RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 WDR83OSQ9Y284 106 aa10.67□□□□□ -0.7
SMPD3-208ENST00000566723 UBE2L5PA0A1B0GUS4 154 aa10.66□□□□□ -0.7
SMPD3-208ENST00000566723 FAM24AA6NFZ4 105 aa10.66□□□□□ -0.7
SMPD3-208ENST00000566723 PRAC2D3DTV9 90 aa10.66□□□□□ -0.7
SMPD3-208ENST00000566723 H3BQ15 152 aa10.66□□□□□ -0.7
SMPD3-208ENST00000566723 PVALBP20472 110 aaPredicted RBP10.66□□□□□ -0.7
SMPD3-208ENST00000566723 S100A10P60903 97 aa10.66□□□□□ -0.7
SMPD3-208ENST00000566723 KIR3DS1Q14943 382 aa10.66□□□□□ -0.7
SMPD3-208ENST00000566723 VWC2Q2TAL6 325 aa10.66□□□□□ -0.7
SMPD3-208ENST00000566723 C1orf134Q5TEV5 83 aa10.66□□□□□ -0.7
SMPD3-208ENST00000566723 GFI1BQ5VTD9 330 aa10.66□□□□□ -0.7
SMPD3-208ENST00000566723 OR1L4Q8NGR5 311 aa10.66□□□□□ -0.7
SMPD3-208ENST00000566723 SAT2Q96F10 170 aaPredicted RBP10.66□□□□□ -0.7
SMPD3-208ENST00000566723 C2orf50Q96LR7 162 aa10.66□□□□□ -0.7
SMPD3-208ENST00000566723 PFDN5Q99471 154 aa10.66□□□□□ -0.7
SMPD3-208ENST00000566723 CCDC32Q9BV29 185 aa10.66□□□□□ -0.7
SMPD3-208ENST00000566723 PARD6GQ9BYG4 376 aaPredicted RBP10.66□□□□□ -0.7
SMPD3-208ENST00000566723 NOP10Q9NPE3 64 aaKnown RBP10.66□□□□□ -0.7
SMPD3-208ENST00000566723 LYRM2Q9NU23 88 aaPredicted RBP10.66□□□□□ -0.7
SMPD3-208ENST00000566723 NDUFA13Q9P0J0 144 aa10.66□□□□□ -0.7
SMPD3-208ENST00000566723 NUDT3O95989 172 aa10.65□□□□□ -0.7
SMPD3-208ENST00000566723 H2AFB2P0C5Z0 115 aa10.65□□□□□ -0.7
SMPD3-208ENST00000566723 MED14OSP0DP75 135 aa10.65□□□□□ -0.7
SMPD3-208ENST00000566723 SULT1A1P50225 295 aa10.65□□□□□ -0.7
SMPD3-208ENST00000566723 GUK1Q16774 197 aa10.65□□□□□ -0.7
SMPD3-208ENST00000566723 ODF3Q96PU9 254 aa10.65□□□□□ -0.7
SMPD3-208ENST00000566723 IGSF23A1L1A6 192 aa10.64□□□□□ -0.71
SMPD3-208ENST00000566723 S100A11P31949 105 aa10.64□□□□□ -0.71
SMPD3-208ENST00000566723 RPL29P47914 159 aaKnown RBP10.64□□□□□ -0.71
SMPD3-208ENST00000566723 HBG1P69891 147 aa10.64□□□□□ -0.71
SMPD3-208ENST00000566723 HBG2P69892 147 aa10.64□□□□□ -0.71
SMPD3-208ENST00000566723 BAXQ07812 192 aa10.64□□□□□ -0.71
SMPD3-208ENST00000566723 STX12Q86Y82 276 aa10.64□□□□□ -0.71
SMPD3-208ENST00000566723 TRAV5A0A0B4J249 113 aa10.63□□□□□ -0.71
SMPD3-208ENST00000566723 NPIPB6E9PJ23 425 aa10.63□□□□□ -0.71
SMPD3-208ENST00000566723 ZNF253O75346 499 aa10.63□□□□□ -0.71
SMPD3-208ENST00000566723 LEPP41159 167 aa10.63□□□□□ -0.71
SMPD3-208ENST00000566723 IL15RAQ13261 267 aa10.63□□□□□ -0.71
SMPD3-208ENST00000566723 RAB32Q13637 225 aa10.63□□□□□ -0.71
SMPD3-208ENST00000566723 CCDC28AQ8IWP9 274 aa10.63□□□□□ -0.71
SMPD3-208ENST00000566723 TMEM252Q8N6L7 170 aa10.63□□□□□ -0.71
SMPD3-208ENST00000566723 LINC00612Q8N6U2 182 aa10.63□□□□□ -0.71
SMPD3-208ENST00000566723 ZNRF2Q8NHG8 242 aa10.63□□□□□ -0.71
SMPD3-208ENST00000566723 RNF141Q8WVD5 230 aa10.63□□□□□ -0.71
SMPD3-208ENST00000566723 SLC39A9Q9NUM3 307 aa10.63□□□□□ -0.71
SMPD3-208ENST00000566723 ZNF586Q9NXT0 402 aa10.63□□□□□ -0.71
SMPD3-208ENST00000566723 FAM240BA0A1B0GVZ2 78 aa10.62□□□□□ -0.71
SMPD3-208ENST00000566723 CT45A10P0DMU9 189 aa10.62□□□□□ -0.71
SMPD3-208ENST00000566723 FGF7P21781 194 aa10.62□□□□□ -0.71
SMPD3-208ENST00000566723 CCL18P55774 89 aa10.62□□□□□ -0.71
SMPD3-208ENST00000566723 CHAC2Q8WUX2 184 aa10.62□□□□□ -0.71
SMPD3-208ENST00000566723 MRPL53Q96EL3 112 aaKnown RBP10.62□□□□□ -0.71
SMPD3-208ENST00000566723 TRBV19A0A075B6N1 114 aa10.61□□□□□ -0.71
SMPD3-208ENST00000566723 NBDYA0A0U1RRE5 68 aa10.61□□□□□ -0.71
SMPD3-208ENST00000566723 SNURFLB1AK76 121 aa10.61□□□□□ -0.71
SMPD3-208ENST00000566723 J3KRW8 73 aa10.61□□□□□ -0.71
SMPD3-208ENST00000566723 ATP6V1FQ16864 119 aa10.61□□□□□ -0.71
SMPD3-208ENST00000566723 GPN1Q9HCN4 374 aaPredicted RBP10.61□□□□□ -0.71
SMPD3-208ENST00000566723 TMEM14CQ9P0S9 112 aa10.61□□□□□ -0.71
SMPD3-208ENST00000566723 LINC00588Q9Y4M8 146 aa10.61□□□□□ -0.71
SMPD3-208ENST00000566723 HSPG2P98160 4391 aa10.61□□□□□ -0.71
SMPD3-208ENST00000566723 ABCA13Q86UQ4 5058 aa10.6□□□□□ -0.71
SMPD3-208ENST00000566723 LRP1BQ9NZR2 4599 aa10.6□□□□□ -0.71
SMPD3-208ENST00000566723 TRAV12-3A0A0B4J271 114 aa10.6□□□□□ -0.71
SMPD3-208ENST00000566723 MPDU1O75352 247 aa10.6□□□□□ -0.71
SMPD3-208ENST00000566723 RLN2P04090 185 aa10.6□□□□□ -0.71
SMPD3-208ENST00000566723 PDE6HQ13956 83 aa10.6□□□□□ -0.71
SMPD3-208ENST00000566723 CLINT1Q14677 625 aa10.6□□□□□ -0.71
SMPD3-208ENST00000566723 MZT2BQ6NZ67 158 aa10.6□□□□□ -0.71
SMPD3-208ENST00000566723 PYGO2Q9BRQ0 406 aa10.6□□□□□ -0.71
SMPD3-208ENST00000566723 GAGE12BA1L429 117 aa10.59□□□□□ -0.71
SMPD3-208ENST00000566723 M0R3E3 92 aa10.59□□□□□ -0.71
SMPD3-208ENST00000566723 GAGE7O76087 117 aa10.59□□□□□ -0.71
SMPD3-208ENST00000566723 GAGE12FP0CL80 117 aa10.59□□□□□ -0.71
SMPD3-208ENST00000566723 GAGE12GP0CL81 117 aa10.59□□□□□ -0.71
SMPD3-208ENST00000566723 GAGE12IP0CL82 117 aa10.59□□□□□ -0.71
SMPD3-208ENST00000566723 HIST1H1EP10412 219 aaKnown RBP10.59□□□□□ -0.71
SMPD3-208ENST00000566723 M6PRP20645 277 aa10.59□□□□□ -0.71
SMPD3-208ENST00000566723 ASAH1Q13510 395 aa10.59□□□□□ -0.71
SMPD3-208ENST00000566723 OR5I1Q13606 314 aa10.59□□□□□ -0.71
SMPD3-208ENST00000566723 LINC00299Q6ZSB3 139 aa10.59□□□□□ -0.71
SMPD3-208ENST00000566723 ZNF575Q86XF7 245 aa10.59□□□□□ -0.71
SMPD3-208ENST00000566723 C6orf223Q8N319 242 aa10.59□□□□□ -0.71
SMPD3-208ENST00000566723 GNPNAT1Q96EK6 184 aaPredicted RBP10.59□□□□□ -0.71
SMPD3-208ENST00000566723 NPCDR1Q9BY65 106 aa10.59□□□□□ -0.71
SMPD3-208ENST00000566723 PRELID1Q9Y255 219 aa10.59□□□□□ -0.71
SMPD3-208ENST00000566723 TRAV26-1A0A087WT03 109 aa10.58□□□□□ -0.72
SMPD3-208ENST00000566723 C7orf71A4D174 169 aa10.58□□□□□ -0.72
SMPD3-208ENST00000566723 NDUFB4O95168 129 aa10.58□□□□□ -0.72
SMPD3-208ENST00000566723 SLC25A5P05141 298 aaKnown RBP10.58□□□□□ -0.72
SMPD3-208ENST00000566723 PYYP10082 97 aa10.58□□□□□ -0.72
SMPD3-208ENST00000566723 DAZ2Q13117 558 aaKnown RBP10.58□□□□□ -0.72
SMPD3-208ENST00000566723 GCSAMLQ5JQS6 135 aa10.58□□□□□ -0.72
SMPD3-208ENST00000566723 SSX7Q7RTT5 188 aa10.58□□□□□ -0.72
SMPD3-208ENST00000566723 RXFP4Q8TDU9 374 aa10.58□□□□□ -0.72
SMPD3-208ENST00000566723 ZNF503Q96F45 646 aa10.58□□□□□ -0.72
SMPD3-208ENST00000566723 TIMM9Q9Y5J7 89 aa10.58□□□□□ -0.72
SMPD3-208ENST00000566723 KLLNB2CW77 178 aa10.57□□□□□ -0.72
SMPD3-208ENST00000566723 HOXA5P20719 270 aa10.57□□□□□ -0.72
SMPD3-208ENST00000566723 TNP2Q05952 138 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms