1-206ENST00000566779 CDKN1BP46527 198 aa7.2□□□□□ -1.26
GTF3C1-206ENST00000566779 RPL29P47914 159 aaKnown RBP7.2□□□□□ -1.26
GTF3C1-206ENST00000566779 FCN2Q15485 313 aa7.2□□□□□ -1.26
GTF3C1-206ENST00000566779 NMES1Q9C002 83 aa7.2□□□□□ -1.26
GTF3C1-206ENST00000566779 ZNF586Q9NXT0 402 aa7.2□□□□□ -1.26
GTF3C1-206ENST00000566779 IGLV2-18A0A075B6J9 118 aa7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 F5H768 121 aa7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 H0YIZ8 118 aa7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 M0R3E3 92 aa7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 MPDU1O75352 247 aa7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 OR10J4P0C629 311 aa7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 PET100P0DJ07 73 aa7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 TSPOP30536 169 aa7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 H2BFSP57053 126 aa7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 CYCSP99999 105 aaKnown RBP7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 ERCC8Q13216 396 aa7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 FAM122CQ6P4D5 195 aa7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 TMEM88Q6PEY1 159 aa7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 MIR17HGQ75NE6 70 aa7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 EXOC3-AS1Q8N2X6 119 aa7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 PPP1R1CQ8WVI7 109 aa7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 KCNIP2Q9NS61 270 aa7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 MBD2Q9UBB5 411 aa7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 BIRC6Q9NR09 4857 aa7.19□□□□□ -1.26
GTF3C1-206ENST00000566779 TRAV12-3A0A0B4J271 114 aa7.18□□□□□ -1.26
GTF3C1-206ENST00000566779 C17orf112F2Z3M2 114 aa7.18□□□□□ -1.26
GTF3C1-206ENST00000566779 OR7C2O60412 319 aa7.18□□□□□ -1.26
GTF3C1-206ENST00000566779 P0DMU3 169 aa7.18□□□□□ -1.26
GTF3C1-206ENST00000566779 FAM231AP0DMU4 169 aa7.18□□□□□ -1.26
GTF3C1-206ENST00000566779 FAM231CP0DMU5 169 aa7.18□□□□□ -1.26
GTF3C1-206ENST00000566779 GYPEP15421 78 aa7.18□□□□□ -1.26
GTF3C1-206ENST00000566779 LEPP41159 167 aa7.18□□□□□ -1.26
GTF3C1-206ENST00000566779 GUK1Q16774 197 aa7.18□□□□□ -1.26
GTF3C1-206ENST00000566779 GFI1BQ5VTD9 330 aa7.18□□□□□ -1.26
GTF3C1-206ENST00000566779 TMEM256Q8N2U0 113 aa7.18□□□□□ -1.26
GTF3C1-206ENST00000566779 C16orf74Q96GX8 76 aa7.18□□□□□ -1.26
GTF3C1-206ENST00000566779 ATP5SQ99766 215 aa7.18□□□□□ -1.26
GTF3C1-206ENST00000566779 SLC25A2Q9BXI2 301 aa7.18□□□□□ -1.26
GTF3C1-206ENST00000566779 AAMDCQ9H7C9 122 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms